FC873871

Overview
NameFC873871
Unique NameFC873871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14925 contig Ccv1_Contig14925:163..945. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873871 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 5.137e-71
Identity = 134/229 (58.52%), Postives = 166/229 (72.49%), Query Frame = 1
Query:  109 IVHDKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLGLLEQHGFARNRFWSLDEDASPLP--PANNQSTVDLILKSTEEDIKAWPRGFELRLRISISP-GKLTLIPRVR--NVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKEENLLTAE 780
            +V    GL +++L       AE+ LYGGQV SWKN+  EELLF+SSK+ +KPPKAIRGGIP+C PQFG  G LEQHGFARNRFWS+D D  PLP  PA  ++ VDLIL+  EED+K WP  FE RLR+++ P G L+L  R+R  N D + FS+ FA   Y  VSDISEVRVEGLET+DY D L  KERFTEQ DAI F+ E+D+VYL+ P+KIAIIDHEK++  +  +
Sbjct:   26 LVKTPSGLEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGGIPICLPQFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPA-IKAFVDLILRPAEEDLKIWPHSFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDISEVRVEGLETMDYLDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTK 253          
BLAST of FC873871 vs. ExPASy Swiss-Prot
Match: YMY9_YEAST (Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae GN=YMR099C PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.265e-18
Identity = 70/227 (30.84%), Postives = 103/227 (45.37%), Query Frame = 1
Query:  139 IILTEPTG--SSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFG------NLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILK---STEEDIKAWPRGFELRLRISISPGKLTLIPRVRNV-DNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKEENLLTAER 783
            ++LT P    +S  +L YG  V SWK  + EE L++S+ +     K +RGGIP+ FP FG      +L  L QHG ARN  W         PP     TV   LK   +  E  K WP  + L L + +    L     V N   +K   F +    Y  + DI    V  L  +  +D L+ KE + ++   +TF+ E D +Y +   + AI   +K   + T +R
Sbjct:   10 VVLTHPADETTSVHILKYGATVYSWKL-KSEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHGLARNSTWEFLGQTKENPP-----TVQFGLKPEIANPELTKLWPMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQLL-KESYVDKHPVVTFNQETDVIYQNVSAERAIQIVDKGVQIHTLKR 229          
BLAST of FC873871 vs. ExPASy Swiss-Prot
Match: YEAD_ECOLI (Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli (strain K12) GN=yeaD PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.516e-17
Identity = 75/216 (34.72%), Postives = 103/216 (47.69%), Query Frame = 1
Query:  124 DGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLGL--LEQHGFARNRFWSL---DEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAI-TFDGEIDRVYLSTPTKIAIIDHE 753
            D L  I++  P    A   L G  ++SWK    EE+L++S+ + +K   AIRGG+PVC+P FG      L  HGFARN  W+L    EDA  +        +   L  +EE  K WP  F L     +  GK   I    + +   F    AL  Y +V DI++V V GL   D F   +N  +     D I TF    DRVYL+ P   ++I+ E
Sbjct:   24 DELDLIVVDHPQ-VKASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHHEDADGV-------ALTFELTQSEETKKFWPHDFTLLAHFRV--GKTCEIDLESHGE---FETTSALHTYFNVGDIAKVSVSGLG--DRFIDKVNDAKENVLTDGIQTFPDRTDRVYLN-PQDCSVINDE 223          
The following BLAST results are available for this feature:
BLAST of FC873871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AAPC_CENCI5.137e-7158.52Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
YMY9_YEAST2.265e-1830.84Glucose-6-phosphate 1-epimerase OS=Saccharomyces c... [more]
YEAD_ECOLI9.516e-1734.72Putative glucose-6-phosphate 1-epimerase OS=Escher... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3DF10FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DF10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873871 ID=FC873871; Name=FC873871; organism=Citrus clementina; type=EST; length=783bp
TAGTAATATTATTATCAAGAGCCAAACCTGGAGTGGAGAAAAGGGAAAGT
GAACCCATTTGTGAGCAGAATAAGGGCAAGGTTAGGGCCAACAGCTATGC
CATTGAATATAGTTCATGATAAAGATGGATTGCCCAGAATTATTTTGACT
GAGCCAACTGGGTCATCTGCTGAGGTGCTTCTCTATGGTGGGCAAGTTGT
TTCCTGGAAGAATGAACGAAGAGAAGAACTGCTTTTTATGAGCAGCAAGT
CTTTCTGGAAGCCACCTAAAGCCATCAGGGGAGGTATACCTGTCTGCTTC
CCACAGTTTGGAAATCTTGGTTTACTGGAGCAACATGGATTCGCAAGGAA
CAGATTTTGGTCATTGGATGAAGATGCTTCTCCTCTGCCCCCAGCTAACA
ACCAGTCAACAGTGGATCTGATATTGAAGTCCACAGAAGAGGATATAAAG
GCCTGGCCACGAGGCTTTGAGTTGCGTCTCCGTATTTCTATCAGTCCTGG
CAAGCTGACTTTGATCCCTCGTGTGAGGAATGTGGATAACAAGGCTTTCT
CTTTTATGTTCGCGCTGCGTAATTACTTATCTGTATCAGATATCAGTGAA
GTGCGTGTCGAAGGCTTGGAGACTCTTGATTACTTTGATTATCTGATGAA
TAAAGAAAGGTTCACAGAGCAGGCGGATGCAATTACCTTTGATGGCGAGA
TTGACAGAGTGTATTTGAGCACCCCAACAAAGATTGCCATTATTGACCAT
GAGAAAGAAGAGAACCTTTTGACTGCGGAAAGA
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