FC873357

Overview
NameFC873357
Unique NameFC873357
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length850
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10877 contig Ccv1_Contig10877:23..872. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873357 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 2.699e-92
Identity = 184/248 (74.19%), Postives = 202/248 (81.45%), Query Frame = 1
Query:   97 MISSVKHTPFSASTDFLPKKRFLTPT-LKFSPLPIIQN----SIFNNKFSSEKPLHISSTQNLTFSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELH 825
            M+SS+K +  S ST      R   PT LKFSPL II+N    S   N  S +KPLHISS  N        ++E+K +  AYEADRSRPLDINIE+ DEQ+    AQ+LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIA+APKTDLEFWK+LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF  GET P+PVY+SLLPIIGGCALAA+TEL+
Sbjct:    1 MLSSIKPSSSSFSTAISGSVRRSIPTKLKFSPLLIIKNCHNQSFNANVVSHQKPLHISSASNF-------KREVKVE--AYEADRSRPLDINIELPDEQS----AQKLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAAITELN 235          
BLAST of FC873357 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.031e-75
Identity = 141/196 (71.94%), Postives = 160/196 (81.63%), Query Frame = 1
Query:  238 KPLHISSTQNLTFSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELH 825
            KPLH+SS+         + K    +C AYEADRS P  I  +    + + EAA++LKIGIYFATWWALNVVFNIYNKKVLNA+PYPWLTSTLSLA GSLMML+SWA  I E PKTD +FWK+LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF+ GET P  VY+SL+PIIGGCAL+A+TEL+
Sbjct:   48 KPLHLSSSL--------RAKSPVVRCEAYEADRSEPHPIGDDAAAAETKSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELN 235          
BLAST of FC873357 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.354e-32
Identity = 64/146 (43.84%), Postives = 94/146 (64.38%), Query Frame = 1
Query:  385 FEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL 822
            F     L  G +F TW+ LNV+FNI NKK+ N FPYP+  S + LA G +  LVSW   + +    D    K L PVAV H +GHV + VS + VAVSFTH +K+ EP F+   S+F+ G+++P+ +++SL P++ G ++A++TEL
Sbjct:   92 FSRYPALTTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTEL 237          
BLAST of FC873357 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.722e-30
Identity = 64/140 (45.71%), Postives = 91/140 (65.00%), Query Frame = 1
Query:  403 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL 822
            L  GI    W+ LNV+FNI NKK+ N FPYP+  S + L  G +  LVSW+  + +    + +  K L PVAV H IGHV + VS + VAVSFTH IK+ EP F+   S+FL G+ +P+ +++SL P++ G A+A++TEL
Sbjct:  103 LVTGILLLMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWLSLAPVVLGVAMASLTEL 242          
BLAST of FC873357 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.250e-30
Identity = 62/140 (44.29%), Postives = 92/140 (65.71%), Query Frame = 1
Query:  403 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL 822
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + L  G +  L SW+  + +    D +  K L PVAV H IGHV + VS + VAVSFTH IK+ EP F+   S+F+ G+++P+ +++SL P++ G ++A++TEL
Sbjct:  100 LVTGSFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWSVGLPKRAPMDSKLLKLLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLAPVVIGVSMASLTEL 239          
BLAST of FC873357 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.250e-30
Identity = 62/140 (44.29%), Postives = 90/140 (64.29%), Query Frame = 1
Query:  403 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL 822
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + LA G +  L  WA  + +    D    K L PVA  H +GHV + VS + VAVSFTH IKS EP F+   S+F+ G+++P+ +++SL P++ G ++A++TEL
Sbjct:  104 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGLPKRAPMDSNLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKSLEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTEL 243          
BLAST of FC873357 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.548e-30
Identity = 64/160 (40.00%), Postives = 95/160 (59.38%), Query Frame = 1
Query:  370 DEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELHST*LDYGS 849
