FC873776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873776 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 5.766e-43 Identity = 89/102 (87.25%), Postives = 92/102 (90.20%), Query Frame = 3 Query: 6 DSRFALENYKNLANRSLVDDVLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 311 DSRFALENYKNLANRSLVDD L KVN LKPIA ELGV LAQLAIAWCASNPNVSSVITGATKE+QI ENMKA+DVIPLLTP V+DKIEA V SKPKR ESYR Sbjct: 227 DSRFALENYKNLANRSLVDDTLRKVNGLKPIASELGVSLAQLAIAWCASNPNVSSVITGATKENQIVENMKALDVIPLLTPEVVDKIEAVVQSKPKRTESYR 328
BLAST of FC873776 vs. ExPASy Swiss-Prot
Match: KCAB2_RAT (Voltage-gated potassium channel subunit beta-2 OS=Rattus norvegicus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.593e-14 Identity = 42/106 (39.62%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 3 PDSRFALENYKNLANRSLVDDVLN---KVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 311 P SR +L+ Y+ L ++ L ++ K+ L+ IA+ LG L QLAIAWC N VSSV+ GA+ Q+ EN+ AI V+P L+ S++ +I++ + +KP + YR Sbjct: 261 PYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKPYSKKDYR 366
BLAST of FC873776 vs. ExPASy Swiss-Prot
Match: KCAB2_MOUSE (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.593e-14 Identity = 42/106 (39.62%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 3 PDSRFALENYKNLANRSLVDDVLN---KVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 311 P SR +L+ Y+ L ++ L ++ K+ L+ IA+ LG L QLAIAWC N VSSV+ GA+ Q+ EN+ AI V+P L+ S++ +I++ + +KP + YR Sbjct: 261 PYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKPYSKKDYR 366
BLAST of FC873776 vs. ExPASy Swiss-Prot
Match: KCAB2_HUMAN (Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens GN=KCNAB2 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 9.593e-14 Identity = 42/106 (39.62%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 3 PDSRFALENYKNLANRSLVDDVLN---KVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 311 P SR +L+ Y+ L ++ L ++ K+ L+ IA+ LG L QLAIAWC N VSSV+ GA+ Q+ EN+ AI V+P L+ S++ +I++ + +KP + YR Sbjct: 261 PYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPYSKKDYR 366
BLAST of FC873776 vs. ExPASy Swiss-Prot
Match: KCAB2_BOVIN (Voltage-gated potassium channel subunit beta-2 OS=Bos taurus GN=KCNAB2 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.593e-14 Identity = 42/106 (39.62%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 3 PDSRFALENYKNLANRSLVDDVLN---KVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 311 P SR +L+ Y+ L ++ L ++ K+ L+ IA+ LG L QLAIAWC N VSSV+ GA+ Q+ EN+ AI V+P L+ S++ +I++ + +KP + YR Sbjct: 261 PYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASSADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPYSKKDYR 366
BLAST of FC873776 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.137e-13 Identity = 41/104 (39.42%), Postives = 65/104 (62.50%), Query Frame = 3 Query: 9 SRFALENYKNLANRSLVDDVLNKVNRLK---PIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 311 SR +L+ Y+ L R + ++ + N+LK PIA+ LG L QLA+AWC N VSSV+ G++ Q+ EN+ AI V+P +T V+++I+ + +KP + YR Sbjct: 297 SRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYR 400
BLAST of FC873776 vs. ExPASy Swiss-Prot
Match: KCAB1_RABIT (Voltage-gated potassium channel subunit beta-1 OS=Oryctolagus cuniculus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.137e-13 Identity = 41/104 (39.42%), Postives = 65/104 (62.50%), Query Frame = 3 Query: 9 SRFALENYKNLANRSLVDDVLNKVNRLK---PIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 311 SR +L+ Y+ L R + ++ + N+LK PIA+ LG L QLA+AWC N VSSV+ G++ Q+ EN+ AI V+P +T V+++I+ + +KP + YR Sbjct: 315 SRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYR 418
BLAST of FC873776 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.137e-13 Identity = 41/104 (39.42%), Postives = 65/104 (62.50%), Query Frame = 3 Query: 9 SRFALENYKNLANRSLVDDVLNKVNRLK---PIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 311 SR +L+ Y+ L R + ++ + N+LK PIA+ LG L QLA+AWC N VSSV+ G++ Q+ EN+ AI V+P +T V+++I+ + +KP + YR Sbjct: 304 SRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYR 407
BLAST of FC873776 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.137e-13 Identity = 41/104 (39.42%), Postives = 65/104 (62.50%), Query Frame = 3 Query: 9 SRFALENYKNLANRSLVDDVLNKVNRLK---PIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 311 SR +L+ Y+ L R + ++ + N+LK PIA+ LG L QLA+AWC N VSSV+ G++ Q+ EN+ AI V+P +T V+++I+ + +KP + YR Sbjct: 297 SRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYR 400
BLAST of FC873776 vs. ExPASy Swiss-Prot
Match: KCAB1_HUMAN (Voltage-gated potassium channel subunit beta-1 OS=Homo sapiens GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.137e-13 Identity = 41/104 (39.42%), Postives = 65/104 (62.50%), Query Frame = 3 Query: 9 SRFALENYKNLANRSLVDDVLNKVNRLK---PIADELGVPLAQLAIAWCASNPNVSSVITGATKESQIQENMKAIDVIPLLTPSVMDKIEAAVLSKPKRPESYR 311 SR +L+ Y+ L R + ++ + N+LK PIA+ LG L QLA+AWC N VSSV+ G++ Q+ EN+ AI V+P +T V+++I+ + +KP + YR Sbjct: 315 SRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYR 418 The following BLAST results are available for this feature:
BLAST of FC873776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873776 ID=FC873776; Name=FC873776; organism=Citrus clementina; type=EST; length=582bpback to top |