FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC873743_ssr41 microsatellite FC873743_ssr41:41..50. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig5940 contig Ccv1_Contig5940:15..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 6.289e-98
Identity = 174/191 (91.10%), Postives = 185/191 (96.86%), Query Frame = 3
Query:  189 DNDLLKRHRPDMDSDKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            D D LKR RP++DSDKEMSAAVI+GNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGE+VAIKKVLQDRRYKNRELQLMR MDHPNVISLKHCFFSTTS+DELFLNLVMEYVPET+YRVL+HY+S NQRMP+ YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH++
Sbjct:   21 DGDALKR-RPELDSDKEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRPMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLRHYTSSNQRMPIFYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQV 210          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 354.755 bits (909), Expect = 3.121e-97
Identity = 172/188 (91.49%), Postives = 183/188 (97.34%), Query Frame = 3
Query:  195 DLLKRHRPDMDSDKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHR 758
            D LKR RPD+D+DKEMSAAVI+GNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGE+VAIKKVLQDRRYKNRELQLMRLMDHPNV+SLKHCFFSTT++DELFLNLVMEYVPET+YRVLKHY+S NQRMP+ YVKLYTYQIFRGLAYIHT PGVCHRDVKPQNLLVDPLTH+
Sbjct:   25 DSLKR-RPDIDNDKEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRLMDHPNVVSLKHCFFSTTTRDELFLNLVMEYVPETLYRVLKHYTSSNQRMPIFYVKLYTYQIFRGLAYIHTAPGVCHRDVKPQNLLVDPLTHQ 211          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: KSG7_ARATH (Shaggy-related protein kinase eta OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 1.659e-90
Identity = 160/180 (88.89%), Postives = 170/180 (94.44%), Query Frame = 3
Query:  222 MDSDKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            M  DKEM AAV+ G+D VTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMR+MDHPNV+ LKHCFFSTTSKDELFLNLVMEYVPE++YRVLKHYSS NQRMPL+YVKLY YQIFRGLAYIH V GVCHRD+KPQNLLVDPLTH++
Sbjct:    1 MADDKEMPAAVVDGHDQVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVVCLKHCFFSTTSKDELFLNLVMEYVPESLYRVLKHYSSANQRMPLVYVKLYMYQIFRGLAYIHNVAGVCHRDLKPQNLLVDPLTHQV 180          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: KSG3_ARATH (Shaggy-related protein kinase gamma OS=Arabidopsis thaliana GN=ASK3 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.273e-82
Identity = 146/193 (75.65%), Postives = 166/193 (86.01%), Query Frame = 3
Query:  189 DNDLLKRHRPDM--DSDKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            D D L     DM    DKEM A ++ GN   TGHII TTIGG+NG+PKQTISYMAERVVG GSFG+VFQAKCLETGETVAIKKVLQDRRYKNRELQ MRL+DHPNV+SLKHCFFSTT KDEL+LNLV+EYVPET++RV+KHY+ +NQRMPL+YVKLYTYQIFR L+YIH   GVCHRD+KPQNLLV+P TH++
Sbjct:   21 DADRLPEEMKDMKIQDDKEMEATIVNGNVTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLVYVKLYTYQIFRSLSYIHRCIGVCHRDIKPQNLLVNPHTHQV 213          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MSK1_MEDSA (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.663e-82
Identity = 145/192 (75.52%), Postives = 167/192 (86.98%), Query Frame = 3
Query:  192 NDLLKRHRPDMD--SDKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            +D+L     DM    D+EM A V+ GN   TGHII TTIGG+NG+PKQTISYMAERVVG GSFG+VFQAKCLETGETVAIKKVLQD+RYKNRELQ MRL+DHPNV+SLKHCFFSTT KDEL+LNLV+EYVPET++RV+KHYS +NQRMP+IYVKLYTYQIFR L+YIH   GVCHRD+KPQNLLV+P TH++
Sbjct:   24 DDILPEEMSDMKIRDDREMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYSKLNQRMPMIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQV 215          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: KSG1_ARATH (Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=2 SV=3)

HSP 1 Score: 305.449 bits (781), Expect = 2.172e-82
Identity = 147/191 (76.96%), Postives = 165/191 (86.39%), Query Frame = 3
