FC873810

Overview
NameFC873810
Unique NameFC873810
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length791
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1228 contig Ccv1_Contig1228:1..791. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873810 vs. ExPASy Swiss-Prot
Match: ILL3_ARATH (IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsis thaliana GN=ILL3 PE=2 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 2.100e-96
Identity = 175/235 (74.47%), Postives = 200/235 (85.11%), Query Frame = 1
Query:   82 DEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            D+   NQ +  A  DK+WLVSVRRQIHENPELLFE H TSALIRRELD+LG+ Y+YPVAKTGIVAQIGSG  PVVALRADMDALPLQELVEW+HKSKIDGKMHACGHD HTTMLLGAAKLL +RK  L GTVR+LFQPAEEGGAGAFHMIKEGALGDSEAIFGMH+  G+PTG +A+ISGP LA+TS+F+V++ G+   ++  +S +DP+L ASS ILALQ +ISRE DPL S V
Sbjct:   23 DQEYPNQYLTEALGDKEWLVSVRRQIHENPELLFELHKTSALIRRELDELGVSYSYPVAKTGIVAQIGSGYPPVVALRADMDALPLQELVEWDHKSKIDGKMHACGHDSHTTMLLGAAKLLSKRKRMLNGTVRLLFQPAEEGGAGAFHMIKEGALGDSEAIFGMHVHTGLPTGELATISGPALASTSIFSVRMSGKSPASSETYSCVDPVLAASSTILALQLIISREVDPLLSHV 257          
BLAST of FC873810 vs. ExPASy Swiss-Prot
Match: ILL5_ORYSJ (IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sativa subsp. japonica GN=ILL5 PE=2 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.755e-80
Identity = 147/224 (65.62%), Postives = 181/224 (80.80%), Query Frame = 1
Query:  115 AQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            A++++DW+V VRR+IH +PEL F EH+TSAL+R EL++LG+  A  VA TG+VA +GSG  PVVALRADMDALP+QELVEWEHKSK+DG MHACGHDVHT MLLGAAKLL +RK++++GTVR+LFQPAEEGGAGA +MIK+G L   EAIFGMH+D  +PTG IA+ +GP  AA   +  K+EG+ G A  PH  +DPI+ AS VIL+LQQLISRE DPL S V
Sbjct:   30 AEEERDWMVGVRRRIHAHPELAFREHHTSALVRDELERLGLT-ARAVAGTGVVADVGSGLPPVVALRADMDALPVQELVEWEHKSKVDGVMHACGHDVHTAMLLGAAKLLSERKEQIKGTVRLLFQPAEEGGAGASYMIKDGVLDGVEAIFGMHVDYRMPTGVIAAHAGPTQAAVCFYEAKIEGKTGKAETPHLNVDPIVAASFVILSLQQLISREDDPLHSQV 252          
BLAST of FC873810 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSJ (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.848e-76
Identity = 135/218 (61.93%), Postives = 171/218 (78.44%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            W+V +RR+IHENPEL +EE  TS L+RRELD LGIPY +P A TG+VA +G+G  P VALRADMDALP+QE VEWEHKSK+ GKMH CGHD H  MLLG+A++L + +D+L+GTV ++FQPAEEGG GA  MI +GA+ + EAIFG+H+   +P G +AS  GP +A +  F   + G+GGHAA+PH TIDPIL AS+VI++LQQL+SREADPL S V
Sbjct:   48 WMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKGTVVLVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQV 265          
BLAST of FC873810 vs. ExPASy Swiss-Prot
Match: ILL9_ORYSJ (IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sativa subsp. japonica GN=ILL9 PE=2 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 5.377e-76
Identity = 133/222 (59.91%), Postives = 173/222 (77.93%), Query Frame = 1
Query:  130 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI---GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            +WL  VRR+IH +PEL FEE  TS L+R ELD +G+PY +PVA+TG+VA I   G G  PVVALRADMDALP+QELV+WEHKS+ +GKMHACGHD HT MLLGAAKLL +RK++L+GTV+++FQPAEEG AGA+++++EG L D  A+FGMH+D  +P G +A+  GP  A +  F   + G+GGHAA PH  IDP++ AS+ IL+LQQ+++RE DPLQ  V
