FC873624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 4.021e-28 Identity = 58/89 (65.17%), Postives = 71/89 (79.78%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 GQV++SLAPCI +LR GG P CCNGVRSLN AA+TT DRQAAC CLK A+ +I+G+ N+AAGLP +CG+ +PYKISPSTDC V+ Sbjct: 4 GQVSSSLAPCINYLRAGG-VVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.996e-27 Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 GQV++SLAPCI +L GG PP CC+GV+SLN AA+TTPDRQAAC CLK AY +I G+ AA P +CG+ IPYKISPSTDCS+V+ Sbjct: 29 GQVSSSLAPCISYLTKGGAVPPA-CCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.446e-27 Identity = 53/89 (59.55%), Postives = 71/89 (79.78%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 GQV+++LAPCIP++R GG PP CCNG+R++N ARTTPDRQAAC CLK+ ++ G+ PN AA LP +CG+ IPY+ISPST+C+ V+ Sbjct: 30 GQVSSNLAPCIPYVRGGGAVPPA-CCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK 117
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.905e-27 Identity = 54/89 (60.67%), Postives = 69/89 (77.53%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 GQVT+SLAPCI ++R+GG PP CCNG+R++NG ARTT DRQ AC CLK +I G+ PN AAGLP +CG+ +PYKIS ST+C+ V+ Sbjct: 28 GQVTSSLAPCIGYVRSGGAVPPA-CCNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK 115
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.690e-26 Identity = 53/89 (59.55%), Postives = 70/89 (78.65%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 GQV+++LAPCIP++R GG PP CCNG+R++N ARTTPDRQAAC CLK+ ++ G+ PN AA LP +CG+ IPYKIS ST+C+ V+ Sbjct: 4 GQVSSALAPCIPYVRGGGAVPPA-CCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVHIPYKISASTNCATVK 91
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 4.162e-25 Identity = 52/89 (58.43%), Postives = 68/89 (76.40%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 GQV++SLAPCI ++R GG PP CCNG+R++N ARTTPDR+ AC CLK+ +I G+ PN AA LP +CG+ IPYKIS ST+C+ V+ Sbjct: 4 GQVSSSLAPCIGYVRGGGAVPPA-CCNGIRNVNNLARTTPDRRTACNCLKQLSGSISGVNPNNAAALPGKCGVNIPYKISASTNCATVK 91
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25 Identity = 56/91 (61.54%), Postives = 68/91 (74.73%), Query Frame = 3 Query: 45 SGQVTASLAPCIPFLR-TGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 SGQVT SLAPCI +LR +G PP CC G++SLN AA+TTP RQAAC C+K A I GI +A+GLP +CG+ IPYKISPSTDC+ V+ Sbjct: 30 SGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25 Identity = 56/91 (61.54%), Postives = 68/91 (74.73%), Query Frame = 3 Query: 45 SGQVTASLAPCIPFLR-TGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 SGQVT SLAPCI +LR +G PP CC G++SLN AA+TTP RQAAC C+K A I GI +A+GLP +CG+ IPYKISPSTDC+ V+ Sbjct: 26 SGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.523e-24 Identity = 48/88 (54.55%), Postives = 67/88 (76.14%), Query Frame = 3 Query: 51 QVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 QV+A+LAPCI ++R+GG PP CCNG++++NG A+TTPDRQAAC CLK ++ G+ P A LP +CG+ +PYKIS ST+C+ V+ Sbjct: 29 QVSANLAPCINYVRSGGAVPPA-CCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK 115
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.848e-24 Identity = 48/89 (53.93%), Postives = 67/89 (75.28%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 GQV+++LAPCI ++R GG PP CCNG+R++N A+TT DRQ AC CLK+ ++ G+ N AA LP +CG+ +PYKISPST+C+ V+ Sbjct: 30 GQVSSNLAPCIAYVRGGGAVPPA-CCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATVK 117 The following BLAST results are available for this feature:
BLAST of FC873624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873624 ID=FC873624; Name=FC873624; organism=Citrus clementina; type=EST; length=427bpback to top |