FC873295

Overview
NameFC873295
Unique NameFC873295
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length464
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1097 contig Ccv1_Contig1097:1..464. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873295 vs. ExPASy Swiss-Prot
Match: PPP7_ARATH (Serine/threonine-protein phosphatase 7 OS=Arabidopsis thaliana GN=PP7 PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 1.111e-62
Identity = 110/153 (71.90%), Postives = 128/153 (83.66%), Query Frame = 2
Query:    2 PQLSSNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNPFYDXQNAIDSDEELE 460
            P   SNLIPGD+LWSDPSM  GLS N +RGIGLLWGPD TE+FLKK+ LKLIIRSHEGPDAR+KR  L GMDNGYTIDH+VESG  IT+FSAPDYPQFQATEER++NKGAYI+L+ P F  P F+ FEAV PRP  +P+YD +N IDSD+E++
Sbjct:  248 PWEGSNLIPGDVLWSDPSMTPGLSPNEQRGIGLLWGPDCTEDFLKKYELKLIIRSHEGPDAREKRTGLGGMDNGYTIDHNVESGKLITIFSAPDYPQFQATEERYKNKGAYIILQAPDFSDPQFHSFEAVKPRPKAHPYYDFENVIDSDDEMD 400          
BLAST of FC873295 vs. ExPASy Swiss-Prot
Match: PPP7L_ARATH (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana GN=At1g48120 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.908e-38
Identity = 84/152 (55.26%), Postives = 99/152 (65.13%), Query Frame = 2
Query:    2 PQLSSNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNPFYDXQNAIDSDEEL 457
            P   SNLIPGD+LWSDPS   GL  N ERGIGLLWGPD T +FL+  +LK IIR    PD R KR DLA M+ GY  DH+   G+ ITLFSAPD+PQFQ TEER  NK AYI+L+ P+ +   F   EAV+PRP    +YD +  I     L
Sbjct:  835 PTEGSNLIPGDILWSDPSKDTGLFLNKERGIGLLWGPDCTAKFLQDNNLKWIIRGKGAPDERAKRDDLAPMNGGYAEDHE---GL-ITLFSAPDHPQFQDTEERHNNKAAYIILQIPECEELKFQPLEAVSPRPKAEAYYDFRRLIHPPSNL 982          
BLAST of FC873295 vs. ExPASy Swiss-Prot
Match: PPP7I_ARATH (Serine/threonine-protein phosphatase 7 inactive homolog OS=Arabidopsis thaliana GN=At5g10900 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.852e-25
Identity = 61/119 (51.26%), Postives = 77/119 (64.71%), Query Frame = 2
Query:   17 NLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDF 373
            N+    +LWS P M  GLSE+  +G  LLWG D TE FL++ +LK+IIRSHEGPDAR  R D+  M +GY+IDH+VESG   T+FSA     F      + N+GAY VL+PP F  P F
Sbjct:  384 NITLNHVLWSCPWMADGLSESNYKG--LLWGADCTETFLQQSNLKMIIRSHEGPDARADREDMGNMLSGYSIDHEVESGKLCTVFSA---SMFSQGSRNYENEGAYAVLEPPNFTEPVF 497          
BLAST of FC873295 vs. ExPASy Swiss-Prot
Match: PPE1_MOUSE (Serine/threonine-protein phosphatase with EF-hands 1 OS=Mus musculus GN=Ppef1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.277e-14
Identity = 55/138 (39.86%), Postives = 72/138 (52.17%), Query Frame = 2
Query:   32 DLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNPFYDXQNAIDS 445
            D+LWSDP  K G   NT RG G  +GPD T + L K  LK++IRSHE       +PD      GY + HD   G  IT+FSA +Y       E   N+GAYI L      +P F  ++ VT    +NP +   NA++S
Sbjct:  359 DILWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLSKNQLKMLIRSHE------CKPD------GYEVSHD---GKVITVFSASNY------YEEGSNRGAYIRLS--YGTMPQFFQYQ-VTSTSCLNPLHQRMNAMES 472          
BLAST of FC873295 vs. ExPASy Swiss-Prot
Match: PPP5_SOLLC (Serine/threonine-protein phosphatase 5 OS=Solanum lycopersicum GN=PP5 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.301e-14
Identity = 51/128 (39.84%), Postives = 71/128 (55.47%), Query Frame = 2
Query:   32 DLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNP 415
            +LLWSDP  + G   + +RG+GL +G D T+ FL++ +L L++RSHE              D GY I+HD   G  IT+FSAP+Y       ++  NKGA+I  + P    P+   F AV P PDV P
Sbjct:  441 ELLWSDPQPQPGRGPS-KRGVGLSFGGDVTKRFLQENNLDLVVRSHE------------VKDEGYEIEHD---GKLITVFSAPNYC------DQMGNKGAFIRFEAPDMK-PNIVTFSAV-PHPDVKP 544          
BLAST of FC873295 vs. ExPASy Swiss-Prot
Match: PPE1_RAT (Serine/threonine-protein phosphatase with EF-hands 1 OS=Rattus norvegicus GN=Ppef1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.301e-14
Identity = 57/137 (41.61%), Postives = 70/137 (51.09%), Query Frame = 2
Query:   32 DLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNPFYDXQNAID 442
            DLLWSDP  K G   NT RG G  +GPD T + L K  LK++IRSHE       +PD      GY I HD   G  IT+FSA +Y       E   N+GAYI L       P F  ++ VT    +NP Y   NA++
Sbjct:  348 DLLWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLNKNQLKMVIRSHE------CKPD------GYEICHD---GKVITVFSASNY------YEEGSNRGAYIRLS--YGTSPQFFQYQ-VTSTSCLNPLYQRVNAME 460          
