FC873234

Overview
NameFC873234
Unique NameFC873234
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length167
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1089 contig Ccv1_Contig1089:126..292. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873234 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.696e-13
Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 2
Query:    2 TYYGSPDGLGTPTGACGFGGYGRTVNDANEAGVS-RL*NNGTGCGTCYHDRCAVP 163
            TYYGSPD    P G CG+G +GR +N+   +GVS RL NNGTGCG CY  RC +P
Sbjct:   33 TYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIP 87          
The following BLAST results are available for this feature:
BLAST of FC873234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
EXLB1_ARATH4.696e-1358.18Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI1AH12FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873234 ID=FC873234; Name=FC873234; organism=Citrus clementina; type=EST; length=167bp
TACATACTATGGTAGCCCTGACGGCTTGGGGACACCAACTGGTGCTTGCG
GGTTTGGTGGATATGGAAGAACTGTAAATGATGCTAACGAGGCCGGTGTG
TCGAGGCTTTGAAATAATGGAACTGGTTGTGGAACTTGCTATCATGACAG
ATGCGCTGTACCAGAAG
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