FC873390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873390 vs. ExPASy Swiss-Prot
Match: LDHD_MOUSE (Probable D-lactate dehydrogenase, mitochondrial OS=Mus musculus GN=Ldhd PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.399e-37 Identity = 74/183 (40.44%), Postives = 115/183 (62.84%), Query Frame = 2 Query: 92 FLEAYSHEQTLIVQ-----KIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKKIKVALDPNNIMNPGKLI 625 FLE + +QTL Q I ++ G+ F +A++ E + ELW R A +A A+ P +A +DVCVP+S L E++ +K+E+ AS L ++ H GDGNFH ++L DP E+++ + + AL++ GTCTGEHGIG GK + L++E+G +ETM+++K LDP +MNPGK++ Sbjct: 302 FLEFHGSQQTLAEQLQRTEAITQDNGGSHFSWAKEAEKRNELWAARHNAWYAALALSPGSKAYSTDVCVPISRLPEILVETKEEIKASKLTGAIVGHVGDGNFHCILLVDPDDAEEQRRVKAFAENLGRRALALGGTCTGEHGIGLGKRQLLQEEVGPVGVETMRQLKNTLDPRGLMNPGKVL 484
BLAST of FC873390 vs. ExPASy Swiss-Prot
Match: DLD1_KLULA (D-lactate dehydrogenase [cytochrome], mitochondrial OS=Kluyveromyces lactis GN=DLD1 PE=3 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 7.573e-37 Identity = 76/169 (44.97%), Postives = 110/169 (65.09%), Query Frame = 2 Query: 128 VQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACF----AMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKKIKVALDPNNIMNPGKL 622 V+KI S+HN T F FA D ++K ELW+ RK ALW+ P +DV VP+S A++I+ +K+E++AS L+ +++ HAGDGNFH I+++ E R+ AE + MV A+ EGTCTGEHG+G GK YL +E+G + M+K+K+ALDP I+NP K+ Sbjct: 401 VEKIASQHNNTKFEFATDEDSKLELWEARKVALWSTIDTGRKTNPDANIWTTDVAVPISKFADVINATKEEMNASGLLTSLVGHAGDGNFHAFIIYNT---EQRKTAETIVENMVKRAIDAEGTCTGEHGVGIGKRDYLLEEVGEDTVAVMRKLKLALDPKRILNPDKI 566
BLAST of FC873390 vs. ExPASy Swiss-Prot
Match: LDHD_HUMAN (Probable D-lactate dehydrogenase, mitochondrial OS=Homo sapiens GN=LDHD PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.428e-35 Identity = 71/183 (38.80%), Postives = 114/183 (62.30%), Query Frame = 2 Query: 92 FLEAYSHEQTLIVQ-----KIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKKIKVALDPNNIMNPGKLI 625 FLE + +Q L Q +IV ++ +DF +A++ E + LW R A +A A P + +DVCVP+S L E++ ++K++L+AS L +++ H GDGNFH ++L +P E+ + + AL++ GTCTGEHGIG GK + L++E+G +ETM+++K LDP +MNPGK++ Sbjct: 325 FLEFHGSQQALEEQLQRTEEIVQQNGASDFSWAKEAEERSRLWTARHNAWYAALATRPGCKGYSTDVCVPISRLPEIVVQTKEDLNASGLTGSIVGHVGDGNFHCILLVNPDDAEELGRVKAFAEQLGRRALALHGTCTGEHGIGMGKRQLLQEEVGAVGVETMRQLKAVLDPQGLMNPGKVL 507
BLAST of FC873390 vs. ExPASy Swiss-Prot
