FC873262

Overview
NameFC873262
Unique NameFC873262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10140 contig Ccv1_Contig10140:1..507. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: COQ3_ARATH (Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial OS=Arabidopsis thaliana GN=COQ3 PE=2 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 2.044e-53
Identity = 97/126 (76.98%), Postives = 116/126 (92.06%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            EKL +E RKFDAV++ EVIEHVA+PAEFCKSLSALT+  GATV+STINR++RAYA+ I+ AE+IL WLPKGTHQWSSF+TPEE+ +ILQRAS+DVKE+AGFVYNP+TGRW LSDDISVN+IA+GTK
Sbjct:  190 EKLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLSTINRTMRAYASTIVGAEYILRWLPKGTHQWSSFVTPEEMSMILQRASVDVKEIAGFVYNPITGRWLLSDDISVNYIAYGTK 315          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_SILST (3-demethylubiquinone-9 3-methyltransferase OS=Silicibacter sp. (strain TM1040) GN=ubiG PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.511e-29
Identity = 57/128 (44.53%), Postives = 87/128 (67.97%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAFGTKN 403
            E + E   +FD V+  EV+EHVADP  +  +   L  S G  + STINR+ ++YA AI  AE ++ WLP+GTH+WS F+TP+EL  +L++A ++  +  GFV+NP+  +WS+SD D+SVN++   TK+
Sbjct:  120 EAMAEAGEQFDVVLNMEVVEHVADPLSYLTATQQLLKSGGLQICSTINRNPKSYAMAIFGAEVVMRWLPRGTHEWSKFITPDELFALLEQAGLNPVDRKGFVFNPILWKWSISDRDLSVNYVTASTKS 247          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHOP5 (3-demethylubiquinone-9 3-methyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=ubiG PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.972e-28
Identity = 55/122 (45.08%), Postives = 83/122 (68.03%), Query Frame = 2
Query:   20 TEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            T + ++ + +FD V+A EVIEHV D   F    +A+    G  V++T+NR+ +++A AI+ AE+++ WLP+GTHQW  F+TPEEL   LQ + + V E AG VYNPL  +W+LS D+ VN++
Sbjct:  125 TAEAMDPRERFDIVLAMEVIEHVTDVGAFLGRCAAMMKPTGLMVVATLNRNWKSFALAIVGAEYVMRWLPRGTHQWDKFVTPEELTRHLQNSRLAVTEQAGLVYNPLADKWNLSADMDVNYM 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHOPB (3-demethylubiquinone-9 3-methyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=ubiG PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 6.621e-28
Identity = 55/122 (45.08%), Postives = 82/122 (67.21%), Query Frame = 2
Query:   20 TEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            T + ++ + +FD V+A EVIEHV D   F    +A+T   G  V++T+NR+ +++A AI+ AE+++ WLP+GTHQW  F+TP+EL   L    + V E AG VYNPL  +WSLS D+ VN++
Sbjct:  125 TVEQMDPRERFDIVLAMEVIEHVTDVGAFLARCAAITKPGGLMVVATLNRNWKSFALAIVGAEYVMRWLPRGTHQWDKFVTPDELTKHLHNNKLAVTEQAGLVYNPLADKWSLSADMDVNYM 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_SILPO (3-demethylubiquinone-9 3-methyltransferase OS=Silicibacter pomeroyi GN=ubiG PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.129e-27
Identity = 55/122 (45.08%), Postives = 85/122 (69.67%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 385
            E L E   +FD V+  EV+EHVADP  + ++   L    G  + STINR+ ++YA AI+ AE ++ WLP+GTH WS F+TP+EL  +L++A ++  +  GFV+NP++ +WS+SD D+SVN++
Sbjct:  120 EALAEAGEQFDVVLNMEVVEHVADPLSYLRATHDLLKPGGLQICSTINRNPKSYAMAILGAEVVMRWLPRGTHDWSKFITPDELFDLLRQAGLEPVDRKGFVFNPISWQWSISDRDLSVNYV 241          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_ROSDO (3-demethylubiquinone-9 3-methyltransferase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=ubiG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.516e-27
Identity = 56/127 (44.09%), Postives = 83/127 (65.35%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAFGTK 400
            E L  E  +FD V+  EV+EHVA P ++  +   L    G  V ST+NR+ ++Y  AII AEH++ WLPKGTH+WS F+TP+EL  +L+++ +D  +  GFV+NP++  W LS  D+SVN++    K
Sbjct:  120 EALAAEGEQFDVVLNMEVVEHVASPIDYLIACRQLLKPGGLQVCSTLNRNPKSYVMAIIGAEHVMRWLPKGTHEWSKFITPDELYDLLRQSGMDPVDRKGFVFNPISWSWKLSGRDLSVNYVTASVK 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_DINSH (3-demethylubiquinone-9 3-methyltransferase OS=Dinoroseobacter shibae (strain DFL 12) GN=ubiG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.516e-27
