FC873393

Overview
NameFC873393
Unique NameFC873393
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length856
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10150 contig Ccv1_Contig10150:1..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873393 vs. ExPASy Swiss-Prot
Match: MFSD5_MOUSE (Major facilitator superfamily domain-containing protein 5 OS=Mus musculus GN=Mfsd5 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.505e-45
Identity = 101/256 (39.45%), Postives = 147/256 (57.42%), Query Frame = 2
Query:   47 YLVFXXXXXXXXXXELSKTNK---DRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKR-GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQS 802
            YL F          ELS+       R  ++ +F  F+ ++  VY L +A DWLQ PY+Y LY  Y F +G+I  L++ G  S++LFG +  SL D  GRK++CV + LTY L CITK S  Y +L++GR LGG++T+LLFSAFE+W + EH +R  F  +W+  TF++A F  N ++A+ +G+    +     LGPVAPF AA   LA+   + L +W ENY      +       G    + SD ++ LLG IQ+
Sbjct:    6 YLSFVGLLASCLGLELSRCRARPPGRACSNPSFLQFQLDFYQVYFLALAADWLQAPYLYKLYQHYHFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKKSCVLFSLTYSLCCITKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAF-WNHVLAVAAGVAAEAVASWIGLGPVAPFVAAIPLLALTGALALRNWGENY---DRQRAFSKTCAGGLRCLLSDRRVLLLGVIQA 257          
BLAST of FC873393 vs. ExPASy Swiss-Prot
Match: MFSD5_HUMAN (Major facilitator superfamily domain-containing protein 5 OS=Homo sapiens GN=MFSD5 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.505e-45
Identity = 100/256 (39.06%), Postives = 147/256 (57.42%), Query Frame = 2
Query:   47 YLVFXXXXXXXXXXELSKTNKD---RINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKR-GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQS 802
            YL F          ELS+       R  ++ +F  F+ ++  VY L +A DWLQ PY+Y LY  Y F +G+I  L++ G  S++LFG +  SL D  GRK +CV + LTY L C+TK S  Y +L++GR LGG++T+LLFSAFE+W + EH +R  F  +W+  TF++A F  N ++A+++G+    +     LGPVAPF AA   LA+   + L +W ENY      +       G    + SD ++ LLG IQ+
Sbjct:    6 YLAFVGLLASCLGLELSRCRAKPPGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYYFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKNSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAF-WNHVLAVVAGVAAEAVASWIGLGPVAPFVAAIPLLALAGALALRNWGENY---DRQRAFSRTCAGGLRCLLSDRRVLLLGTIQA 257          
BLAST of FC873393 vs. ExPASy Swiss-Prot
Match: MFSD5_PONAB (Major facilitator superfamily domain-containing protein 5 OS=Pongo abelii GN=MFSD5 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.121e-44
Identity = 99/256 (38.67%), Postives = 146/256 (57.03%), Query Frame = 2
Query:   47 YLVFXXXXXXXXXXELSKTNKD---RINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKR-GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQS 802
            YL F          ELS+       R  ++ +F   + ++  VY L +A DWLQ PY+Y LY  Y F +G+I  L++ G  S++LFG +  SL D  GRK +CV + LTY L C+TK S  Y +L++GR LGG++T+LLFSAFE+W + EH +R  F  +W+  TF++A F  N ++A+++G+    +     LGPVAPF AA   LA+   + L +W ENY      +       G    + SD ++ LLG IQ+
Sbjct:    6 YLAFVGLLASCLGLELSRCRAKPPGRACSNPSFLRSQLDFYQVYFLALAADWLQAPYLYKLYQHYYFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKNSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPTEWIPATFARAAF-WNHVLAVVAGVAAEAVASWIGLGPVAPFVAAIPLLALAGALALRNWGENY---DRQRAFSRTCAGGLRCLLSDRRVLLLGTIQA 257          
