FC873367

Overview
NameFC873367
Unique NameFC873367
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length508
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1208 contig Ccv1_Contig1208:1..508. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873367 vs. ExPASy Swiss-Prot
Match: DPM1_CRIGR (Dolichol-phosphate mannosyltransferase OS=Cricetulus griseus GN=DPM1 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 2.329e-49
Identity = 89/152 (58.55%), Postives = 122/152 (80.26%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSALIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADISHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWP 507
            Y +++PTYNER +  LIV+L+ K   E  ++ EI +++DGSPDGT+EV +QL+++YG DRILLRPR KKLGLGTAY+HG+KHA+G++V+IMDAD+SHHPK++P F +KQ E    IV+GTRY  +GGV+GW+L R++ SRGAN + Q LL P
Sbjct:   33 YSVLLPTYNERENLPLIVWLLVKSFSESSINYEIIIIDDGSPDGTREVAEQLEKIYGPDRILLRPREKKLGLGTAYIHGIKHATGNYVIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFITQILLRP 184          
BLAST of FC873367 vs. ExPASy Swiss-Prot
Match: DPM1_HUMAN (Dolichol-phosphate mannosyltransferase OS=Homo sapiens GN=DPM1 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 3.042e-49
Identity = 88/152 (57.89%), Postives = 122/152 (80.26%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSALIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADISHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWP 507
            Y +++PTYNER +  LIV+L+ K   E  ++ EI +++DGSPDGT++V +QL+++YG DRILLRPR KKLGLGTAY+HG+KHA+G++++IMDAD+SHHPK++P F +KQ E    IV+GTRY  +GGV+GW+L R++ SRGAN L Q LL P
Sbjct:   27 YSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFLTQILLRP 178          
BLAST of FC873367 vs. ExPASy Swiss-Prot
Match: DPM1_MOUSE (Dolichol-phosphate mannosyltransferase OS=Mus musculus GN=Dpm1 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 3.973e-49
Identity = 89/152 (58.55%), Postives = 121/152 (79.61%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSALIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADISHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWP 507
            Y +++PTYNER +  LIV+L+ K   E  ++ EI +++DGSPDGT+EV +QL ++YG DRILLRPR KKLGLGTAY+HG+KHA+G++V+IMDAD+SHHPK++P F +KQ E    IV+GTRY  +GGV+GW+L R++ SRGAN + Q LL P
Sbjct:   27 YSVLLPTYNERENLPLIVWLLVKSFSESAINYEIIIIDDGSPDGTREVAEQLAEIYGPDRILLRPREKKLGLGTAYIHGIKHATGNYVIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFITQILLRP 178          
BLAST of FC873367 vs. ExPASy Swiss-Prot
Match: DPM1_SCHPO (Dolichol-phosphate mannosyltransferase OS=Schizosaccharomyces pombe GN=dpm1 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.188e-49
Identity = 92/150 (61.33%), Postives = 115/150 (76.67%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSALIVYLIFKHL--REVDLEISVVEDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADISHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLL 501
            Y +++PTYNER +  +I YLI K     ++D EI +++D SPDGTQEV K+LQ++YGED+ILL+PR  KLGLGTAY+HGLK A+G FV+IMDAD SHHPKYLP F K Q E    IV GTRY + GGV+GWNL R+  SRGAN+LA T+L
Sbjct:    4 YSVLLPTYNERKNLPIITYLIAKTFDQEKLDWEIVIIDDASPDGTQEVAKELQKIYGEDKILLKPRSGKLGLGTAYIHGLKFATGDFVIIMDADFSHHPKYLPEFIKLQKEHNYDIVLGTRYAKDGGVYGWNLKRKFISRGANLLASTVL 153          
BLAST of FC873367 vs. ExPASy Swiss-Prot
Match: DPM1_PIG (Dolichol-phosphate mannosyltransferase OS=Sus scrofa GN=DPM1 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 4.392e-48
Identity = 85/152 (55.92%), Postives = 121/152 (79.61%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSALIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADISHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWP 507
            Y +++PTYNER +  LIV+L+ K   E  ++ EI +++DGSPDGT+++ +QL ++YG D+ILLRPR KKLGLGTAY+HG+KHA+G++++IMDAD+SHHPK++P F +KQ E    IV+GTRY  +GGV+GW+L R++ SRGAN + Q LL P
Sbjct:   26 YSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDIAEQLVKIYGSDKILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFITQILLRP 177          
BLAST of FC873367 vs. ExPASy Swiss-Prot
Match: DPM1_DROME (Probable dolichol-phosphate mannosyltransferase OS=Drosophila melanogaster GN=CG10166 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.718e-47
Identity = 86/152 (56.58%), Postives = 119/152 (78.29%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSALIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADISHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWP 507