            D +  F     L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + LA G +  LVSW   + +    D    K L PVA  H +GHV + VS + V VSFTH +K+ EP F+   S+F+ G+ +P+ +++SL P++ G ++A++TEL    L + S
Sbjct:   99 DAKVGFFNKATLTTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWGVGLPKRAPIDSTQLKLLTPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLALWLSLAPVVLGVSMASLTELSFNWLGFTS 258          
BLAST of FC873357 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.458e-29
Identity = 60/140 (42.86%), Postives = 89/140 (63.57%), Query Frame = 1
Query:  403 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL 822
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + LA G +  L SW   + +    D    K L PV   H +GHV + VS + VAVSFTH IK+ EP F+   S+F+ G+++P+ +++SL P++ G ++A++TEL
Sbjct:  103 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLGSWTVGLPKRAPVDSNILKLLIPVGFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVVIGVSMASLTEL 242          
BLAST of FC873357 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.242e-29
Identity = 59/140 (42.14%), Postives = 90/140 (64.29%), Query Frame = 1
Query:  403 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL 822
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + L  G +  L+SW+  + +    +    K LFPVA+ H IGH+ + VS + VAVSF H IK+ EP FS   ++F+ G+ +P  +++SL P++ G ++A++TEL
Sbjct:  106 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSLIHLVVGVVYCLISWSVGLPKRAPINGTLLKLLFPVALCHGIGHITSNVSFAAVAVSFAHTIKALEPFFSAAATQFILGQQVPFSLWLSLAPVVIGVSMASLTEL 245          
BLAST of FC873357 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.186e-27
Identity = 59/140 (42.14%), Postives = 89/140 (63.57%), Query Frame = 1
Query:  403 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL 822
            L++G+ FA W+  N+ FNIYNK+VL A   P   + +  A GS+++   WA  + + PK       ++ P+AV HT+G++   +S+ KV+VSFTH IK+ EP FSV++S    GE     V  S++PI+GG ALA+VTE+
Sbjct:  100 LELGLLFAMWYLFNIYFNIYNKQVLKALHAPMTVTLVQFAVGSVLITFMWALNLYKRPKISAAQLAAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGEVPTPWVIGSIIPIVGGVALASVTEV 239          
The following BLAST results are available for this feature:
BLAST of FC873357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
GPT2_ARATH2.699e-9274.19Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH1.031e-7571.94Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
TPT_PEA5.354e-3243.84Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB1.722e-3045.71Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL2.250e-3044.29Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR2.250e-3044.29Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU8.548e-3040.00Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR1.458e-2942.86Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE4.242e-2942.14Triose phosphate/phosphate translocator, chloropla... [more]
TPT2_BRAOB5.186e-2742.14Triose phosphate/phosphate translocator, non-green... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BG06FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873357 ID=FC873357; Name=FC873357; organism=Citrus clementina; type=EST; length=850bp
CACGTATACAATTTCTCTTCTCTCCGGCTTCGGGTACAAAACTTGTCGAA
TTCGTTGAATTACCCCCCTACCATTCGCATTCTTCACAAAAACACAATGA
TCTCTTCAGTTAAGCACACCCCATTTTCAGCATCCACAGATTTCTTGCCA
AAGAAACGTTTTTTAACCCCAACGCTAAAGTTCTCTCCGCTACCCATCAT
CCAAAATTCAATCTTTAACAACAAATTCTCTTCAGAAAAGCCTCTTCATA
TTTCATCAACTCAAAATCTCACATTTTCTCCAAAAGAGCAACAAAAAGAG
CTTAAAACACAGTGCAATGCCTATGAGGCTGACAGGTCACGTCCTCTGGA
CATAAACATCGAGGTTCTTGATGAGCAGGCTCGGTTTGAGGCTGCCCAGA
GGCTCAAAATTGGCATATATTTTGCCACATGGTGGGCTTTGAATGTGGTG
TTTAATATCTATAACAAAAAAGTGTTGAATGCTTTTCCTTATCCTTGGCT
TACTTCTACTCTTTCACTGGCTTGTGGCTCTCTCATGATGTTGGTTTCTT
GGGCCACCAGAATCGCTGAAGCCCCTAAAACCGATCTTGAGTTCTGGAAG
AGTTTGTTTCCTGTTGCAGTGGCACATACAATTGGGCATGTAGCAGCAAC
CGTAAGTATGTCAAAAGTTGCAGTTTCATTCACTCACATCATCAAGAGTG
GTGAGCCTGCATTCAGTGTATTGGTTTCAAGGTTCTTGTTCGGTGAGACA
CTTCCCATGCCGGTTTATATGTCACTCCTGCCGATTATTGGAGGCTGTGC
CCTTGCTGCTGTTACAGAGCTCCACTCAACATGATTGGATTATGGGAGCT
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