Query:  195 DLLKRHRPDMD--SDKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            D L     DM    DKEM A V+ GN   TGHII TTIGG+NG+PKQTISYMAERVVG GSFG+VFQAKCLETGETVAIKKVLQDRRYKNRELQ MRL+DHPNV+SLKHCFFSTT KDEL+LNLV+EYVPET++RV+KHY+ +NQRMPLIYVKLYTYQIFR L+YIH   GVCHRD+KPQNLLV+P TH++
Sbjct:   19 DKLPEEMNDMKIRDDKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQV 209          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 8.252e-82
Identity = 145/177 (81.92%), Postives = 159/177 (89.83%), Query Frame = 3
Query:  231 DKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            DKEM AAV+ GN   TGHII TTIGGKNG+PKQTISYMAER+VG GSFGIVFQAKCLETGETVAIKKVLQD+RYKNRELQ MRL+DHPNV+SLKHCFFSTT KDEL+LNLV+EYVPET+YRV KHYS  NQRMP+IYVKLYTYQI R LAYIH   GVCHRD+KPQNLLV+P TH++
Sbjct:   38 DKEMEAAVVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERIVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVYRVSKHYSRANQRMPIIYVKLYTYQICRALAYIHGGVGVCHRDIKPQNLLVNPHTHQV 214          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MSK3_MEDSA (Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 7.723e-80
Identity = 142/178 (79.78%), Postives = 160/178 (89.89%), Query Frame = 3
Query:  231 DKEMSAA-VIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            DKEM AA ++ GN   TGHII TTIGGKNG+PKQTISYMAERVVG GSFG+VFQAKCLETGETVAIKKVLQD+RYKNRELQ MRL+DHPNV+SLKHCFFSTT KDEL+LNLV+EYVPET+ RV++HY+ MNQRMP+IYVKLY+YQI R LAYIH   GVCHRD+KPQNLLV+P TH+L
Sbjct:   37 DKEMEAATIVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVSRVIRHYNKMNQRMPMIYVKLYSYQICRALAYIHNSIGVCHRDIKPQNLLVNPHTHQL 214          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MSK1_TOBAC (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.247e-79
Identity = 136/177 (76.84%), Postives = 160/177 (90.40%), Query Frame = 3
Query:  231 DKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            DKE+ AA++ GN   TGHII TTIGG++G+PKQTISYMAER+VG GSFG+VFQAKCLETGETVAIKKVLQD+RYKNRELQ MRL+DHPNV+ LKHCFFSTT KDE++LNLV+EYVPET++RV+KHY+ +NQRMPLI VKLYTYQIFR L+YIH   GVCHRD+KPQNLLV+P TH++
Sbjct:   37 DKEIEAAIVDGNGTETGHIIVTTIGGRHGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVCLKHCFFSTTEKDEVYLNLVLEYVPETVHRVIKHYNKLNQRMPLILVKLYTYQIFRALSYIHHTIGVCHRDIKPQNLLVNPHTHQV 213          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MSK2_MEDSA (Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 5.006e-79
Identity = 138/177 (77.97%), Postives = 157/177 (88.70%), Query Frame = 3
Query:  231 DKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            DKEM A V+ GN    GH+I TTIGGKNG+PKQTISYMAER VG GSFG+VFQAKCLETGETVAIKKVLQD+RYKNRELQ MRL+DHPNV++LKHCFFSTT KDEL+LNLV+E+VPET++RV++HYS MNQRMPLIYVKLY+YQI R LAYIH   GV HRD+KPQNLLV+P TH+L
Sbjct:   38 DKEMEAHVVDGNSTEAGHVIVTTIGGKNGQPKQTISYMAERAVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVTLKHCFFSTTEKDELYLNLVLEFVPETVHRVIRHYSKMNQRMPLIYVKLYSYQICRSLAYIHNCVGVSHRDIKPQNLLVNPHTHQL 214          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
KSG9_ARATH6.289e-9891.10Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
KSG6_ARATH3.121e-9791.49Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
KSG7_ARATH1.659e-9088.89Shaggy-related protein kinase eta OS=Arabidopsis t... [more]
KSG3_ARATH1.273e-8275.65Shaggy-related protein kinase gamma OS=Arabidopsis... [more]
MSK1_MEDSA1.663e-8275.52Glycogen synthase kinase-3 homolog MsK-1 OS=Medica... [more]
KSG1_ARATH2.172e-8276.96Shaggy-related protein kinase alpha OS=Arabidopsis... [more]
KSG5_ARATH8.252e-8281.92Shaggy-related protein kinase epsilon OS=Arabidops... [more]
MSK3_MEDSA7.723e-8079.78Glycogen synthase kinase-3 homolog MsK-3 OS=Medica... [more]
MSK1_TOBAC2.247e-7976.84Shaggy-related protein kinase NtK-1 OS=Nicotiana t... [more]
MSK2_MEDSA5.006e-7977.97Glycogen synthase kinase-3 homolog MsK-2 OS=Medica... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
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