FC873566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873566 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.100e-43 Identity = 96/281 (34.16%), Postives = 146/281 (51.96%), Query Frame = 3 Query: 6 KLLGEQTDIANRAGDISLWFIGILYFFVFSLTIQKYLQAQLKNMIVGWLSAVAFAVHVALSWIFVSKLNLGIPGAMSAMIIASWFIVIGQFVY-LFGGWCPNTWKGFSSAAFADLYPVLKLSISSGVMICLEFWYNALLVLLAGYMKNATIEISSFSICLNIISWEFMLVFGFLAASGVRVSNELGRGDAKAAKFSVKVAIATTTVIGFFFSLICLVFSRKLAHLFTSNDEVIEXXXXXXXXXXXXXXXNGFQAVLSXXXXXXXXXXXXXYINIICYYFIG 845 K +G+ IA+ + I +Y F + +Q++LQAQ + ++S F +H L+W+ + L+ G+ GA + + W +V +Y L C TW GFS+ AF ++P KL+++S VM+CLE WYN LV+++G + N TI + + SIC+ ++W+ + G AA VRVSNELG G+ + A SV V TT +I +I LVF L+ FTS+ EVI NG Q +LS Y+N++ YY IG Sbjct: 159 KTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMYILMSPNCKETWTGFSTRAFRGIWPYFKLTVASAVMLCLEIWYNQGLVIISGLLSNPTISLDAISICMYYLNWDMQFMLGLSAAISVRVSNELGAGNPRVAMLSVVVVNITTVLISSVLCVIVLVFRVGLSKAFTSDAEVIAAVSDLFPLLAVSIFLNGIQPILSGVAIGSGWQAVVAYVNLVTYYVIG 439
BLAST of FC873566 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19 Identity = 61/250 (24.40%), Postives = 110/250 (44.00%), Query Frame = 3 Query: 102 IQKYLQAQLKNMIVGWLSAVAFAVHVALSWIFVSK--LNLGIPGAMSAMIIASWFIVIGQFVYLFGGWCPNTWKGFSSAAFADLYPVLKLSISSGVMICLEFWYNALLVLLAGYMKNATIEISSFSICLNIISWEFMLVFGFLAASGVRVSNELGRGDAKAAKFSVKVAIATTTVIGFFFSLICLVFSRKLAHLFTSNDEVIEXXXXXXXXXXXXXXXNGFQAVLSXXXXXXXXXXXXXYINIICYYFIG 845 ++++LQ Q V ++ A+ +++ L+++FV + G GA A+ + W +Y+ W GFS A + P+ +L++ +MIC E+W L+ +G + T E++S S+ + + L FG AA+ RV N +G G+ K AK + V+I IG ++I + ++FTS+ +V+ + Q V +N I YY +G Sbjct: 236 LKRFLQVQGIFHPVTYILAIVVPINIFLNYLFVWSPWVGFGFLGAPVAVALTLWSACAVLIIYIMKVNGRQAWGGFSREALKNWGPLCRLAVPGVIMICSEYWAFELVTFASGVL--GTTELASMSVLSTTSTLSYNLAFGVAAAAATRVGNLIGAGNTKLAKLATHVSINLGAAIGVIIAVILFLTRNTWTYIFTSDKDVVALVATIIPLVALINIADNTQCVAGGLLRGQGRQRIGGVVNFIAYYLLG 483
BLAST of FC873566 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17 Identity = 60/210 (28.57%), Postives = 112/210 (53.33%), Query Frame = 3 Query: 84 FVFSLTIQKYLQAQ---LKNMIVGWLSAVAFAVHVALSWIFVSKLNLGIPGAMSAMIIASWFIVIGQFVYLFGGWCPN-TWKGFSSAAFADLYPVLKLSISSGVMICLEFWYNALLVLLAGYMKNATIEISSFSICLNIISWEFMLVFGFLAASGVRVSNELGRGDAKAAKFSVKVAIATTTVIGFFFSLICLVFSRKLAHLFTSNDEVI 701 F++ L + KYL Q L ++ G A V+ +++F+ +L+LG+ G+ A +I+ + + + F+Y+ G TW G+S D L+L+I S +M+C+E+W + L+G + +E+ + SI + +M+ GF A+ VRV N LG GD + A+ S V++ T + FS++ L + ++FT++ ++I Sbjct: 169 FLYMLQV-KYLLNQGIVLPQIVTG---VAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDWASFLRLAIPSMLMLCMEWWAYEVGSFLSGIL--GMVELGAQSIVYELAIIVYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDII 372
