FC873732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873732 vs. ExPASy Swiss-Prot
Match: YGI3_SCHPO (Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe GN=SPBC2A9.03 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14 Identity = 63/241 (26.14%), Postives = 108/241 (44.81%), Query Frame = 1 Query: 40 HFQLRNLLWATSKHDVYLMQNYSLMHWSSLLRRGKEVLNVAKPIVPTIKRPGLSAQSLNRVQISTMAVKDNLMVAGGFHGELICKYLDQPGVAFCTNLTTDDNAITNTVDVFRSPNGSKRVIAANNDAKVRIFDAENFSCLNRFSYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFT 762 H L + +H V + N S+ ++L +++++ I L + IS + + + G +G+ C + + G +F T +DD+ N + +F K+ I ND V + D + S + + +VN + + L V DS + ++ D +S V+ L H D +WHP+G ILA+G QDTT ++WDIR L +S L M A+ L F+ Sbjct: 134 HHHLCKSVKVVGEHSVIYVSNNSIRMENTLHDNSVQIIDLKNNI-------------LQKKAISCLDTTNAVGCLGTLYGQY-CIFNFKNG-SFSTRKLSDDSI--NHIQLF----SEKKFILGCNDGAVYVEDVQRTSPILVYRCSNAVNCVQLFDETPLALVCTDSKDAMLIDIRSNSVSAKLP-HSDSVLTGSWHPNGNILATGGQDTTAKVWDIRALGKSFRNLGSQMSAVTNLCFS 352
BLAST of FC873732 vs. ExPASy Swiss-Prot
Match: YY46_ANASP (Uncharacterized WD repeat-containing protein alr3466 OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11 Identity = 43/136 (31.62%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 379 SPNGSKRVIAANNDAKVRIFDAENFSCLNRFSYDWS-VNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDRPVLA 783 +P+GS + + ++D VR+++ + CL F S VN+ +PDG +LA + D S K +GH ++ + A++PDG +LASG+ D T RLW+I + S+ L +G+ + ++ F+ D +LA Sbjct: 1209 NPDGST-LASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISS-SKCLHTFQGHTSWVSSVTFSPDGTMLA 1342 HSP 2 Score: 68.5514 bits (166), Expect = 4.637e-11 Identity = 41/131 (31.30%), Postives = 71/131 (54.20%), Query Frame = 1 Query: 394 KRVIAANNDAKVRIFDAENFSCLNRFSYDWS-VNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDRPVLA 783 K + + ++D VR++D + CL F S V + SP+ +LA + D SG+ +GH + ++ A++ DG +LA+G+ D T RLWDI + SQ + +G+ +R++ F+SD +LA Sbjct: 919 KMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISS-SQCFYIFQGHTSCVRSVVFSSDGAMLA 1048
BLAST of FC873732 vs. ExPASy Swiss-Prot
Match: Y2124_ANASP (Uncharacterized WD repeat-containing protein all2124 OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.550e-11 Identity = 68/262 (25.95%), Postives = 119/262 (45.42%), Query Frame = 1 Query: 46 QLRNLLWATSKHDVYLMQNYSLMHWSSLLRRGKEVLNV-AKP------IVPTIKRPGLSAQSLNRVQ------ISTMAVKDNLMVAGGFHGELICKYLDQPGVAFCTNLTTDDNAITNTVDVFRSPNGSKRVIAANNDAKVRIFDAENFSCLNRFS-YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDRPVLAMA 789 Q R + S L+ + L + L+ ++V +V A P V T+++ Q NR++ IS +D +A G + I K + G F T L ++A+ + V SP+G + + + +D ++++ + + L + ++ +VNN SPDGK LA + D SG++ L GH + PDG+ +A+G++D T +LW R + L L G+ + +L F+ D LA A Sbjct: 1003 QFREIAALNSSSQANLLSHQQLAALIASLKAAQQVNHVIAVPNNLKLATVTTLQQALFEMQERNRLEGHKDGVISISISRDGQTIASGSLDKTI-KLWSRDGRLFRT-LNGHEDAVYS---VSFSPDG-QTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWH-RQDGKLLKTLNGHQDWVNSLSFSPDGKTLASA 1257 HSP 2 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 54/205 (26.34%), Postives = 99/205 (48.29%), Query Frame = 1 Query: 187 RPGLSAQSLNRVQISTMAVK---DNLMVAGGFHGELICKYLDQPGVAFCTNLTTDDNAITNTVDVFRSPNGSKRVIAANNDAKVRIFDAENFSCLNRFS-YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDRPVLAMA 789 R G ++LN + + +V D +A G + I + G T +T + + N V+ SP+G K + +A++D ++++D + L + + V SPDG+ +A + + Q GK+ L GH D+ + ++ PDG+ LAS + D T +LW I + + + LKG+ ++ + F+SD +A A Sbjct: 1101 RDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKT-ITGHEQTVNN---VYFSPDG-KNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIAD-GKLVKTLKGHNDSVWDVNFSSDGKAIASA 1299
BLAST of FC873732 vs. ExPASy Swiss-Prot
Match: YQ95_SCHPO (Uncharacterized WD repeat-containing protein C18.05c OS=Schizosaccharomyces pombe GN=SPCC18.05c PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.637e-11 Identity = 35/127 (27.56%), Postives = 69/127 (54.33%), Query Frame = 1 Query: 394 KRVIAANNDAKVRIFDAENFS--CLNRFSYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSD 768 +R+++A++D ++ ++D + + + VN+ S SPDG+ +A + + D ++GK L+GH+ + AW D R+L S +QDTT ++WD+R+ L G+ + A+ ++ D Sbjct: 359 ERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFD-LPGHEDQVFAVDWSPD 484 The following BLAST results are available for this feature:
BLAST of FC873732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873732 ID=FC873732; Name=FC873732; organism=Citrus clementina; type=EST; length=789bpback to top |