FC873720

Overview
NameFC873720
Unique NameFC873720
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig137 contig Ccv1_Contig137:30..822. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC873720 vs. ExPASy Swiss-Prot
Match: BT3L4_XENTR (Transcription factor BTF3 homolog 4 OS=Xenopus tropicalis GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.665e-40
Identity = 82/146 (56.16%), Postives = 110/146 (75.34%), Query Frame = 1 
Query:   49 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 483
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K++ ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   E++DD+VPELV
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEVKQITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKASKPEDIEEEDDDVPELV 146
[Close]
BLAST of FC873720 vs. ExPASy Swiss-Prot
Match: BT3L4_XENLA (Transcription factor BTF3 homolog 4 OS=Xenopus laevis GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.665e-40
Identity = 82/146 (56.16%), Postives = 110/146 (75.34%), Query Frame = 1 
Query:   49 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 483
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K++ ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   E++DD+VPELV
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEVKQITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKASKPEDIEEEDDDVPELV 146
[Close]
BLAST of FC873720 vs. ExPASy Swiss-Prot
Match: BT3L4_BOVIN (Transcription factor BTF3 homolog 4 OS=Bos taurus GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.052e-39
Identity = 80/146 (54.79%), Postives = 110/146 (75.34%), Query Frame = 1 
Query:   49 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 483
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++LPGI++QLG D+L +LRKLAEQF +Q  ++ T  P   ++++D+VP+LV
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKTPKPEDIDEEEDDVPDLV 146
[Close]
BLAST of FC873720 vs. ExPASy Swiss-Prot
Match: BT3L4_PONAB (Transcription factor BTF3 homolog 4 OS=Pongo abelii GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.292e-39
Identity = 80/146 (54.79%), Postives = 109/146 (74.66%), Query Frame = 1 
Query:   49 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 483
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   +++DD+VP+LV
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV 146
[Close]
BLAST of FC873720 vs. ExPASy Swiss-Prot
Match: BT3L4_MOUSE (Transcription factor BTF3 homolog 4 OS=Mus musculus GN=Btf3l4 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.292e-39
Identity = 80/146 (54.79%), Postives = 109/146 (74.66%), Query Frame = 1 
Query:   49 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 483
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   +++DD+VP+LV
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV 146
[Close]
BLAST of FC873720 vs. ExPASy Swiss-Prot
Match: BT3L4_HUMAN (Transcription factor BTF3 homolog 4 OS=Homo sapiens GN=BTF3L4 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.292e-39
Identity = 80/146 (54.79%), Postives = 109/146 (74.66%), Query Frame = 1 
Query:   49 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 483
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   +++DD+VP+LV
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV 146
[Close]
BLAST of FC873720 vs. ExPASy Swiss-Prot
Match: BTF3_MOUSE (Transcription factor BTF3 OS=Mus musculus GN=Btf3 PE=2 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 9.027e-39
Identity = 84/146 (57.53%), Postives = 108/146 (73.97%), Query Frame = 1 
Query:   49 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 483
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F +   VI F NPKVQAS+AANT+ ++G  +TK+L ++LP I+NQLG D+L +LR+LAE   KQ+ + G     T EDDDDEVP+LV
Sbjct:   48 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDEVPDLV 192
