FC873351

Overview
NameFC873351
Unique NameFC873351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7997 contig Ccv1_Contig7997:229..963. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: GCN5_ARATH (Histone acetyltransferase GCN5 OS=Arabidopsis thaliana GN=HAG1 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.481e-61
Identity = 107/147 (72.79%), Postives = 124/147 (84.35%), Query Frame = 3
Query:    3 KVEDIPGLREAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQSGLHSSTKIQ 443
            KVE+I GLREAGWTPDQWGH+RF+    + D  +NQK L A MR+LLK+M DH DAWPFKEPVD+RDVPDYY+IIKDP+DL+ ++KRVESEQYYVT +MFVAD +RMF N RTYNSPDTIYYKCATRLE+HF SKVQ+GL S  K Q
Sbjct:  422 KVEEIRGLREAGWTPDQWGHTRFKLFNGSADMVTNQKQLNALMRALLKTMQDHADAWPFKEPVDSRDVPDYYDIIKDPIDLKVIAKRVESEQYYVTLDMFVADARRMFNNCRTYNSPDTIYYKCATRLETHFHSKVQAGLQSGAKSQ 568          
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: GCN5_ORYSJ (Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica GN=GCN5 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.174e-56
Identity = 106/146 (72.60%), Postives = 126/146 (86.30%), Query Frame = 3
Query:    3 KVEDIPGLREAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQSGL-HSSTK 437
            K EDI GLREAGWTPDQWGHS+ R+   + D ++ ++ LT  MRSLLK+M++H DAWPFKEPVD+RDVPDYY+IIKDP+DL+TMSKRVESEQYYVT EMFVAD+KRMF+NA+TYNSPDTIYYKCA+RLES F +KV S L  +STK
Sbjct:  366 KPEDIQGLREAGWTPDQWGHSKSRS-AFSPDYSTYRQQLTNLMRSLLKNMNEHPDAWPFKEPVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKTYNSPDTIYYKCASRLESFFSNKVASQLAQASTK 510          
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: KAT2A_HUMAN (Histone acetyltransferase KAT2A OS=Homo sapiens GN=KAT2A PE=1 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 3.447e-26
Identity = 59/138 (42.75%), Postives = 87/138 (63.04%), Query Frame = 3
Query:    6 VEDIPGLREAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQSG 419
            VE +PG+RE GW P   G  + + L        +   L   +++LL  +  H  AWPF EPV   + PDYYE+I+ P+DL+TM++R+ S +YYVT ++FVAD++R+ AN R YN PD+ Y +CA+ LE  F  K++ G
Sbjct:  705 VESVPGIRETGWKP--LGKEKGKEL-------KDPDQLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRS-RYYVTRKLFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFKLKEG 832          
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: KAT2B_MOUSE (Histone acetyltransferase KAT2B OS=Mus musculus GN=Kat2b PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.501e-26
Identity = 55/136 (40.44%), Postives = 90/136 (66.18%), Query Frame = 3
Query:    6 VEDIPGLREAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQ 413
            +E IPG+RE GW P     S+            + + L + ++++L+ + +H +AWPF EPV   + P YYE+I+ PMDL+TMS+R+ + +YYV+ ++F+AD++R+F N + YN P++ YYKCA+ LE  F SK++
Sbjct:  681 IESIPGIRETGWKPSGKEKSK---------EPKDPEQLYSTLKNILQQVKNHPNAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLRN-RYYVSKKLFMADLQRVFTNCKEYNPPESEYYKCASILEKFFFSKIK 806          
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: KAT2B_HUMAN (Histone acetyltransferase KAT2B OS=Homo sapiens GN=KAT2B PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 7.678e-26
Identity = 56/136 (41.18%), Postives = 87/136 (63.97%), Query Frame = 3
Query:    6 VEDIPGLREAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQ 413
            +E IPG+RE GW P     S+            +   L + ++S+L+ +  H  AWPF EPV   + P YYE+I+ PMDL+TMS+R+++ +YYV+ ++F+AD++R+F N + YN P++ YYKCA  LE  F SK++
Sbjct:  700 IESIPGIRETGWKPSGKEKSK---------EPRDPDQLYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKN-RYYVSKKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIK 825          
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: KAT2A_MOUSE (Histone acetyltransferase KAT2A OS=Mus musculus GN=Kat2a PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.811e-25
Identity = 57/138 (41.30%), Postives = 87/138 (63.04%), Query Frame = 3
Query:    6 VEDIPGLREAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQSG 419
            VE +PG+RE GW P   G  + + L        +   L   +++LL  +  H  AWPF EPV   + PDYYE+I+ P+DL+TM++R+ S +YYVT ++FVAD++R+ AN R YN P++ Y +CA+ L+  F  K++ G
Sbjct:  698 VESVPGIRETGWKP--LGKEKGKEL-------KDPDQLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRS-RYYVTRKLFVADLQRVIANCREYNPPNSEYCRCASALKKFFYFKLKEG 825          
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: GCN5_YEAST (Histone acetyltransferase GCN5 OS=Saccharomyces cerevisiae GN=GCN5 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.731e-23
Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   15 IPGLREAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQ 413
            IPGL+EAGWTP+         + A         H  A ++++L  + +H  AWPF +PV+  +VPDYY+ IK+PMDL TM  ++ES +Y    E F+ D + +F N R YN  +T YYK A RLE  F +KV+
Sbjct:  308 IPGLKEAGWTPE---------MDALAQRPKRGPH-DAAIQNILTELQNHAAAWPFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLESNKYQ-KMEDFIYDARLVFNNCRMYNGENTSYYKYANRLEKFFNNKVK 429          
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: GCN5_YARLI (Histone acetyltransferase GCN5 OS=Yarrowia lipolytica GN=GCN5 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.946e-23
Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   15 IPGLREAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQ 413
            IPGL+EAGWTP+    +R               H  A M+ +L  + +H  AWPF + V+  +VPDYYE+IK+PMDL TM +R+E++  Y T E FV D + +F N R YN+  T YYK A +LE    +K++
Sbjct:  333 IPGLKEAGWTPEMDELAR---------RPKRGPHF-AVMQHVLSELQNHASAWPFAQAVNRDEVPDYYEVIKEPMDLSTMEQRLEADS-YKTMEEFVYDARLVFNNCRAYNNETTTYYKNANKLEKFMVAKIK 454          
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: GCN5_KLULA (Histone acetyltransferase GCN5 OS=Kluyveromyces lactis GN=GCN5 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.038e-22
Identity = 55/133 (41.35%), Postives = 76/133 (57.14%), Query Frame = 3
Query:   15 IPGLREAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQ 413
            IPGL+EAGWTP+         +           H  A M++LL  + +H  AWPF +PV+  +VPDYYE IK+PMDL +M  ++   + Y   E F+ D + +F N R YN  +T Y+K A RLE  F SKV+
Sbjct:  385 IPGLKEAGWTPE---------MDELAQRPKRGPHYAA-MQNLLTELQNHAAAWPFLQPVNKEEVPDYYEFIKEPMDLSSMEMKLNGNR-YEKMENFIYDARLIFNNCRAYNGENTSYFKYANRLEKFFNSKVK 506          
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: GCN5_ASHGO (Histone acetyltransferase GCN5 OS=Ashbya gossypii GN=GCN5 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   15 IPGLREAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQ 413
            +PGLREAGWTP+         +           H  A M+++L  + +H  AWPF +PV+  +VPDYYE IK+PMDL TM  ++E+ + Y   E F+ D + +F N R YN  +T Y+K A RLE  F +K++
Sbjct:  321 VPGLREAGWTPE---------MDELAQRPKRGPHY-ATMQNVLTELQNHAAAWPFLQPVNRDEVPDYYEFIKEPMDLSTMEIKLENNR-YEKMEDFIYDARLIFNNCRAYNGENTSYFKYANRLEKFFNTKMK 442          
The following BLAST results are available for this feature:
BLAST of FC873351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
GCN5_ARATH1.481e-6172.79Histone acetyltransferase GCN5 OS=Arabidopsis thal... [more]
GCN5_ORYSJ4.174e-5672.60Histone acetyltransferase GCN5 OS=Oryza sativa sub... [more]
KAT2A_HUMAN3.447e-2642.75Histone acetyltransferase KAT2A OS=Homo sapiens GN... [more]
KAT2B_MOUSE4.501e-2640.44Histone acetyltransferase KAT2B OS=Mus musculus GN... [more]
KAT2B_HUMAN7.678e-2641.18Histone acetyltransferase KAT2B OS=Homo sapiens GN... [more]
KAT2A_MOUSE3.811e-2541.30Histone acetyltransferase KAT2A OS=Mus musculus GN... [more]
GCN5_YEAST2.731e-2342.11Histone acetyltransferase GCN5 OS=Saccharomyces ce... [more]
GCN5_YARLI7.946e-2342.11Histone acetyltransferase GCN5 OS=Yarrowia lipolyt... [more]
GCN5_KLULA1.038e-2241.35Histone acetyltransferase GCN5 OS=Kluyveromyces la... [more]
GCN5_ASHGO3.019e-2240.60Histone acetyltransferase GCN5 OS=Ashbya gossypii ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3AC12FM1 AbsDev Citrus clementina cDNA clone KN0AAI3AC12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873351 ID=FC873351; Name=FC873351; organism=Citrus clementina; type=EST; length=735bp
TCAAAGTCGAGGACATTCCTGGCTTGAGAGAAGCTGGATGGACTCCTGAT
CAATGGGGCCATTCACGGTTTAGAACTTTAACTGCTGCTACTGACGGTGC
ATCAAATCAGAAGCATTTAACTGCATTTATGCGCTCACTTCTGAAGTCGA
TGCATGACCATGTTGATGCTTGGCCGTTCAAGGAACCAGTTGATGCCCGC
GATGTCCCCGATTACTACGAAATCATCAAAGATCCCATGGATCTGAGGAC
AATGTCAAAAAGAGTGGAGTCAGAACAATATTATGTGACATTTGAGATGT
TTGTTGCGGATGTCAAGAGGATGTTTGCCAATGCACGCACCTATAATTCA
CCCGACACCATTTATTATAAATGTGCAACCAGGCTGGAATCCCACTTTCA
GAGCAAAGTTCAGTCGGGACTACACTCTAGCACCAAAATTCAGCAGTAAA
GAATTCTGAACGTTCGTACTTGATGTGTTATAGTTCAATCGGGTTCCTTC
AGTATTGGTTTTAGATGTAGCATGGCATATGTAATATTGTTAATGTTATA
GATTAATTATGTATTCTATCTTCCTGGTATCTGTCTGTTTTAGTGTTTTA
CTGTATTGTCCTGGCCCTGCCCGCCGCCCCCCTCTTCCTTCTCGGGTTAA
TTTCGATGTATGAGAATCTTCAAAACATCTTTCAAATTATTGTAAATCTC
AATTTATTCTCAAAAAAAAAAAAAAAAAAAAAAAA
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