FC873818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: 4CL2_SOYBN (4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2) HSP 1 Score: 425.246 bits (1092), Expect = 1.938e-118 Identity = 211/262 (80.53%), Postives = 230/262 (87.79%), Query Frame = 3 Query: 3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATIDVE 788 +D PPENCLHF+VLSEA+E +PEV I PDD VA+PFSSGTTGLPKGV+LTHKSL TSVAQQVDGENPNLYLT DV+LCVLPLFHI+SLNSVLLC+LRAG+ VLLMQKFEIG LLELIQRHRVS KNPMVAD+DLSSIR+VLSGAAPLGKELE+ALR+R+PQA+LGQGYGMTEAGPVLSMCLGFAKQPF TKSGSCGTVVRNAELKV+DPETG SL +NQPGEICIRG QIMKGYLND TA+TID E Sbjct: 170 VDDPPENCLHFSVLSEANESDVPEVEIHPDDAVAMPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMQKFEIGTLLELIQRHRVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEEALRNRMPQAVLGQGYGMTEAGPVLSMCLGFAKQPFQTKSGSCGTVVRNAELKVVDPETGRSLGYNQPGEICIRGQQIMKGYLNDEAATASTIDSE 431
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1) HSP 1 Score: 385.956 bits (990), Expect = 1.303e-106 Identity = 187/262 (71.37%), Postives = 219/262 (83.59%), Query Frame = 3 Query: 3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATIDVE 788 ID+ PE CLHF+VL++A+E IPEV I+PDD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGENPNLY+ + DV+LCVLPLFHIYSLNSVLLC LR GA +L+MQKF+I + LELIQR++V+ K+PMV DYDLSS+R V+SGAAPLGKELED +R++ P A LGQGYGMTEAGPVL+MCL FAK+PF KSG+CGTVVRNAE+K++DP+TG SLP NQ GEICIRG QIMKGYLNDPE TA TID E Sbjct: 152 IDSAPEGCLHFSVLTQANEHDIPEVEIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIHSEDVMLCVLPLFHIYSLNSVLLCGLRVGAAILIMQKFDIVSFLELIQRYKVTIGPFVPPIVLAIAKSPMVDDYDLSSVRTVMSGAAPLGKELEDTVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPKTGNSLPRNQSGEICIRGDQIMKGYLNDPEATARTIDKE 413
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: 4CL2_ORYSJ (Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2) HSP 1 Score: 382.874 bits (982), Expect = 1.103e-105 Identity = 191/262 (72.90%), Postives = 218/262 (83.21%), Query Frame = 3 Query: 6 DAPPENCLHF-TVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATIDVE 788 +A PE CL F ++++ADE +PEVAI PDDPVALPFSSGTTGLPKGVVLTH+S+++ VAQQVDGENPNL++ GDV LCVLPLFHI+SLNSVLLC++RAGA V LM +FE+GA+L I+R RV+ KNP V +DLSSIR+VLSGAAPLGKELEDALR+R+PQAI GQGYGMTEAGPVLSMC FAK+P P KSGSCGTVVRNAELKV+DP+TG SL N PGEICIRGPQIMKGYLNDPE TAATIDVE Sbjct: 182 EATPEGCLPFWDLIADADEGSVPEVAISPDDPVALPFSSGTTGLPKGVVLTHRSVVSGVAQQVDGENPNLHMGAGDVALCVLPLFHIFSLNSVLLCAVRAGAAVALMPRFEMGAMLGAIERWRVTVAAVVPPLVLALAKNPFVERHDLSSIRIVLSGAAPLGKELEDALRARLPQAIFGQGYGMTEAGPVLSMCPAFAKEPTPAKSGSCGTVVRNAELKVVDPDTGFSLGRNLPGEICIRGPQIMKGYLNDPEATAATIDVE 443
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: 4CL_PINTA (4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1) HSP 1 Score: 382.104 bits (980), Expect = 1.882e-105 Identity = 184/261 (70.50%), Postives = 215/261 (82.38%), Query Frame = 3 Query: 6 DAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATIDVE 788 DAP E C H +VL+EADE Q P V I PDD VALP+SSGTTGLPKGV+LTHK L++SVAQQVDGENPNLY + DV+LCVLPLFHIYSLNSVLLC+LRAGA L+MQKF + LELIQ+++V+ K+P+V+ YD+SS+R+++SGAAPLGKELEDALR R P+AI GQGYGMTEAGPVL+M L FAK PFP KSGSCGTVVRNA++K++D ETG SLPHNQ GEICIRGP+IMKGY+NDPE TAATID E Sbjct: 153 DAPKEGCQHISVLTEADETQCPAVKIHPDDVVALPYSSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSDDVILCVLPLFHIYSLNSVLLCALRAGAATLIMQKFNLTTCLELIQKYKVTVAPIVPPIVLDITKSPIVSQYDVSSVRIIMSGAAPLGKELEDALRERFPKAIFGQGYGMTEAGPVLAMNLAFAKNPFPVKSGSCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEE 413
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1) HSP 1 Score: 381.719 bits (979), Expect = 2.458e-105 Identity = 182/262 (69.47%), Postives = 217/262 (82.82%), Query Frame = 3 Query: 3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATIDVE 788 ID+ PE CLHF+ L+++DE +IPEV I+PDD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGEN NLY+ + DV++CVLPLFHIYSLNS+LLC LR GA +L+MQKF+I LELIQ+++VS K+P+V YDLSS+R V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+PF KSG+CGTVVRNAE+K++DP+TG SLP NQPGEICIRG QIMKGYLNDPE T TID E Sbjct: 157 IDSAPEGCLHFSELTQSDEHEIPEVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSEDVLMCVLPLFHIYSLNSILLCGLRVGAAILIMQKFDIAPFLELIQKYKVSIGPFVPPIVLAIAKSPIVDSYDLSSVRTVMSGAAPLGKELEDAVRTKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATTRTIDKE 418