BLAST of FC873393 vs. ExPASy Swiss-Prot
Match: MFSD5_BOVIN (Major facilitator superfamily domain-containing protein 5 OS=Bos taurus GN=MFSD5 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.121e-44
Identity = 99/256 (38.67%), Postives = 146/256 (57.03%), Query Frame = 2
Query:   47 YLVFXXXXXXXXXXELSKTN---KDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKR-GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQS 802
            YL F          ELS+       R  ++ +F  F+ ++  VY L +A DWLQ PY+Y LY  Y F + +I  L++ G  S++LFG +  SL D  GRK++CV + LTY L C+TK S  Y +L++GR LGG++T+LLFSAFE+W + EH +R  F  +W+  TF++A F  N ++A+ +G+    +     LGPVAPF AA   LA+   + L +W ENY      +       G    + SD ++ LLG IQ+
Sbjct:    6 YLAFVVLLASCLGLELSRCRAKPSGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYHFLEAQIAILYVCGLASTVLFGLVASSLVDWLGRKKSCVLFSLTYSLCCLTKLSRDYFVLLVGRALGGLSTALLFSAFEAWYIHEHLERHDFPTEWIPATFARAAF-WNHVLAVAAGVAAEAVACWMGLGPVAPFVAAIPLLALAGALALHNWGENY---DRQRAFSRTCAGGLRCLLSDRRVLLLGTIQA 257          
BLAST of FC873393 vs. ExPASy Swiss-Prot
Match: MFSD5_XENLA (Major facilitator superfamily domain-containing protein 5 OS=Xenopus laevis GN=mfsd5 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.683e-39
Identity = 82/225 (36.44%), Postives = 129/225 (57.33%), Query Frame = 2
Query:  131 AFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQS 802
            AF  F+ ++   Y   +A DWLQGPY+Y LY  Y F +G+I  +++ GFG+S+  G +   L  + GR+++C+ +CL    S + K S +Y +LM GR+LGG ++SLLFS FE+W   EH  +  F  +WL  TF++A    NG +AI +G+  N+  +   LGP +P   A   L + +V+++  W ENYG  S  + +          +  D ++ LLG IQ+
Sbjct:   39 AFRQFQYDFYRTYFPALAADWLQGPYLYKLYQHYHFLEGQIAIIYVCGFGASVFAGLVSVPLTSRLGRRKSCILFCLLLSASYLCKLSQEYFVLMTGRVLGGFSSSLLFSCFEAWYTHEHAEQHDFPAEWLPHTFTRAA-AWNGGIAIAAGITANVCAEWLGLGPASPSVLAVPLLVLSVVLVIREWDENYGQTSSFRRVCGD---GLRCLLRDRRVLLLGTIQA 259          
BLAST of FC873393 vs. ExPASy Swiss-Prot
Match: MFSD5_XENTR (Major facilitator superfamily domain-containing protein 5 OS=Xenopus tropicalis GN=mfsd5 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.019e-38
Identity = 80/225 (35.56%), Postives = 128/225 (56.89%), Query Frame = 2
Query:  131 AFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQS 802
            AF  F+ ++   Y   +A DWLQGPY+Y LY  Y F +G+I  +++ GFG+S+  G +   L  + GR+++C+ +CL    S + K S +Y +L+ GR+LGG ++SLLFS+FE+W   EH  +  F  +WL  TF++A    NG +AI +G+  N   +   LGP +P   A   L + + +++  W ENYG  S  + +          +  D ++ LLG IQ+
Sbjct:   39 AFRQFQYDFYRTYFPALAADWLQGPYLYKLYQHYHFLEGQIAIIYVCGFGASVFAGLVSAPLTSRLGRRKSCILFCLLLSASYLCKLSQEYFVLITGRVLGGFSSSLLFSSFEAWYTHEHAEQHDFPAEWLPHTFTRAA-AWNGGIAIAAGVIANACAEWLGLGPASPSVLAVPLLVLSVALVIREWDENYGQTSSFRRVCGD---GLRCLLRDRRVLLLGTIQA 259          
BLAST of FC873393 vs. ExPASy Swiss-Prot
Match: MFSD5_TAKRU (Major facilitator superfamily domain-containing protein 5 OS=Takifugu rubripes GN=mfsd5 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.966e-38
Identity = 82/195 (42.05%), Postives = 116/195 (59.49%), Query Frame = 2
Query:  131 AFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNK-RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS 712