Sbjct:   50 EWLRGVRRRIHRHPELAFEEVRTSELVRAELDAIGVPYQWPVARTGVVATIAGGGGGDGPVVALRADMDALPVQELVDWEHKSQENGKMHACGHDAHTAMLLGAAKLLQKRKNELKGTVKLVFQPAEEGSAGAYYVLQEGVLDDVSAMFGMHVDPALPVGVVAARPGPFAATSGRFLATITGKGGHAAFPHDAIDPVVAASNAILSLQQIVAREIDPLQGAV 271          
BLAST of FC873810 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 5.377e-76
Identity = 134/218 (61.47%), Postives = 170/218 (77.98%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            W+V +RR+IHENPEL +EE  TS L+RRELD LGIPY +P A TG+VA +G+G  P VALRADMDALP+QE VEWEHKSK+ GKMH CGHD H  MLLG+A++L + +D+L+GTV ++FQPAEEGG GA  MI +G + + EAIFG+H+   +P G +AS  GP +A +  F   + G+GGHAA+PH TIDPIL AS+VI++LQQL+SREADPL S V
Sbjct:   48 WMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKGTVVLVFQPAEEGGGGAKKMIDDGTVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQV 265          
BLAST of FC873810 vs. ExPASy Swiss-Prot
Match: ILL4_ARATH (IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 2.043e-75
Identity = 132/219 (60.27%), Postives = 170/219 (77.63%), Query Frame = 1
Query:  130 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            DW+V +RR+IHENPEL +EE  TS L+R EL+K+G+ Y YPVA TG+V  +G+G  P VALRADMDAL +QE+VEWEHKSK+ GKMHACGHD HTTMLLGAAKLL + +++L+GTV ++FQPAEEGG GA  +++ G L +  AIFG+H+   +  G ++S  GP LA +  F  K+ G+GGHAA+P  TIDPIL AS+VI++LQ L+SREADPL S V
Sbjct:   46 DWMVGIRRRIHENPELGYEEVETSKLVRAELEKMGVSYKYPVAVTGVVGYVGTGHAPFVALRADMDALAMQEMVEWEHKSKVPGKMHACGHDAHTTMLLGAAKLLKEHEEELQGTVVLVFQPAEEGGGGAKKIVEAGVLENVSAIFGLHVTNQLALGQVSSREGPMLAGSGFFKAKISGKGGHAALPQHTIDPILAASNVIVSLQHLVSREADPLDSQV 264          
BLAST of FC873810 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 5.945e-75
Identity = 137/219 (62.56%), Postives = 168/219 (76.71%), Query Frame = 1
Query:  130 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            DW+V +RR+IHENPEL +EE  TS LIR EL+ +GI Y YPVA TG++  IG+G  P VALRADMDALP+QE VEWEHKSKI GKMHACGHD H TMLLGAAK+LH+ +  L+GTV ++FQPAEEG +GA  M +EGAL + EAIFG+H+   IP G  AS +G  LA   VF   + G+GGHAA+P  TIDP++ ASS++L+LQQL+SRE DPL S V
Sbjct:   49 DWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKV 267          
BLAST of FC873810 vs. ExPASy Swiss-Prot
Match: ILL7_ORYSJ (IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica GN=ILL7 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.259e-74
Identity = 135/222 (60.81%), Postives = 172/222 (77.48%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI----GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            WL  +RR IH +PEL FEE  TS L+R ELD +G+PY +PVA+TG+VA I    G+G+  V ALRADMDALPLQELV+WEHKS+  GKMHACGHD HTTMLLGAAKLL  +KD L+GTV+++FQPAEEG AGA ++++EG L D  AIFG+H+D  I  G++ S  GP LAA+  F   + G+GGHAA PH+ +DPILTASS I++LQQ+++RE DPL++ V
Sbjct:   65 WLRGLRRSIHRHPELAFEEVRTSELVRAELDAIGVPYEWPVARTGVVATIAGGDGAGAGTVFALRADMDALPLQELVDWEHKSEESGKMHACGHDAHTTMLLGAAKLLQSQKDDLKGTVKLVFQPAEEGYAGARYVLQEGVLDDVSAIFGLHVDPRIQVGTVTSRPGPFLAASGRFLATITGKGGHAAGPHNAVDPILTASSAIVSLQQIVARETDPLEAAV 286          
