FC873630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873630 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.239e-21 Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 2 Query: 2 CPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQG 175 CPLE ATCC+DHYSCCPHDYPICNVR GTC MSK NPLGV+A++R A+P A GN G Sbjct: 284 CPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGG 341
BLAST of FC873630 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.369e-20 Identity = 40/50 (80.00%), Postives = 46/50 (92.00%), Query Frame = 2 Query: 2 CPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKP 151 CPLE ATCCDDHYSCCPH+YPICNV+ GTCLM+KD+PL V+AL+RT AKP Sbjct: 395 CPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKP 444
BLAST of FC873630 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20 Identity = 36/57 (63.16%), Postives = 49/57 (85.96%), Query Frame = 2 Query: 2 CPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQ 172 CPLEAATCCDD+YSCCPH+YP+C++ GTCL+SK++P V+AL+R PA P+W+ G + Sbjct: 403 CPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRK 459
BLAST of FC873630 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.016e-15 Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 2 Query: 2 CPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAK 148 CP+E ATCC DH SCCP DYP+CN RAGTC SK++PL V+AL+RT AK Sbjct: 414 CPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 462 The following BLAST results are available for this feature:
BLAST of FC873630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873630 ID=FC873630; Name=FC873630; organism=Citrus clementina; type=EST; length=663bpback to top |