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 2.081e-104 Identity = 179/262 (68.32%), Postives = 218/262 (83.21%), Query Frame = 3 Query: 3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATIDVE 788 +D+ PE C+HF+ L ++DE +IP+V I+PDD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGEN NLY+ + DV++CVLPLFHIYSLNSVLLC+LR GA +L+MQKF+I LELI +H+V+ K+P+V +YDLSS+R V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+PF KSG+CGTVVRNAE+K++DP+TG SLP NQPGEICIRG QIMKGYLNDPE TA TI+ E Sbjct: 155 VDSAPEGCVHFSELIQSDEHEIPDVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSDDVLMCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIAQFLELIPKHKVTIGPFVPPIVLAIAKSPLVHNYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATARTIEKE 416
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1) HSP 1 Score: 378.252 bits (970), Expect = 2.717e-104 Identity = 179/262 (68.32%), Postives = 218/262 (83.21%), Query Frame = 3 Query: 3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATIDVE 788 +D+ PE C+HF+ L ++DE +IP+V I+PDD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGEN NLY+ + DV++CVLPLFHIYSLNSVLLC+LR GA +L+MQKF+I LELI +H+V+ K+P+V +YDLSS+R V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+PF KSG+CGTVVRNAE+K++DP+TG SLP NQPGEICIRG QIMKGYLNDPE TA TI+ E Sbjct: 155 VDSVPEGCVHFSELIQSDEHEIPDVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSDDVLMCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIAQFLELIPKHKVTIGPFVPPIVLAIAKSPLVDNYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATARTIEKE 416
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1) HSP 1 Score: 370.933 bits (951), Expect = 4.338e-102 Identity = 180/256 (70.31%), Postives = 214/256 (83.59%), Query Frame = 3 Query: 21 NCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATIDVE 788 N LHF+ L+ ADE+++P+V I PD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGENPNLY+ + DV+LCVLPLFHIYSLNSVLLC LRAG+G+L+MQKFEI LELIQ+++V+ K+ +V +YDLSS+R V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+PF KSG+CGTVVRNAE+K++DPETG+SLP N PGEICIRG QIMKGYLNDPE TA TID E Sbjct: 167 NILHFSELTGADENEMPKVEISPDGVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYMHSDDVLLCVLPLFHIYSLNSVLLCGLRAGSGILIMQKFEIVPFLELIQKYKVTIGPFVPPIVLAIAKSTVVDNYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPETGSSLPRNHPGEICIRGDQIMKGYLNDPEATARTIDKE 422
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: 4CL1_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1) HSP 1 Score: 368.622 bits (945), Expect = 2.153e-101 Identity = 177/262 (67.56%), Postives = 213/262 (81.30%), Query Frame = 3 Query: 3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATIDVE 788 ID P++CLHF+ L EADE ++PEV I DD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDG+NPNLY+ + DV++C+LPLFHIYSLN+VL C LRAG +L+MQKF+I LELIQ+++V+ K+P+V YDLSS+R V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+P+ KSG+CGTVVRNAE+K++DPET ASLP NQ GEICIRG QIMKGYLNDPE T TID E Sbjct: 153 IDDAPQDCLHFSKLMEADESEMPEVVINSDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGDNPNLYMHSEDVMICILPLFHIYSLNAVLCCGLRAGVTILIMQKFDIVPFLELIQKYKVTIGPFVPPIVLAIAKSPVVDKYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPYEIKSGACGTVVRNAEMKIVDPETNASLPRNQRGEICIRGDQIMKGYLNDPESTRTTIDEE 414
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: 4CL2_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 2.812e-101 Identity = 177/262 (67.56%), Postives = 213/262 (81.30%), Query Frame = 3 Query: 3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATIDVE 788 ID P++CLHF+ L EADE ++PEV I DD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDG+NPNLY+ + DV++C+LPLFHIYSLN+VL C LRAG +L+MQKF+I LELIQ+++V+ K+P+V YDLSS+R V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+P+ KSG+CGTVVRNAE+K++DPET ASLP NQ GEICIRG QIMKGYLNDPE T TID E Sbjct: 153 IDDAPQDCLHFSKLMEADESEMPEVVIDSDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGDNPNLYMHSEDVMICILPLFHIYSLNAVLCCGLRAGVTILIMQKFDIVPFLELIQKYKVTIGPFVPPIVLAIAKSPVVDKYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPYEIKSGACGTVVRNAEMKIVDPETNASLPRNQRGEICIRGDQIMKGYLNDPESTRTTIDEE 414 The following BLAST results are available for this feature:
BLAST of FC873818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873818 ID=FC873818; Name=FC873818; organism=Citrus clementina; type=EST; length=788bpback to top |