FC875275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875275 vs. ExPASy Swiss-Prot
Match: YVRI_CAEEL (GILT-like protein F37H8.5 OS=Caenorhabditis elegans GN=F37H8.5 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.814e-18 Identity = 58/177 (32.77%), Postives = 92/177 (51.98%), Query Frame = 1 Query: 187 CFLSGFVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCI-ESLVYEHKYSH-WETCFDKLELD---PKPIVDCYTSGYGTQLELKYAAETNSLVP-PHQYVPWVVVDG 699 C + F R + N K+ + + E+LCP NF+ L I + + V++ L P+GNAK+ + T CQHG EC +N E C IDS + P + CI ESL + +++ + CF+KL++ + C S G L+ K AA T ++ P H++VPWV+++G Sbjct: 58 CGFASFCDKHRAATH--NQKINITVLIEALCPDCQNFLTKQLYPIVFK-NFANYVNIELVPFGNAKVLEDGTIKCQHGEEECSINKFEGCFIDSMQD-QSPLPTLSCIEESLQKKVEFADAVQQCFEKLQIGGDIQRLTQSCLVSKLGADLQNKAAAATANVWPEQHKFVPWVIING 230
BLAST of FC875275 vs. ExPASy Swiss-Prot
Match: GILT_HUMAN (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens GN=IFI30 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17 Identity = 56/169 (33.14%), Postives = 84/169 (49.70%), Query Frame = 1 Query: 247 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAK---IRANSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSHWETCFDKLE--LDPKPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGHHCMKTTKICSYI 738 V + LYYE+LC F+I L + + ++ I+++ L P+GNA+ + F CQHG EC N VEAC +D ++ F I C+E +E C L P I++C G QL A T++L PPH+YVPWV V+G T++ + + Sbjct: 73 VNVTLYYEALCGGCRAFLIRELFPTW--LLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDEL-DMELAFLTIVCMEE--FEDMERSLPLCLQLYAPGLSPDTIMECAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPLEDQTQLLTLV 236
BLAST of FC875275 vs. ExPASy Swiss-Prot
Match: YKJ2_CAEEL (GILT-like protein C02D5.2 OS=Caenorhabditis elegans GN=C02D5.2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.525e-13 Identity = 48/169 (28.40%), Postives = 84/169 (49.70%), Query Frame = 1 Query: 211 ASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANST---FDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSHWETCFDKLELDP---KPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDG 699 A T V + VKL +Y E+ CP ++ F L K ++ + L+ ++L++ P+G A+ CQHGP+EC +N + C ID + +++ P + C++ KYS E E P + + +C + G +L +T SL P ++PW+V++G Sbjct: 127 AGPTIKEPVENIVKLDVYMEAQCPDTSRFFRQQLKKAWDILGRLNRIELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFGFPHRYLPGVLCMQG-----KYSLDEAMKCVTENYPSEYERMRECASGTRGRRLLALSGQKTASLTPAIDFIPWIVING 290 The following BLAST results are available for this feature:
BLAST of FC875275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875275 ID=FC875275; Name=FC875275; organism=Citrus clementina; type=EST; length=739bpback to top |