BLAST of FC873295 vs. ExPASy Swiss-Prot
Match: PPP5_ARATH (Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana GN=PAPP5 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.732e-13
Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 2
Query:   32 DLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNP 415
            +LLWSDP    G   + +RG+GL +G D T+ FL+  +L L++RSHE              D GY ++HD   G  IT+FSAP+Y       ++  NKGA+I  + P    P+   F AV P PDV P
Sbjct:  423 ELLWSDPQPLPGRGPS-KRGVGLSFGGDVTKRFLQDNNLDLLVRSHE------------VKDEGYEVEHD---GKLITVFSAPNYC------DQMGNKGAFIRFEAPDMK-PNIVTFSAV-PHPDVKP 526          
BLAST of FC873295 vs. ExPASy Swiss-Prot
Match: PPT1_SCHPO (Serine/threonine-protein phosphatase T OS=Schizosaccharomyces pombe GN=ppt1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 5.232e-12
Identity = 49/129 (37.98%), Postives = 70/129 (54.26%), Query Frame = 2
Query:   32 DLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIP-DFNVFEAVTPRPDVNP 415
            ++LW+DP    G   + +RG+GL +GPD ++ F +   LK +IRSHE              D GY ++HD   G CIT+FSAP+Y       +   N GA I +K    D+  DF+ FEAV P P++ P
Sbjct:  360 EMLWTDPQPAPGRGPS-KRGVGLQFGPDVSKRFCEANGLKAVIRSHE------------VRDQGYEVEHD---GYCITVFSAPNYC------DSTGNLGAVIKVKE---DMELDFHQFEAV-PHPNIRP 462          
BLAST of FC873295 vs. ExPASy Swiss-Prot
Match: PPE1_HUMAN (Serine/threonine-protein phosphatase with EF-hands 1 OS=Homo sapiens GN=PPEF1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.924e-12
Identity = 45/104 (43.27%), Postives = 57/104 (54.81%), Query Frame = 2
Query:   32 DLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVL 343
            D+LWSDP  K G   NT RG G  +GPD T + L K+ LK++IRSHE       +P+      GY I HD   G  +T+FSA +Y       E   N+GAYI L
Sbjct:  358 DILWSDPRGKNGCFPNTCRGGGCYFGPDVTSKILNKYQLKMLIRSHE------CKPE------GYEICHD---GKVVTIFSASNY------YEEGSNRGAYIKL 440          
BLAST of FC873295 vs. ExPASy Swiss-Prot
Match: PPP5_RAT (Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus GN=Ppp5c PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.522e-11
Identity = 49/128 (38.28%), Postives = 67/128 (52.34%), Query Frame = 2
Query:   32 DLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNP 415
            DLLWSDP  + G S + +RG+   +GPD T+ FL++  L  IIRSHE                GY + H    G C+T+FSAP+Y       ++  NK +YI L+      P F+ F AV P P+V P
Sbjct:  383 DLLWSDPQPQNGRSVS-KRGVSCQFGPDVTKAFLEENQLDYIIRSHE------------VKAEGYEVAH---GGRCVTVFSAPNYC------DQMGNKASYIHLQGSDLR-PQFHQFTAV-PHPNVKP 486          
The following BLAST results are available for this feature:
BLAST of FC873295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
PPP7_ARATH1.111e-6271.90Serine/threonine-protein phosphatase 7 OS=Arabidop... [more]
PPP7L_ARATH1.908e-3855.26Serine/threonine-protein phosphatase 7 long form h... [more]
PPP7I_ARATH1.852e-2551.26Serine/threonine-protein phosphatase 7 inactive ho... [more]
PPE1_MOUSE3.277e-1439.86Serine/threonine-protein phosphatase with EF-hands... [more]
PPP5_SOLLC7.301e-1439.84Serine/threonine-protein phosphatase 5 OS=Solanum ... [more]
PPE1_RAT7.301e-1441.61Serine/threonine-protein phosphatase with EF-hands... [more]
PPP5_ARATH4.732e-1339.06Serine/threonine-protein phosphatase 5 OS=Arabidop... [more]
PPT1_SCHPO5.232e-1237.98Serine/threonine-protein phosphatase T OS=Schizosa... [more]
PPE1_HUMAN8.924e-1243.27Serine/threonine-protein phosphatase with EF-hands... [more]
PPP5_RAT1.522e-1138.28Serine/threonine-protein phosphatase 5 OS=Rattus n... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BD03FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873295 ID=FC873295; Name=FC873295; organism=Citrus clementina; type=EST; length=464bp
CCCGCAGCTCAGTTCAAACTTGATTCCGGGTGATCTTCTCTGGTCAGATC
CATCAATGAAACTTGGTCTTTCTGAAAATACTGAAAGAGGCATCGGTCTG
TTATGGGGTCCTGATAGCACCGAGGAGTTCTTAAAAAAGTTTAGTCTAAA
GTTAATTATTAGATCACATGAAGGGCCAGATGCAAGACAAAAAAGACCTG
ATTTAGCAGGAATGGATAATGGCTACACAATAGATCATGACGTAGAATCA
GGGATGTGTATCACTCTGTTTAGTGCTCCAGACTACCCACAATTTCAGGC
AACAGAAGAAAGGTTCAGGAACAAGGGGGCTTATATTGTATTAAAACCTC
CTAAATTTGACATTCCAGACTTTAATGTTTTTGAAGCAGTCACTCCAAGA
CCAGATGTCAATCCCTTTTATGACTTNCAGAATGCGATAGACTCCGATGA
GGAGTTGGAGTTGG
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