FC875300
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875300 vs. ExPASy Swiss-Prot
Match: KCO1_ARATH (Calcium-activated outward-rectifying potassium channel 1 OS=Arabidopsis thaliana GN=KCO1 PE=1 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 1.839e-45 Identity = 102/195 (52.31%), Postives = 133/195 (68.21%), Query Frame = 2 Query: 98 MASNGANQPLL-SGFVDSTPQTNNKDA----PKRRRLRRCRSAPQTDVAALD---INEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGMFLSKAADYLVDKQEILLVKALHRYQKVGPTDILKEIETXQVRY 658 M+S+ A PLL + +D+ Q N ++ ++RRLRR RSAP+ D D I+E +F PN +RV+++LA YL G+L FY V QI G KT+ ++D++YFCIVTMTTVGYGDLVPNS S+LL+CAFVF+GM LVG LS+AADYLV+KQE LLV+A H Q GPTDILKE+ T ++RY Sbjct: 1 MSSDAARTPLLPTEKIDTMAQDFNLNSRTSSSRKRRLRRSRSAPRGDCMYNDDVKIDEPPPHPSKIPMFSDLNPNLRRVIMFLALYLTIGTLCFYLVRDQISGHKTSGVVDALYFCIVTMTTVGYGDLVPNSSASRLLACAFVFSGMVLVGHLLSRAADYLVEKQEALLVRAFHLRQSFGPTDILKELHTNKLRY 195
BLAST of FC875300 vs. ExPASy Swiss-Prot
Match: KCO6_ARATH (Probable calcium-activated outward-rectifying potassium channel 6 OS=Arabidopsis thaliana GN=KCO6 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.815e-16 Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 2 Query: 191 LRRCRSAPQTDVAA---LDINEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGMFLSKAADYLVDKQEILLVKALHR 598 L R ++AP V I +KD T S S+ ++ L YL G L ++ +T+ ++D +YFCIVTM T+GYGD+ PNSVV+KL S FV G G + + LS Y++D QE ++ + R Sbjct: 118 LHRSKTAPAMAVINDLHHPIRQKDPTETSRSVV-------RQAFALLVVYLSLGVLIYWLNRDHYVVNQTHPVVDGLYFCIVTMCTIGYGDITPNSVVTKLFSIMFVLVGFGFIDILLSGMVSYVLDLQESYMLDSAKR 249
BLAST of FC875300 vs. ExPASy Swiss-Prot
Match: KCO5_ARATH (Probable calcium-activated outward-rectifying potassium channel 5, chloroplastic OS=Arabidopsis thaliana GN=KCO5 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.285e-14 Identity = 52/180 (28.89%), Postives = 89/180 (49.44%), Query Frame = 2 Query: 143 DSTPQTNNKDAPKRRRLRRCRSAPQTDVAALDINEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVN-SQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGMFLSKAADYLVDKQEILLVKAL--------HRYQKVGPTDILKEIETXQVR 655 DS N+ + R L R R+AP V D+ K S K ++ + L YL G +S Y+ N G++T+ ++D++YFCIVTM T+GYGD+ P + +K+ + FV G G + + LS +Y++D QE +++ + H + + D + + E ++R Sbjct: 68 DSDSDETNRFLSQTRPLHRSRTAPAM-VIIKDLRTKPPETKKPSPVSKSI--IRQAIFLLIVYLTLG-VSIYSFNRDHYSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPWTKIFAVVFVLFGFGFLDILLSGVVNYVLDLQESMILTGIQTRQHHQHHHHHRFSAKDYIIDFEKGRMR 243
BLAST of FC875300 vs. ExPASy Swiss-Prot
Match: KCO2_ARATH (Probable calcium-activated outward-rectifying potassium channel 2 OS=Arabidopsis thaliana GN=KCO2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13 Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 2 Query: 305 RVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGMFLSKAADYLVDKQE 571 + + L YL G L ++ +T+ ++D++YFCIVTM T+GYGD+ P+SVV+KL S FV G G + + LS Y++D QE Sbjct: 148 QAVALLVVYLSLGVLIYWLNRDSYNVKQTHPVVDALYFCIVTMCTIGYGDITPDSVVTKLFSIFFVLVGFGFMDILLSGMVTYVLDLQE 236 The following BLAST results are available for this feature:
BLAST of FC875300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875300 ID=FC875300; Name=FC875300; organism=Citrus clementina; type=EST; length=713bpback to top |