FC873500
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873500 vs. ExPASy Swiss-Prot
Match: ZIP4_ARATH (Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.299e-51 Identity = 102/151 (67.55%), Postives = 123/151 (81.46%), Query Frame = 2 Query: 251 CRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQGLTRATEEQGRVRSVDEDSDSGIVPVLEIKDRNVKVF 703 CRDD+AAF LKFVAIASIL++G GVAIPLIG++RRFL+T+G+LFVA KAFAAGVILATGFVHML+GG+EAL NPCLP+FPWSKFPFPGFFAMVA+L TLL+DF+GTQYYERKQ +A E + + +VPV+ + + KVF Sbjct: 18 CRDDSAAFLLKFVAIASILLAGAAGVAIPLIGRNRRFLQTEGNLFVAAKAFAAGVILATGFVHMLAGGTEALSNPCLPDFPWSKFPFPGFFAMVAALATLLVDFMGTQYYERKQERNQAATE-----AAAGSEEIAVVPVVGERVTDNKVF 163
BLAST of FC873500 vs. ExPASy Swiss-Prot
Match: IRT3_ARATH (Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.875e-50 Identity = 101/153 (66.01%), Postives = 122/153 (79.74%), Query Frame = 2 Query: 251 CRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQ--GLTRATEEQGRVRSVDEDSDSGIVPVLEIKDRNVKVF 703 CRDD+AAF LKFVAIASIL++G GV IPLIG++RRFL+TDG+LFV KAFAAGVILATGFVHML+GG+EAL NPCLP+FPWSKFPFPGFFAM+A+L+TL +DF+GTQYYERKQ + + E GR E S +VP++ + KVF Sbjct: 18 CRDDSAAFLLKFVAIASILLAGAAGVTIPLIGRNRRFLQTDGNLFVTAKAFAAGVILATGFVHMLAGGTEALKNPCLPDFPWSKFPFPGFFAMIAALITLFVDFMGTQYYERKQEREASESVEPFGR-----EQSPGIVVPMIGEGTNDGKVF 165
BLAST of FC873500 vs. ExPASy Swiss-Prot
Match: ZIP9_ARATH (Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.350e-32 Identity = 76/120 (63.33%), Postives = 87/120 (72.50%), Query Frame = 2 Query: 293 IASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQG--LTRATEEQGRVRSVDED 646 +ASILISG GV+IPL+G L +G L KAFAAGVILATGFVHMLSGGS+AL +PCLPEFPW FPFP FFAMVA+LLTLL DF+ T YYERKQ + ++ E G SV D Sbjct: 1 MASILISGAAGVSIPLVGT---LLPLNGGLMRGAKAFAAGVILATGFVHMLSGGSKALSDPCLPEFPWKMFPFPEFFAMVAALLTLLADFMITGYYERKQEKMMNQSVESLGTQVSVMSD 117
BLAST of FC873500 vs. ExPASy Swiss-Prot
Match: ZIP8_ARATH (Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.224e-25 Identity = 53/115 (46.09%), Postives = 75/115 (65.22%), Query Frame = 2 Query: 245 EDCRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERK 589 + C D A LK VAI +IL++ ++GVA PL ++ FL DG +F+ K FA+G+IL TGF+H+L E L +PCL + PW KFPF GF AM++ L+TL +D + T Y +K Sbjct: 39 DSCIDKTKALPLKIVAIVAILVTSMIGVAAPLFSRYVTFLHPDGKIFMIIKCFASGIILGTGFMHVLPDSFEMLSSPCLEDNPWHKFPFTGFVAMLSGLVTLAIDSIATSLYTKK 153
BLAST of FC873500 vs. ExPASy Swiss-Prot
Match: IRT1_ARATH (Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = 2 Query: 251 CRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQGL 598 C + A A LK +AI ILI+ ++GV PL ++ FL+ DG++F K FA+G+IL TGF+H+L E L + CL E PW KFPF GF AM++ L+TL +D + T Y K + Sbjct: 34 CVNKAKALPLKVIAIFVILIASMIGVGAPLFSRNVSFLQPDGNIFTIIKCFASGIILGTGFMHVLPDSFEMLSSICLEENPWHKFPFSGFLAMLSGLITLAIDSMATSLYTSKNAV 149
BLAST of FC873500 vs. ExPASy Swiss-Prot
