FC873834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873834 vs. ExPASy Swiss-Prot
Match: CTR2_RAT (Low affinity cationic amino acid transporter 2 OS=Rattus norvegicus GN=Slc7a2 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.593e-12 Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 3 Query: 12 LLLCGLIVLTSINQDEARHNFGHAGGFMCPFVPLLPIACILINVYLLINLGSATWARVSVWLIIGVLVYVFYGRTHS 242 L+LC ++LT Q + + FM PF+P LP IL+N+YL++ L + TW R S+W+++G L+Y YG HS Sbjct: 533 LVLCAAVILTIWRQPQNQQKVA----FMVPFLPFLPAFSILVNIYLMVQLSADTWVRFSIWMVLGFLIYFAYGIRHS 605
BLAST of FC873834 vs. ExPASy Swiss-Prot
Match: CTR2_MOUSE (Low affinity cationic amino acid transporter 2 OS=Mus musculus GN=Slc7a2 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 9.855e-12 Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 3 Query: 12 LLLCGLIVLTSINQDEARHNFGHAGGFMCPFVPLLPIACILINVYLLINLGSATWARVSVWLIIGVLVYVFYGRTHS 242 L+LC ++LT Q + + FM PF+P LP IL+N+YL++ L + TW R S+W+ +G L+Y YG HS Sbjct: 533 LVLCAAVILTIWRQPQNQQKVA----FMVPFLPFLPAFSILVNIYLMVQLSADTWIRFSIWMALGFLIYFAYGIRHS 605
BLAST of FC873834 vs. ExPASy Swiss-Prot
Match: CTR2_PIG (Low affinity cationic amino acid transporter 2 OS=Sus scrofa GN=SLC7A2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.681e-11 Identity = 32/77 (41.56%), Postives = 46/77 (59.74%), Query Frame = 3 Query: 12 LLLCGLIVLTSINQDEARHNFGHAGGFMCPFVPLLPIACILINVYLLINLGSATWARVSVWLIIGVLVYVFYGRTHS 242 L+LC +VLT Q + + FM PF+P LP IL+N+YL++ L + TW R S+W+ +G L+Y YG HS Sbjct: 533 LVLCVAVVLTIWRQPQNQQKVA----FMVPFLPFLPAFSILVNIYLMVQLSADTWIRFSIWMALGFLIYFAYGIRHS 605
BLAST of FC873834 vs. ExPASy Swiss-Prot
Match: CTR1_HUMAN (High affinity cationic amino acid transporter 1 OS=Homo sapiens GN=SLC7A1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11 Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 3 Query: 6 GALLLCGLIVLTSINQDEARHNFGHAGGFMCPFVPLLPIACILINVYLLINLGSATWARVSVWLIIGVLVYVFYGRTHS 242 G+ LLC ++ Q E++ F PF+P+LPI I +NVYL++ L TW R +VW++IG ++Y YG HS Sbjct: 534 GSALLCAVVTGVIWRQPESKTKLS----FKVPFLPVLPILSIFVNVYLMMQLDQGTWVRFAVWMLIGFIIYFGYGLWHS 608
BLAST of FC873834 vs. ExPASy Swiss-Prot
Match: CTR1_MOUSE (High affinity cationic amino acid transporter 1 OS=Mus musculus GN=Slc7a1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.343e-11 Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 3 Query: 6 GALLLCGLIVLTSINQDEARHNFGHAGGFMCPFVPLLPIACILINVYLLINLGSATWARVSVWLIIGVLVYVFYGRTHS 242 G++LLC L+ Q E++ F PFVP+LP+ I +N+YL++ L TW R +VW++IG +Y YG HS Sbjct: 527 GSVLLCMLVTGIIWRQPESKTKLS----FKVPFVPVLPVLSIFVNIYLMMQLDQGTWVRFAVWMLIGFTIYFGYGIWHS 601 The following BLAST results are available for this feature:
BLAST of FC873834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873834 ID=FC873834; Name=FC873834; organism=Citrus clementina; type=EST; length=607bpback to top |