            Y I++PTYNE+ +  +I++LI K+++   ++ E+ V++DGSPDGT +V K LQ++YGED+I+LRPR  KLGLGTAY+HG+KHA+G F+VI+DAD+SHHPK++P F K Q E    IV+GTRY  +GGV GW+  R+L SRGAN L+Q LL P
Sbjct:    8 YSILMPTYNEKDNLPIIIWLIVKYMKASGLEYEVIVIDDGSPDGTLDVAKDLQKIYGEDKIVLRPRGSKLGLGTAYIHGIKHATGDFIVIIDADLSHHPKFIPEFIKLQQEGNYDIVSGTRYAGNGGVFGWDFKRKLISRGANFLSQVLLRP 159          
BLAST of FC873367 vs. ExPASy Swiss-Prot
Match: DPM1_BOVIN (Dolichol-phosphate mannosyltransferase OS=Bos taurus GN=DPM1 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 4.856e-47
Identity = 85/152 (55.92%), Postives = 119/152 (78.29%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSALIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADISHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWP 507
            Y +++PTYNER +   IV+L+ K   E   + EI +++DGSPDGT++V +QL+++YG DRILLRPR KKLGLGTAY+HG+KHA+G++++IMDAD+SHHPK++P F +KQ E    IV+GTRY  +GGV+GW+L R++ SR AN + Q LL P
Sbjct:   27 YSVLLPTYNERENLPFIVWLLVKSFSESGFNYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRVANFITQILLRP 178          
BLAST of FC873367 vs. ExPASy Swiss-Prot
Match: DPM1_DICDI (Dolichol-phosphate mannosyltransferase OS=Dictyostelium discoideum GN=dpm1 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.617e-42
Identity = 81/152 (53.29%), Postives = 113/152 (74.34%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSALIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADISHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWP 507
            Y II+PTY ER +  +I++LI   L +  +D E+ +VED SPDGT EV +QLQ++YGE++I +  RP K+GLG+AY+ G+K ++G++V++MDAD+SHHPK++P F +KQ +    IVTGTRY   GGV GWNL R+LTSR AN +A  LL P
Sbjct:   20 YTIILPTYKERENLPIIIWLISTELEKCFIDYEVVIVEDNSPDGTLEVAQQLQKIYGEEKIKILSRPGKMGLGSAYMDGIKKSTGNWVILMDADLSHHPKFIPQFIEKQKKLNCEIVTGTRYQSGGGVFGWNLYRKLTSRVANYIASVLLTP 171          
BLAST of FC873367 vs. ExPASy Swiss-Prot
Match: DPM1_USTMA (Dolichol-phosphate mannosyltransferase OS=Ustilago maydis GN=DPM1 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.927e-11
Identity = 51/152 (33.55%), Postives = 74/152 (48.68%), Query Frame = 1
Query:   64 IIIPTYNERLSSALIVYLIFKHLRE------VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADISHHPKYLPSFRKKQLETGASIVTGTRY-VRSGGVHGWNLMRELTSRGANVLAQTL 498
            +I+P + E L+   +V  +             + EI +V+D S DG+ E V  LQ      RI++R   +  GL +A V G + A G  ++ MDAD+ H P+ +PS     L    S V GTRY V       W L R + S GA +LA+ L
Sbjct:   32 VIVPAFRENLNLRPLVTRLSSAFASQSSSELANTEIIIVDDNSRDGSVETVSALQSEGYNVRIIVRTSER--GLSSAVVRGFREARGQRMICMDADLQHPPEAVPSL-LLALNGQKSFVLGTRYGVGVSMDKDWPLHRRIISSGARMLARPL 180          
The following BLAST results are available for this feature:
BLAST of FC873367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
DPM1_CRIGR2.329e-4958.55Dolichol-phosphate mannosyltransferase OS=Cricetul... [more]
DPM1_HUMAN3.042e-4957.89Dolichol-phosphate mannosyltransferase OS=Homo sap... [more]
DPM1_MOUSE3.973e-4958.55Dolichol-phosphate mannosyltransferase OS=Mus musc... [more]
DPM1_SCHPO5.188e-4961.33Dolichol-phosphate mannosyltransferase OS=Schizosa... [more]
DPM1_PIG4.392e-4855.92Dolichol-phosphate mannosyltransferase OS=Sus scro... [more]
DPM1_DROME3.718e-4756.58Probable dolichol-phosphate mannosyltransferase OS... [more]
DPM1_BOVIN4.856e-4755.92Dolichol-phosphate mannosyltransferase OS=Bos taur... [more]
DPM1_DICDI1.617e-4253.29Dolichol-phosphate mannosyltransferase OS=Dictyost... [more]
DPM1_USTMA1.927e-1133.55Dolichol-phosphate mannosyltransferase OS=Ustilago... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3AD06FM1 AbsDev Citrus clementina cDNA clone KN0AAI3AD06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873367 ID=FC873367; Name=FC873367; organism=Citrus clementina; type=EST; length=508bp
TTGAGACGAATTATTAATAATATGGAAGAGACGAACAAGAACAAGAACAA
GAACAAATACAGAATAATTATACCAACATACAACGAACGCCTCAGCAGTG
CTCTGATCGTTTACCTCATCTTCAAGCATCTGCGGGAGGTAGATTTAGAA
ATAAGCGTGGTGGAGGATGGAAGTCCTGATGGTACACAAGAAGTTGTAAA
ACAATTGCAGCAATTATACGGAGAAGATCGAATTCTGTTGAGACCTAGAC
CGAAGAAGCTTGGATTAGGGACTGCTTACGTTCATGGTTTGAAACATGCA
TCGGGCAGTTTTGTTGTGATTATGGATGCTGATATATCCCACCATCCAAA
GTACTTGCCAAGCTTCAGAAAGAAACAGTTGGAGACAGGTGCAAGTATTG
TAACTGGAACCCGGTACGTTAGAAGTGGGGGTGTGCATGGGTGGAATCTT
ATGCGCGAACTGACTAGTAGAGGAGCCAATGTCCTTGCTCAAACACTTTT
ATGGCCTG
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