Match: IRT2_ARATH (Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23 Identity = 51/123 (41.46%), Postives = 76/123 (61.79%), Query Frame = 2 Query: 251 CRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQGLTRATEEQ 619 C + A A LK VAI +IL + ++GV PL ++ FL+ DG+ F+ K F++G+IL TGF+H+L E L + CL + PW KFPF GF AM++ L+TL +D + T Y K + +E+ Sbjct: 37 CINKAKALPLKIVAIVAILTTSLIGVTSPLFSRYISFLRPDGNGFMIVKCFSSGIILGTGFMHVLPDSFEMLSSKCLSDNPWHKFPFAGFVAMMSGLVTLAIDSITTSLYTGKNSVGPVPDEE 159
BLAST of FC873500 vs. ExPASy Swiss-Prot
Match: ZIP5_ARATH (Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23 Identity = 56/114 (49.12%), Postives = 74/114 (64.91%), Query Frame = 2 Query: 245 EDCRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYER 586 +D + A A K AI S+L +G++GV PL+GK LK + + F TKAFAAGVILATGF+H+L G E L +PCL W +FPF GF AMVA++LTL +D T Y+ + Sbjct: 37 DDEANKAGAKKYKIAAIPSVLAAGVIGVMFPLLGKFFPSLKPETTFFFVTKAFAAGVILATGFMHVLPEGYEKLTSPCLKGEAW-EFPFTGFIAMVAAILTLSVDSFATSYFHK 149
BLAST of FC873500 vs. ExPASy Swiss-Prot
Match: ZIP1_ARATH (Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.161e-22 Identity = 59/134 (44.03%), Postives = 83/134 (61.94%), Query Frame = 2 Query: 269 AFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQGLTRATEEQGRVRSVDEDSDSGIVPV 670 A LK +IA +L++G VGV++PLIGK L+ + +F KAFAAGVIL TGFVH+L E L +PCL + KFPF GF AM++++ TL++D T YY+R+ +Q V VDE+ +G V + Sbjct: 47 ATKLKLGSIALLLVAGGVGVSLPLIGKRIPALQPENDIFFMVKAFAAGVILCTGFVHILPDAFERLSSPCLEDTTAGKFPFAGFVAMLSAMGTLMIDTFATGYYKRQHFSNNHGSKQVNV-VVDEEEHAGHVHI 179
BLAST of FC873500 vs. ExPASy Swiss-Prot
Match: ZIP3_ARATH (Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 58/136 (42.65%), Postives = 81/136 (59.56%), Query Frame = 2 Query: 245 EDCRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQ--YYERKQGLTRATEEQGRVRSVDED 646 +D + A A K AI ++LI+GI+GV PL+GK L+ + F TKAFAAGVILATGF+H+L E L++PCL W +FPF GF AM+A++LTL +D T Y + R ++ + SVD + Sbjct: 42 DDHENKAGARKYKIAAIPTVLIAGIIGVLFPLLGKVFPSLRPETCFFFVTKAFAAGVILATGFMHVLPEAYEMLNSPCLTSEAW-EFPFTGFIAMIAAILTLSVDTFATSSFYKSHCKASKRVSDGETGESSVDSE 176
BLAST of FC873500 vs. ExPASy Swiss-Prot
Match: ZIP10_ARATH (Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.022e-20 Identity = 49/132 (37.12%), Postives = 80/132 (60.61%), Query Frame = 2 Query: 251 CRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQGLTRATEEQGRVRSVDED 646 C D A +LK ++I SILI+ ++GV +P + + + S F+ K+FA+G+IL+TGF+H+L E L +PCL + PW KFPF GF AM++++ TL++D + T + K G + V + D++ Sbjct: 42 CIDKNKALDLKLLSIFSILITSLIGVCLPFFARSIPAFQPEKSHFLIVKSFASGIILSTGFMHVLPDSFEMLSSPCLNDNPWHKFPFAGFVAMMSAVFTLMVDSITTSVF-TKSGRKDLRADVASVETPDQE 172 The following BLAST results are available for this feature:
BLAST of FC873500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873500 ID=FC873500; Name=FC873500; organism=Citrus clementina; type=EST; length=704bpback to top |