FC873461

Overview
NameFC873461
Unique NameFC873461
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC873461 vs. ExPASy Swiss-Prot
Match: BCCIP_ARATH (Protein BCCIP homolog OS=Arabidopsis thaliana GN=At2g44510 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.237e-19
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 1 
Query:    1 LVSKIYKHKNANQKNNRNLIRRSGSDSGDGIVYVKPEDEIFHKLSLWSFSFPMHAQQVETQELKDYRLMGLVMAVEAAKISTFRQQLQYLV 273
            LV+KIYK KN  Q+  R+     G +  +  V++KPEDE+F +LS WSF+FPM +Q V +QE+K+Y+LMGLVMAVEA KI  FRQ L  L+
Sbjct:  240 LVTKIYKLKNPKQRKPRH-----GEEDIEDTVFLKPEDELFLELSSWSFTFPMRSQLVTSQEMKNYQLMGLVMAVEANKIPKFRQMLNSLI 325
The following BLAST results are available for this feature:
BLAST of FC873461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BCCIP_ARATH5.237e-1953.85Protein BCCIP homolog OS=Arabidopsis thaliana GN=A... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAI3BA04FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BA04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873461 ID=FC873461; Name=FC873461; organism=Citrus clementina; type=EST; length=627bp
CTAGTCAGTAAAATTTACAAGCACAAGAATGCAAACCAGAAAAATAACAG
AAACCTGATAAGGAGGTCAGGTAGTGACAGTGGTGATGGAATAGTGTACG
TCAAGCCAGAAGATGAAATTTTTCACAAGCTTAGCTTGTGGTCCTTTAGT
TTTCCCATGCACGCCCAGCAGGTTGAAACTCAGGAGCTAAAAGATTATCG
TTTAATGGGGTTAGTCATGGCTGTAGAGGCAGCCAAAATTTCAACATTCC
GCCAGCAGTTGCAGTATTTAGTTGTTGAATCTTGAGATCCACAGGTATTT
TTAGTCGCCAGATACTGGCGGGGTCTGGCTAGCAACTTTGAACTCCTGGT
TCTTCCATTTGTTTTCCCCTGGAGACGCTAGGAAAGCTATCTGTTTCAGT
AGGTACCAATTTTGAAGCCACGGCAACAATGAAACTACTTTTTGCTGACA
ATTTATAGCAATTGAAATATGTTAGGTATATACTTGGTGATGAATTTGCT
GTGACAAGTAGGCACATTAGGCTTAGGATTTTAGAGTTGGACTTTATGAC
GTGTAGTTGCAGTCTAAGTGCCTGTTTGGTATGGCTTATTTAAGAGCCAT
AAGTGCTTATTTAATCGTATAAGCACT
back to top