FC875261
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875261 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.524e-45 Identity = 105/190 (55.26%), Postives = 131/190 (68.95%), Query Frame = 1 Query: 118 SVVAARVTGIR-KSGVYQFSSVK--YLPGTLQRNVSLSVRCMAKNEQQKDQ-----------STQPP-----KLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 630 S+++ +T I +S V QF+++ Y+P TL+RNVSL VR MA+ E ++ ST P + P++STKFSD+ AFSGPAPERINGRLAMIGFVAA+ VE++KGQ + QLS GGVAWFLGT P F+GVSVESKS M+SDAE WNGR AM+GLVALA TEFVKG++LV Sbjct: 8 SIMSNSMTNISSRSRVNQFTNIPSVYIP-TLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196
BLAST of FC875261 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.572e-34 Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 1 Query: 199 LQRNVSLSVRCMAKN------EQQKDQSTQP------PKLPRISTKFS-DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 630 ++RN +VR M ++ +QQK Q T P ++TK + D+F+F G APERINGR AMIGFVAA+ VEL+ G+DVF+Q+ +GGV WFL T P+++G+S E+K++GF SDAE+WNGRFAM+GLVALA TE+VKG L+ Sbjct: 41 MRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197
BLAST of FC875261 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.253e-30 Identity = 78/185 (42.16%), Postives = 102/185 (55.14%), Query Frame = 1 Query: 79 MAASLATQSMLGSSVVAARVTGIRKSGVYQFSSVKYLPGTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 630 MA ++ S G++VV +S F + + LP +L R + Q + S PP P+ ST D AFSGPAPERINGRLAM+GFV ALAVE +G + +QL G G AWF T PL +G S E ++ M ++AELWNGRFAM+GLVALA TE + G+ + Sbjct: 1 MATMMSMSSFAGAAVVP-------RSSASSFGA-RSLP-------ALGRRALVVRAQTEGPSAPPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAPFI 170
BLAST of FC875261 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.253e-30 Identity = 71/156 (45.51%), Postives = 92/156 (58.97%), Query Frame = 1 Query: 169 FSSVKYLP-GTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 630 F+ LP G+ + +L R + Q + + PP P+ ST D AFSGPAPERINGRLAM+GFV ALAVE +G + +QL G G AWF T PL +G S E ++ M ++AELWNGRFAM+GLVALA TE + G+ + Sbjct: 10 FAGAAVLPRGSARSLPALGRRTLVVRAQTEGPNAPPPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITGTPFI 165
BLAST of FC875261 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.254e-29 Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 1 Query: 265 TQPPKLPRISTKFS-----DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLS--DGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 630 T P P+ TK + D AFSGPAPERINGRLAM+GFVAAL+VE ++G + Q+ G+AWFL T PL +G SVESKS G ++DAELWNGRFAM+GLVALA TEF+ G+ V Sbjct: 101 TTIPAAPKPVTKKANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229
BLAST of FC875261 vs. ExPASy Swiss-Prot
Match: CBR_DUNBA (Carotene biosynthesis-related protein CBR, chloroplastic OS=Dunaliella bardawil GN=CBR PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.264e-14 Identity = 61/162 (37.65%), Postives = 76/162 (46.91%), Query Frame = 1 Query: 172 SSVKYLPGTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPR--------ISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSD--GFMTSDAELWNGRFAMMGLVALAVTEFVKGSTL 627 +S+ P L R + C + + ST PP P + ++V FSG APE INGRLAM+GFVAAL ELS G+ V QL D L T P F K D G T DAE+ NGRFAM+G A+ V E ++G L Sbjct: 16 ASINVRPAPLLRTAAPKRVCKHIVRAENNPSTPPPSSPSPPPPPPTPAAPTVTEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAASLIPAF----ARRKGDAMGPFTPDAEMTNGRFAMIGFAAMLVYEGIQGIAL 171 The following BLAST results are available for this feature:
BLAST of FC875261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875261 ID=FC875261; Name=FC875261; organism=Citrus clementina; type=EST; length=724bpback to top |