BLAST of FC873566 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17 Identity = 55/245 (22.45%), Postives = 112/245 (45.71%), Query Frame = 3 Query: 126 LKNMIVGWLSAVAFA----VHVALSWIFVSKLNLGIPGAMSAMIIASWFIVIGQFVYL-FGGWCPNTWKGFSSAAFADLYPVLKLSISSGVMICLEFWYNALLVLLAGYMKNATIEISSFSICLNIISWEFMLVFGFLAASGVRVSNELGRGDAKAAKFSVKVAIATTTVIGFFFSLICLVFSRKLAHLFTSNDEVIEXXXXXXXXXXXXXXXNGFQAVLSXXXXXXXXXXXXXYINIICYYFIG 845 L+N + W + A ++ ++++F+ L LG+ G+ +A I+ + + + +VY+ + TW G+S + ++L++ S +M+C+E+W + LAG + E+ + S+ + + +M GF A+ VRV N LG G+ + AK S KVA+ ++ + + +A++FT+ +E++ + + NI+ YYF+G Sbjct: 196 LQNQGIIWPQVITGAAGNILNALINYVFLHLLELGVAGSAAANTISQYSLAVFLYVYIRWKNLHKATWDGWSRDCLQEWGAFIRLALPSMLMLCVEWWTYEIGGFLAGLISET--ELGAQSVVYELATIAYMFPLGFAVAASVRVGNALGAGNTERAKLSAKVALVCGVLVSCVVATLIGCTKDVIAYIFTTEEEIVSRVSQVMIMYGFFHLFDAIAGITGGIVRGAGKQLLGALCNIVGYYFVG 438
BLAST of FC873566 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.069e-16 Identity = 59/210 (28.10%), Postives = 109/210 (51.90%), Query Frame = 3 Query: 84 FVFSLTIQKYLQAQ---LKNMIVGWLSAVAFAVHVALSWIFVSKLNLGIPGAMSAMIIASWFIVIGQFVYLFGGWCPN-TWKGFSSAAFADLYPVLKLSISSGVMICLEFWYNALLVLLAGYMKNATIEISSFSICLNIISWEFMLVFGFLAASGVRVSNELGRGDAKAAKFSVKVAIATTTVIGFFFSLICLVFSRKLAHLFTSNDEVI 701 F++ L + KYL Q L ++ G A V+ +++F+ +L+LG G+ A +I+ + + + F Y+ G TW G+S D L L++ S +M+C+E+W + L+G + +E+ + SI + +M+ GF A+ VRV N LG GD + A+ S V++ T + FS++ L + ++FT++ ++I Sbjct: 169 FLYMLQV-KYLLNQGIVLPQIVTG---VAANLVNALANYLFLHQLHLGAIGSALANLISQYTLALLLFFYILGKKLHQATWGGWSLECLQDWASFLHLAVPSMLMLCMEWWAYEVGSFLSGIL--GMVELGAQSIVYELAIIVYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDII 372
BLAST of FC873566 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.941e-16 Identity = 59/210 (28.10%), Postives = 108/210 (51.43%), Query Frame = 3 Query: 84 FVFSLTIQKYLQAQ---LKNMIVGWLSAVAFAVHVALSWIFVSKLNLGIPGAMSAMIIASWFIVIGQFVYLFGGWCPN-TWKGFSSAAFADLYPVLKLSISSGVMICLEFWYNALLVLLAGYMKNATIEISSFSICLNIISWEFMLVFGFLAASGVRVSNELGRGDAKAAKFSVKVAIATTTVIGFFFSLICLVFSRKLAHLFTSNDEVI 701 F+++L + KYL Q L ++ G A V+ +++FV +L+LG+ G+ A +A + + + F+Y+ TW G+S D +L+I S +M+C+E+W + L+G + +E+ + S+ + +M+ G A VRV N LG G+ + AK S VA+ T +I F ++ L + ++FTS+ ++I Sbjct: 168 FLYTLQV-KYLLNQGIVLPQVVTG---VAANLVNALANYLFVYQLHLGVMGSALANTVAQFTLALLLFLYILRSKVYQATWGGWSLECLQDWASFFRLAIPSMLMLCMEWWAYEIGSFLSGIL--GMVELGAQSVTYELAVIVYMIPMGLSVAVNVRVGNALGAGNIEQAKKSSAVALLVTELIAVVFCVMLLSCKDLVGYIFTSDRDII 371
BLAST of FC873566 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.638e-15 Identity = 65/258 (25.19%), Postives = 117/258 (45.35%), Query Frame = 3 Query: 84 FVFSLTIQKYLQAQ---LKNMIVGWLSAVAFAVHVALSWIFVSKLNLGIPGAMSAMIIASWFIVIGQFVY-LFGGWCPNTWKGFSSAAFADLYPVLKLSISSGVMICLEFWYNALLVLLAGYMKNATIEISSFSICLNIISWEFMLVFGFLAASGVRVSNELGRGDAKAAKFSVKVAIATTTVIGFFFSLICLVFSRKLAHLFTSNDEVIEXXXXXXXXXXXXXXXNGFQAVLSXXXXXXXXXXXXXYINIICYYFIG 845 F+++L + KYL Q L ++ G A V+ +++F+ L+LG+ G+ A I+ + + I F+Y L+ TW G+S D L+L+I S +M+C+E+W + L+G + +E+ + SI + +M+ GF A+ VRV N LG G+ AK S +++ T + F ++ L + ++FT++ +++ G +N I YY IG Sbjct: 169 FLYTLQV-KYLLNQGIVLPQIMTG---IAANLVNALANYVFLYHLHLGVMGSALANTISQFALAIFLFLYILWRRLHQATWGGWSWECLQDWASFLRLAIPSMLMLCIEWWAYEVGSFLSGIL--GMVELGAQSITYELAIIVYMIPSGFSVAANVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDRDIVALVAQVIPIYAVSHLFEGLACTCGGILRGTGNQKVGAIVNAIGYYVIG 420