BLAST of FC873810 vs. ExPASy Swiss-Prot
Match: ILL8_ORYSJ (IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sativa subsp. japonica GN=ILL8 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.853e-74
Identity = 129/220 (58.64%), Postives = 170/220 (77.27%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI--GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            WL  +RR+IH+ PEL F+E  TS L+R ELD +G+PYA+PVA+TG+VA I  G+G+ PVVALRADMDALPLQELV+WE KS+  GKMHACGHD H TMLLGAAKLL  RKD+L+GT++++FQPAEEG AGA+H+++ G L D   IFG+H+   +P G +AS  GP ++A + F     G+GGHA +PH  +DP++  SS +L+LQQL+SRE DPL++ V
Sbjct:   56 WLSGLRRRIHQRPELAFQEVRTSELVRAELDAIGVPYAWPVARTGVVATIDGGAGAGPVVALRADMDALPLQELVDWEFKSQEKGKMHACGHDAHVTMLLGAAKLLQSRKDELKGTIKLVFQPAEEGHAGAYHVLESGLLDDVSVIFGLHVIPNLPVGVVASRPGPFMSAAARFAATFTGKGGHAGVPHDAVDPVVAVSSAVLSLQQLVSRETDPLEAAV 275          
BLAST of FC873810 vs. ExPASy Swiss-Prot
Match: ILL3_ORYSJ (IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sativa subsp. japonica GN=ILL3 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.853e-74
Identity = 128/220 (58.18%), Postives = 167/220 (75.91%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI--GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            WL  +RR+IH++PEL F+EH TSAL+R ELD LG+ Y +PVA+TG+VA +   +G  PV  LRADMDALP+QE+VEWE KS  DGKMHACGHDVH  MLLGAAKLL  R+D   G V+++FQPAEEG AG +++++EGA+ D + IFGMH+D G+P G +AS  GP LA ++ F   + G+GGHAA PH  +DPI+  SS +L+LQQ+++RE DPLQ  V
Sbjct:   25 WLRGLRRRIHQHPELAFQEHRTSALVRAELDALGVAYVWPVAQTGVVATVVGAAGPGPVFGLRADMDALPIQEMVEWEFKSLEDGKMHACGHDVHVAMLLGAAKLLQSRRDHFNGKVKLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATINGKGGHAAAPHHAVDPIVAVSSAVLSLQQIVARETDPLQGAV 244          
The following BLAST results are available for this feature:
BLAST of FC873810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
ILL3_ARATH2.100e-9674.47IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsi... [more]
ILL5_ORYSJ2.755e-8065.63IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sati... [more]
ILL1_ORYSJ1.848e-7661.93IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL9_ORYSJ5.377e-7659.91IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sati... [more]
ILL1_ORYSI5.377e-7661.47IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL4_ARATH2.043e-7560.27IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsi... [more]
ILL2_ARATH5.945e-7562.56IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL7_ORYSJ2.259e-7460.81IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sati... [more]
ILL8_ORYSJ3.853e-7458.64IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sati... [more]
ILL3_ORYSJ3.853e-7458.18IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DC12FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DC12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873810 ID=FC873810; Name=FC873810; organism=Citrus clementina; type=EST; length=791bp
CAACGGATTGTTATTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGTATGTCT
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