Match: DLD1_YEAST (D-lactate dehydrogenase [cytochrome] 1, mitochondrial OS=Saccharomyces cerevisiae GN=DLD1 PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 4.300e-32 Identity = 71/169 (42.01%), Postives = 106/169 (62.72%), Query Frame = 2 Query: 128 VQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACF----AMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKKIKVALDPNNIMNPGKL 622 V+ + ++ F FA+D + K ELW+ RK ALW+ + + S + +DV VP+S ++I +KK++ AS LI ++ HAGDGNFH I++ E+ + +L MV AL+ EGTCTGEHG+G GK +YL +ELG ++ M+KIK+A+DP IMNP K+ Sbjct: 408 VKAVAQLNHCNSFQFAKDDDEKLELWEARKVALWSVLDADKSKDKSAKIWTTDVAVPVSQFDKVIHETKKDMQASKLINAIVGHAGDGNFHAFIVY--RTPEEHETCSQLVDRMVKRALNAEGTCTGEHGVGIGKREYLLEELGEAPVDLMRKIKLAIDPKRIMNPDKI 574
BLAST of FC873390 vs. ExPASy Swiss-Prot
Match: GLCD_BACSU (Glycolate oxidase subunit glcD OS=Bacillus subtilis GN=glcD PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.665e-17 Identity = 49/165 (29.70%), Postives = 80/165 (48.48%), Query Frame = 2 Query: 128 VQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKKIKVALDPNNIMNPGKL 622 ++ I + + A+ E L + R+ AL A ++P+ ++ D VP S +A ++ + HAGDGN H D +++ + E+ + A+ + GT TGEHG+G K YLE +L ++ MK +K A DP NI+NPGK+ Sbjct: 295 IEAICKKGDAVSVQTAQTEEEAFALTEARRSALSALARLKPT--TILEDATVPRSEIANMVKAINDIAAKYDISICTFGHAGDGNLHPTCTTDIRNKDEMERVEQAFAEIFEKAIELGGTITGEHGVGEMKAPYLEMKLKKEGIDAMKALKAAFDPRNILNPGKM 457
BLAST of FC873390 vs. ExPASy Swiss-Prot
Match: GLCD_ECOLI (Glycolate oxidase subunit glcD OS=Escherichia coli (strain K12) GN=glcD PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.705e-17 Identity = 52/172 (30.23%), Postives = 82/172 (47.67%), Query Frame = 2 Query: 128 VQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKKIKVALDPNNIMNPGKLIPP-HIC 640 V I+ + TD A+D + W RK A A + P + M D +P L ++ + L + HAGDGN H +ILFD ++ + AE L ++ + + G+ +GEHGIG K+ + + + + T +K A DP+ ++NPGK IP H C Sbjct: 309 VNDILLKAGATDVRLAQDEAERVRFWAGRKNAFPAVGRISPDYYCM--DGTIPRRALPGVLEGIARLSQQYDLRVANVFHAGDGNMHPLILFDANEPGEFARAEELGGKILELCVEVGGSISGEHGIGREKINQMCAQFNSDEITTFHAVKAAFDPDGLLNPGKNIPTLHRC 478
BLAST of FC873390 vs. ExPASy Swiss-Prot
Match: GLCD_ECOL6 (Glycolate oxidase subunit glcD OS=Escherichia coli O6 GN=glcD PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.705e-17 Identity = 52/172 (30.23%), Postives = 82/172 (47.67%), Query Frame = 2 Query: 128 VQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKKIKVALDPNNIMNPGKLIPP-HIC 640 V I+ + TD A+D + W RK A A + P + M D +P L ++ + L + HAGDGN H +ILFD ++ + AE L ++ + + G+ +GEHGIG K+ + + + + T +K A DP+ ++NPGK IP H C Sbjct: 309 VNDILLKAGATDVRLAQDEAERVRFWAGRKNAFPAVGRISPDYYCM--DGTIPRRALPGVLEGIARLSQQYDLRVANVFHAGDGNMHPLILFDANEPGEFARAEELGGKILELCVEVGGSISGEHGIGREKINQMCAQFNSDEITTFHAVKAAFDPDGLLNPGKNIPTLHRC 478 The following BLAST results are available for this feature:
BLAST of FC873390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873390 ID=FC873390; Name=FC873390; organism=Citrus clementina; type=EST; length=742bpback to top |