BLAST of FC873566 vs. ExPASy Swiss-Prot
Match: YL47_SCHPO (Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe GN=SPAC323.07c PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.445e-15 Identity = 61/202 (30.20%), Postives = 94/202 (46.53%), Query Frame = 3 Query: 102 IQKYLQAQLKNMIVGWLSAVAFAVHVALSWIFV--SKLNLGIPGAMSAMIIASWFIVIGQFVYLFGGWCPNTWKGFSSAAFADLYPVLKLSISSGVMICLEFWYNALLVLLAGYMKNATIEISSFSICLNIISWEFMLVFGFLAASGVRVSNELGRGDAKAAKFSVKVAIATTTVIGFFFSLICLVFSRKLAHLFTSNDEVI 701 +++YLQAQ + ++ A +++ L+++ V + G GA A+ WF I +Y+ P W GFS A +L P+L S +MI E+ + L AGY+ T ++S SI L S F + F F AS RV + +G G A A+ +VA + I F + F LFTS+ EV+ Sbjct: 230 LKRYLQAQGIFTPITYVLCFAAPLNILLNYLLVWHPTIGFGFLGAPVAVATTFWFQSICLILYICFSSTPIPWPGFSRQALKNLSPMLHFSFHGMLMIVTEWAAYEMTSLGAGYL--GTAPLASQSILLTSTSLLFQIPFAFAVASSTRVGHLIGSGRANLARLCSRVAYSLALCISIFDGSLIFCFRDVWGSLFTSDPEVL 429
BLAST of FC873566 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.499e-15 Identity = 60/212 (28.30%), Postives = 109/212 (51.42%), Query Frame = 3 Query: 84 FVFSLTIQKYLQAQ---LKNMIVGWLSAVAFAVHVALSWIFVSKLNLGIPGAMSAMIIASWFIVIGQFVYLFGGWCP---NTWKGFSSAAFADLYPVLKLSISSGVMICLEFWYNALLVLLAGYMKNATIEISSFSICLNIISWEFMLVFGFLAASGVRVSNELGRGDAKAAKFSVKVAIATTTVIGFFFSLICLVFSRKLAHLFTSNDEVI 701 F+F L +YLQ+Q + +IVG A V+V ++ + L+LG+ G+ A + +F+ F+Y++ W +TW G++ F + +L+I S M+C+E+W + LAG + N T E+ + ++ + S +M+ FGF A+ VRV N LG G+A A+ S + V ++ +A++FT++ ++I Sbjct: 178 FLFQLQT-RYLQSQGIIMPQVIVG---IAANVVNVGMNAFLLYALDLGVVGSAWANTTSQFFLSALLFLYVW--WKRIHIHTWGGWTRECFQEWSSYTRLAIPSMFMVCIEWWTFEIGTFLAGLV-NVT-ELGAQAVIYELASVAYMVPFGFGVAASVRVGNALGAGNADQARCSCTTVLLCAGVCALLVGILLAALKDVVAYIFTNDKDII 381
BLAST of FC873566 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 58/210 (27.62%), Postives = 110/210 (52.38%), Query Frame = 3 Query: 84 FVFSLTIQKYLQAQ---LKNMIVGWLSAVAFAVHVALSWIFVSKLNLGIPGAMSAMIIASWFIVIGQFVYLFGGWCPN-TWKGFSSAAFADLYPVLKLSISSGVMICLEFWYNALLVLLAGYMKNATIEISSFSICLNIISWEFMLVFGFLAASGVRVSNELGRGDAKAAKFSVKVAIATTTVIGFFFSLICLVFSRKLAHLFTSNDEVI 701 F+++L + KYL Q L +I G A V+ +++F+ +L+LG+ G+ A I+ + + I F+Y+ + TW G+S D L+L+I S +M+C+E+W + L+G + +E+ + SI + +M+ GF A+ VRV N LG G+ AK S +++ T + F ++ L + ++FT++ +++ Sbjct: 168 FLYTLQV-KYLLNQGIVLPQVITG---IAANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYILWRKLHHATWGGWSWECLQDWASFLQLAIPSMLMLCIEWWAYEVGSFLSGIL--GMVELGAQSITYELAIIVYMIPAGFSVAANVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDWDIV 371 The following BLAST results are available for this feature:
BLAST of FC873566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873566 ID=FC873566; Name=FC873566; organism=Citrus clementina; type=EST; length=845bpback to top |