FC873370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873370 vs. ExPASy Swiss-Prot
Match: RL301_ARATH (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana GN=RPL30A PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.328e-20 Identity = 44/51 (86.27%), Postives = 47/51 (92.16%), Query Frame = 2 Query: 2 EYYAMLARFGVHHYNENYVYLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 154 EYYAMLA+ GVHHYN N V LGTACGKYFRVSCLSI+DPGDSDIIKSLPG+ Sbjct: 61 EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGD 111
BLAST of FC873370 vs. ExPASy Swiss-Prot
Match: RL302_ARATH (60S ribosomal protein L30-2 OS=Arabidopsis thaliana GN=RPL30B PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.774e-20 Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 2 Query: 2 EYYAMLARFGVHHYNENYVYLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 154 EYYAMLA+ GVHHYN N V LGTACGKYFRVSCLSI+DPGDSDIIKS+PG+ Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGD 111
BLAST of FC873370 vs. ExPASy Swiss-Prot
Match: RL30_EUPES (60S ribosomal protein L30 OS=Euphorbia esula GN=RPL30 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.971e-19 Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 2 Query: 2 EYYAMLARFGVHHYNENYVYLGTACGKYFRVSCLSIIDPGDSDIIKSLPGEH 157 EYYAMLA+ GVHHYN N V LGTACGKYFRV CLSIID GDSDIIKS+PG+H Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSDIIKSIPGDH 112
BLAST of FC873370 vs. ExPASy Swiss-Prot
Match: RL30_LUPLU (60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.489e-19 Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 2 Query: 2 EYYAMLARFGVHHYNENYVYLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 154 EYYAMLA+ GVHHYN N V LGTACGKY+RV CLSI+DPGDSDIIK+LPG+ Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGD 111
BLAST of FC873370 vs. ExPASy Swiss-Prot
Match: RL303_ARATH (60S ribosomal protein L30-3 OS=Arabidopsis thaliana GN=RPL30C PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.489e-19 Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 2 Query: 2 EYYAMLARFGVHHYNENYVYLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 154 EYYAMLA+ GVH YN N V LGTACGKYFRVSCLSI+DPGDSDIIK+LPG+ Sbjct: 61 EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGD 111
BLAST of FC873370 vs. ExPASy Swiss-Prot
Match: RL30_MAIZE (60S ribosomal protein L30 OS=Zea mays GN=RPL30 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.110e-17 Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 2 Query: 2 EYYAMLARFGVHHYNENYVYLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 154 EYYAMLA+ VHH++ N V LGTACGKYFRV CLSIIDPGDSDIIK+ PGE Sbjct: 61 EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGE 111
BLAST of FC873370 vs. ExPASy Swiss-Prot
Match: RL30_BRABE (60S ribosomal protein L30 OS=Branchiostoma belcheri GN=RPL30 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.934e-16 Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 2 EYYAMLARFGVHHYNENYVYLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 154 EYYAMLA+ GVHHY+ N + LGTACGKYFRV L+I DPGDSDII+S+P E Sbjct: 58 EYYAMLAKTGVHHYSGNNIELGTACGKYFRVCTLAITDPGDSDIIRSMPAE 108
BLAST of FC873370 vs. ExPASy Swiss-Prot
Match: RL30_RAT (60S ribosomal protein L30 OS=Rattus norvegicus GN=Rpl30 PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.322e-15 Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 2 Query: 2 EYYAMLARFGVHHYNENYVYLGTACGKYFRVSCLSIIDPGDSDIIKSLP 148 EYYAMLA+ GVHHY+ N + LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of FC873370 vs. ExPASy Swiss-Prot
Match: RL30_OPHHA (60S ribosomal protein L30 OS=Ophiophagus hannah GN=RPL30 PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.322e-15 Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 2 Query: 2 EYYAMLARFGVHHYNENYVYLGTACGKYFRVSCLSIIDPGDSDIIKSLP 148 EYYAMLA+ GVHHY+ N + LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of FC873370 vs. ExPASy Swiss-Prot
Match: RL30_MOUSE (60S ribosomal protein L30 OS=Mus musculus GN=Rpl30 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.322e-15 Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 2 Query: 2 EYYAMLARFGVHHYNENYVYLGTACGKYFRVSCLSIIDPGDSDIIKSLP 148 EYYAMLA+ GVHHY+ N + LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109 The following BLAST results are available for this feature:
BLAST of FC873370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873370 ID=FC873370; Name=FC873370; organism=Citrus clementina; type=EST; length=271bpback to top |