FC873381

Overview
NameFC873381
Unique NameFC873381
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length644
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873381 vs. ExPASy Swiss-Prot
Match: Y2734_ARATH (Uncharacterized protein At2g17340 OS=Arabidopsis thaliana GN=At2g17340 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.651e-31
Identity = 68/84 (80.95%), Postives = 76/84 (90.48%), Query Frame = 2
Query:  101 LIISSFSKLL*VIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEVSS 352
            L+I++    L VIDL+ VSQELAYL+SDADLVI+EGMGRGIETNLYAQFKCDSLKIGMVKH EVA+FLGGRLYDCVFK+NEV S
Sbjct:  284 LLIANSGNDLPVIDLSRVSQELAYLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEVQS 367          
BLAST of FC873381 vs. ExPASy Swiss-Prot
Match: PANK2_ARATH (Pantothenate kinase 2 OS=Arabidopsis thaliana GN=At4g32180 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.394e-14
Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 2
Query:  137 IDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQ-FLGGRLYDCVFKYNEVS 349
            IDL  VS ELA  A DADLV+LEGMGR + TN  AQF+C++LK+ MVK+  +A+  + G +YDCV +Y   S
Sbjct:  798 IDLRQVSSELAAAAKDADLVVLEGMGRALHTNFNAQFQCEALKLAMVKNQRLAEKLIKGNIYDCVCRYEPPS 869          
BLAST of FC873381 vs. ExPASy Swiss-Prot
Match: PANK4_PONAB (Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.520e-11
Identity = 31/69 (44.93%), Postives = 50/69 (72.46%), Query Frame = 2
Query:  137 IDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKY 337
            +DL+ + + LA L  +  ADLV++EGMGR + TN +A  +C+SLK+ ++K+  +A+ LGGRL+  +FKY
Sbjct:  700 LDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERLGGRLFSVIFKY 768          
BLAST of FC873381 vs. ExPASy Swiss-Prot
Match: PANK4_HUMAN (Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.520e-11
Identity = 31/69 (44.93%), Postives = 50/69 (72.46%), Query Frame = 2
Query:  137 IDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKY 337
            +DL+ + + LA L  +  ADLV++EGMGR + TN +A  +C+SLK+ ++K+  +A+ LGGRL+  +FKY
Sbjct:  700 LDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERLGGRLFSVIFKY 768          
The following BLAST results are available for this feature:
BLAST of FC873381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
Y2734_ARATH1.651e-3180.95Uncharacterized protein At2g17340 OS=Arabidopsis t... [more]
PANK2_ARATH2.394e-1454.17Pantothenate kinase 2 OS=Arabidopsis thaliana GN=A... [more]
PANK4_PONAB5.520e-1144.93Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=... [more]
PANK4_HUMAN5.520e-1144.93Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI1BH12FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873381 ID=FC873381; Name=FC873381; organism=Citrus clementina; type=EST; length=644bp
ATTCTGGCAATGATTTGCCAGTAAGAAATGGAAGTGCTGCCTTTTACTTC
TTAAAGTCATTGCATCAGTAGAAAGATGTCTTTGAGTCATCGCATGTATG
TTAATAATCTCTTCATTTTCAAAACTCTTGTAGGTTATTGATCTTACAGC
AGTATCACAAGAGCTTGCCTACCTAGCGAGTGATGCAGACCTAGTTATCT
TAGAAGGAATGGGTCGTGGAATTGAAACAAATCTGTACGCTCAATTCAAA
TGTGATTCCTTGAAGATTGGGATGGTCAAACATCCCGAGGTTGCCCAGTT
TCTAGGAGGACGGCTCTATGATTGTGTCTTTAAATACAATGAAGTTTCAA
GTTAAAGTTGATTCTTTGCCTGTCCCCCTAACCCTATTCGTCCTGTGTCG
ATCATTCAGTGCACATAGAATATTAGAGCATAAAAACTTAAGCATATGAA
TGTCAAAATTTCACCCTTATAGGCAATAATGGAAACTGAAAATCCGAAGA
CTTGCACCCGAATGGTTTTTCCATACTTGTGATGTCGGGTGGATTGTATT
TTCCTGTCGGGTGGATTGTATTTTCCTGTTTATGAAGTTCGGCTTCATAA
TTACTGTTATTATCATTATTTTATTCAAAAAAAAAAAAAAAAAA
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