[Close]
BLAST of FC873720 vs. ExPASy Swiss-Prot
Match: BTF3_HUMAN (Transcription factor BTF3 OS=Homo sapiens GN=BTF3 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.027e-39
Identity = 84/146 (57.53%), Postives = 108/146 (73.97%), Query Frame = 1 
Query:   49 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 483
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F +   VI F NPKVQAS+AANT+ ++G  +TK+L ++LP I+NQLG D+L +LR+LAE   KQ+ + G     T EDDDDEVP+LV
Sbjct:   50 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDEVPDLV 194
[Close]
BLAST of FC873720 vs. ExPASy Swiss-Prot
Match: BT3L4_DANRE (Transcription factor BTF3 homolog 4 OS=Danio rerio GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.011e-38
Identity = 81/146 (55.48%), Postives = 109/146 (74.66%), Query Frame = 1 
Query:   49 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 483
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  +TK+L ++LPGI++QLG D+L +LRKLAEQF +Q  +         +++DD+VP+LV
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLVVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAETKQLTEMLPGILSQLGADSLTSLRKLAEQFPRQVLDNKAPKAEDIDEEDDDVPDLV 146
[Close]
BLAST of FC873720 vs. ExPASy Swiss-Prot
Match: BT3L4_CHICK (Transcription factor BTF3 homolog 4 OS=Gallus gallus GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.303e-37
Identity = 78/145 (53.79%), Postives = 107/145 (73.79%), Query Frame = 1 
Query:   49 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPEL 480
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++LPGI++QLG D+L +LRKLAEQF +Q  ++        +++DD+VP+L
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKSEDIDEEDDDVPDL 145
The following BLAST results are available for this feature:
BLAST of FC873720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
BT3L4_XENTR3.665e-4056.16Transcription factor BTF3 homolog 4 OS=Xenopus tro... [more]
BT3L4_XENLA3.665e-4056.16Transcription factor BTF3 homolog 4 OS=Xenopus lae... [more]
BT3L4_BOVIN4.052e-3954.79Transcription factor BTF3 homolog 4 OS=Bos taurus ... [more]
BT3L4_PONAB5.292e-3954.79Transcription factor BTF3 homolog 4 OS=Pongo abeli... [more]
BT3L4_MOUSE5.292e-3954.79Transcription factor BTF3 homolog 4 OS=Mus musculu... [more]
BT3L4_HUMAN5.292e-3954.79Transcription factor BTF3 homolog 4 OS=Homo sapien... [more]
BTF3_MOUSE9.027e-3957.53Transcription factor BTF3 OS=Mus musculus GN=Btf3 ... [more]
BTF3_HUMAN9.027e-3957.53Transcription factor BTF3 OS=Homo sapiens GN=BTF3 ... [more]
BT3L4_DANRE2.011e-3855.48Transcription factor BTF3 homolog 4 OS=Danio rerio... [more]
BT3L4_CHICK1.303e-3753.79Transcription factor BTF3 homolog 4 OS=Gallus gall... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CG10FM1 AbsDev Citrus clementina cDNA clone KN0AAI3CG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873720 ID=FC873720; Name=FC873720; organism=Citrus clementina; type=EST; length=793bp
TCTTCTTCACCTAATTCTTTGTCCCCACACAAAAACCCTAGCTCCAAGAT
GAATGTGGAGAAGCTAATGAAGATGGCCGGTGCAGTTCGCACTGGTGGTA
AGGGTAGTGTGAGAAGAAAGAAGAAGGCTGTTCATAAGACAACAACCACC
GATGACAAGAGGCTTCAGAGCACCTTGAAGAGAATAGGAGTGAATGCTAT
TCCTGCAATTGAGGAAGTTAACATTTTCAAGGATGACGTCGTTATTCAGT
TCTTAAATCCCAAAGTACAAGCTTCAATTGCTGCCAACACATGGGTAGTT
AGTGGTGCCCCACAAACCAAGAAGTTGCAGGATATTCTCCCTGGAATTAT
CAATCAATTGGGGCCAGATAATTTGGACAACCTGAGGAAGTTGGCGGAGC
AGTTTCAGAAGCAAGCACCTAATGCAGGAACTGGTGCACCCACGACTCAA
GAGGACGACGACGATGAGGTCCCAGAGCTTGTGGCAGGCGAGACGTTTGA
AGCTGCCGCAGAGGAGAAAACAGAGAAACCTGACGCTGCTTCTTAGAGAG
TTTTATCTAGAGGGACTTTGTGTTATTCTATATATTTTCTATGTTTTTTG
AGTTTTTATTTTACTTTTCCGAGTCAACTTTCTCTTGTTTTATCTGATTC
TCCCTGTGACACTAGATATTGTTACTTTTTAATTCAATGTTTTGCTCCAG
TGAAACCAGTGAAAACCCTTTTACTCTTTCAGAATCCGGAGGCACTGTTG
CAATGGCTTTCTATTGTGCATTTTGTTGTAAGTCTGATGTTGT
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