Identity = 56/122 (45.90%), Postives = 84/122 (68.85%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 385
            E LV    +FD+V+  EV+EHVADP  +  +   L    G  + ST+NR+ +++A AI+ AE++L WLPKGTH W  FLTP+EL  +L++A ++  +  G V+NPL+ +WSLSD D+SVN++
Sbjct:  120 EALVAAGEQFDSVLNMEVVEHVADPLAYLTACKDLLKPGGIMLCSTLNRNPKSFAMAIVGAEYVLKWLPKGTHDWRKFLTPDELTKLLEQAGLEPVDKKGMVFNPLSQQWSLSDRDLSVNYV 241          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_JANSC (3-demethylubiquinone-9 3-methyltransferase OS=Jannaschia sp. (strain CCS1) GN=ubiG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 5.605e-27
Identity = 54/127 (42.52%), Postives = 82/127 (64.57%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAFGTK 400
            E + +   +FD V+  EV+EHV DP  +  +   L    G  V ST+NR+ ++Y  AII AEH++ WLPKGTH+WS F+TP+EL  ++++A +D  +  GFV+NPL   W +S+ D+SVN++    K
Sbjct:  126 EAMADAGEQFDVVLNMEVVEHVVDPLGYLTACQRLLKPGGLMVCSTLNRNPKSYLMAIIGAEHVMRWLPKGTHEWSKFITPDELFDLIRQAGLDPVDRKGFVFNPLLWTWGISERDMSVNYVTASVK 252          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_AZOC5 (3-demethylubiquinone-9 3-methyltransferase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=ubiG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 5.605e-27
Identity = 51/124 (41.13%), Postives = 80/124 (64.52%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 394
            E+L +   +FD V+A EV+EHVAD   F +    +    G  ++ST+NR+V+++A AI+ AE++L WLP+GTH+W  F+TP EL   +  A  ++ E+AG V++PL G W ++ D  VN+   G
Sbjct:  121 EELADAGERFDVVLALEVVEHVADVGLFLRRAGEMVNPNGIMIVSTLNRTVKSFALAIVGAEYVLRWLPRGTHRWDKFITPAELEAEMGAAGFEMSELAGMVFDPLRGEWKIAADTDVNYFLVG 244          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHOPT (3-demethylubiquinone-9 3-methyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=ubiG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.320e-27
Identity = 53/118 (44.92%), Postives = 78/118 (66.10%), Query Frame = 2
Query:   32 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            ++ + +FD V+A EVIEHV D   F    +AL    G  V++T+NR+ +++A AI+ AE+++ WLP+GTHQW  F+TP EL   L R  + V E +G V+NPL  RW LS D+ VN++
Sbjct:  129 IDPRERFDIVLAMEVIEHVTDVGAFLSRCAALMKPTGIMVVATLNRNWKSFALAIVGAEYVMRWLPRGTHQWDKFVTPAELEQHLNRLKLIVTEQSGLVFNPLADRWKLSPDMDVNYM 246          
The following BLAST results are available for this feature:
BLAST of FC873262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
COQ3_ARATH2.044e-5376.98Hexaprenyldihydroxybenzoate methyltransferase, mit... [more]
UBIG_SILST3.511e-2944.533-demethylubiquinone-9 3-methyltransferase OS=Sili... [more]
UBIG_RHOP52.972e-2845.083-demethylubiquinone-9 3-methyltransferase OS=Rhod... [more]
UBIG_RHOPB6.621e-2845.083-demethylubiquinone-9 3-methyltransferase OS=Rhod... [more]
UBIG_SILPO1.129e-2745.083-demethylubiquinone-9 3-methyltransferase OS=Sili... [more]
UBIG_ROSDO2.516e-2744.093-demethylubiquinone-9 3-methyltransferase OS=Rose... [more]
UBIG_DINSH2.516e-2745.903-demethylubiquinone-9 3-methyltransferase OS=Dino... [more]
UBIG_JANSC5.605e-2742.523-demethylubiquinone-9 3-methyltransferase OS=Jann... [more]
UBIG_AZOC55.605e-2741.133-demethylubiquinone-9 3-methyltransferase OS=Azor... [more]
UBIG_RHOPT7.320e-2744.923-demethylubiquinone-9 3-methyltransferase OS=Rhod... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA01FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873262 ID=FC873262; Name=FC873262; organism=Citrus clementina; type=EST; length=507bp
CATAAATATAATTCCATGGACAGAGAAGCTCGTAGAGGAACAGAGGAAGT
TCGATGCTGTGATTGCTTCAGAGGTAATTGAGCATGTAGCAGATCCTGCT
GAATTCTGCAAGTCTTTGTCTGCATTAACCGTATCTGAGGGAGCTACAGT
GATTTCAACAATAAATCGTTCTGTGAGAGCATATGCAACTGCCATCATTG
CAGCAGAACACATCCTCCATTGGCTTCCAAAAGGTACACATCAGTGGTCA
AGTTTCCTTACTCCCGAAGAGCTCGTGCTAATTCTACAACGTGCTTCCAT
AGATGTTAAAGAGATGGCTGGATTTGTGTACAATCCTTTAACAGGAAGAT
GGTCTCTATCCGATGACATTAGTGTGAACTTCATCGCTTTTGGTACCAAA
AATAGCTAGTAACAGATAAACTCTTCTGTAGTAACACTCTCTCTAATGCA
GCTAATGCTGTGTAATAAATTTTGCTCCCAATCATTTAAAAAAAAAAAAA
AAAAAAA
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