            AF  F+  +L  Y L +  DWLQGPY+Y LY  Y F + +I  L++ G  S +LF    G L+   GR+  C+ +CL+Y   C+TK S  Y +L++GRILGG++TSLL + FESW V  H +   F ++W+  TF+KA    +GL A+ +GL  NLL +   LGPVAPF  A  FLA     +L+ W +   + S
Sbjct:   38 AFRRFQATFLRAYLLALWADWLQGPYLYKLYRHYSFLESQIAILYVCGLASCVLFAPFSGWLSQALGRRHMCIFFCLSYATCCLTKLSRDYFVLIVGRILGGLSTSLLTTTFESWYVHHHVEIHDFPKEWIPTTFTKAATWNHGL-AVGAGLVANLLAEWLHLGPVAPFLLAVPFLACCAWFVLTDWAKEEAEKS 231          
BLAST of FC873393 vs. ExPASy Swiss-Prot
Match: MFSD5_DANRE (Major facilitator superfamily domain-containing protein 5 OS=Danio rerio GN=mfsd5 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.378e-35
Identity = 78/187 (41.71%), Postives = 110/187 (58.82%), Query Frame = 2
Query:  131 AFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSW 688
            AF  F+  +L  Y L +  DWLQGPY+Y LY  Y F + +I  L++ G  S +LF  + G L    GR++ C+ +CL Y + CITK S  Y +L++GR+LGG++TSLL + FE+W V  H +   F ++W+ +TF K      GL A+ +GL  NL  +   LGPVAPF  A   LA     +LS W
Sbjct:   40 AFQRFQKLFLKAYLLALWADWLQGPYLYKLYRHYNFLESQIAILYVCGLASCVLFAPVAGWLPQFLGRRQTCLLFCLAYSVCCITKLSQDYFMLILGRVLGGLSTSLLTTTFEAWYVHGHVDIHDFPKEWIPVTFGKVANWNYGL-AVGAGLVANLFAEWLGLGPVAPFLLAIPSLAACAWFVLSEW 225          
The following BLAST results are available for this feature:
BLAST of FC873393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
MFSD5_MOUSE2.505e-4539.45Major facilitator superfamily domain-containing pr... [more]
MFSD5_HUMAN2.505e-4539.06Major facilitator superfamily domain-containing pr... [more]
MFSD5_PONAB2.121e-4438.67Major facilitator superfamily domain-containing pr... [more]
MFSD5_BOVIN2.121e-4438.67Major facilitator superfamily domain-containing pr... [more]
MFSD5_XENLA2.683e-3936.44Major facilitator superfamily domain-containing pr... [more]
MFSD5_XENTR1.019e-3835.56Major facilitator superfamily domain-containing pr... [more]
MFSD5_TAKRU2.966e-3842.05Major facilitator superfamily domain-containing pr... [more]
MFSD5_DANRE1.378e-3541.71Major facilitator superfamily domain-containing pr... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3AF04FM1 AbsDev Citrus clementina cDNA clone KN0AAI3AF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873393 ID=FC873393; Name=FC873393; organism=Citrus clementina; type=EST; length=856bp
GTTTTGTTCGATTATCACTCGGCGAGCAAAAATGGAGATGTTTTTTTATC
TGGTGTTTGGTGCGTTGGGTGCAGTGGTGGCTGCATTGGAGCTGAGTAAA
ACCAACAAAGATAGAATCAATACTTCATCGGCTTTCAATTCTTTCAAGAA
CAATTACCTTTTGGTTTACTCACTCATGATGGCTGGGGATTGGTTGCAGG
GTCCTTATGTCTACTACCTCTATAGTACTTATGGATTTGGAAAAGGGGAG
ATTGGGCAGCTATTTATAGCTGGTTTTGGGTCCTCCATGTTGTTCGGCAC
AATTGTCGGATCTCTAGCTGACAAACAGGGTCGAAAGAGGGCATGCGTGA
CGTATTGCCTAACATACATTCTAAGCTGCATCACTAAGCATTCTCCTCAA
TACAAAATTCTGATGATAGGTCGTATTTTGGGAGGTATCGCAACTTCTCT
CTTATTTTCAGCATTTGAGTCATGGCTTGTTGCAGAGCACAACAAGAGGG
GCTTTGAGCAACAATGGCTGTCTATAACATTCTCAAAGGCAATATTTCTT
GGAAATGGTCTTGTTGCTATTTTGTCTGGATTGTTTGGAAACCTTCTTGT
TGATTCATTTTCCCTCGGGCCTGTGGCCCCCTTTGATGCTGCTGCTTGCT
TTCTCGCGATTGGAATGGTCATTATTTTGTCTTCTTGGACCGAAAACTAT
GGAGATCCGTCAGAGAGCAAGGACTTGCTTACCCAATTCAGGGGTGCTGC
TGTGGCAATTGCTTCTGATGAAAAAATTGCCTTGCTGGGTGCTATCCAGT
CCTTTGTTTGAAAGGTCCATGTATACCCTTTGTGTTCCTCTGGGACTCCT
GCTTTT
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