FC875337

Overview
NameFC875337
Unique NameFC875337
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14114 contig Ccv1_Contig14114:20..709. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875337 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 276.174 bits (705), Expect = 1.525e-77
Identity = 139/167 (83.23%), Postives = 150/167 (89.82%), Query Frame = 2
Query:  125 PVLDKSEWVKGQAIR-QSTVSVRSLPSGPSSLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYHR 622
            PVLD  E++KGQ +R  S   VR  PSG SSLT+RA SYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLL++APGLGQY+SGAILFEETLYQSTTDGKKMVDVL+EQ IVPGIKVDKG +PL GSNDESWCQGLDGLA R+AAYY +
Sbjct:   11 PVLDNPEFLKGQTLRIPSVAGVRFTPSGSSSLTVRASSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQ 177          

HSP 2 Score: 35.039 bits (79), Expect = 1.525e-77
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 1
Query:  619 QGARFAKWRTVVSIP 663
            QGARFAKWRTVVSIP
Sbjct:  177 QGARFAKWRTVVSIP 191          
BLAST of FC875337 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 1.167e-74
Identity = 138/166 (83.13%), Postives = 149/166 (89.76%), Query Frame = 2
Query:  137 KSEWVKGQAI---RQSTVSVRSLPSGPSSLTIRAGS-YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYHR 622
            KS+WVKGQ++   + S+VS       PS+LT+RA S YADELVKTAKT+ASPG GI+AMDESNATCGKRLASIGLENTEANRQAYRTLLV+APGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPL GS DESWCQGLDGLASRTAAYY +
Sbjct:   15 KSDWVKGQSLLLRQPSSVSAIRSHVAPSALTVRAASAYADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQ 180          

HSP 2 Score: 35.039 bits (79), Expect = 1.167e-74
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 1
Query:  619 QGARFAKWRTVVSIP 663
            QGARFAKWRTVVSIP
Sbjct:  180 QGARFAKWRTVVSIP 194          
BLAST of FC875337 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.985e-74
Identity = 138/169 (81.66%), Postives = 153/169 (90.53%), Query Frame = 2
Query:  125 PVLDKSEWVKGQAI--RQSTVSVRSLPSGPSSLTIRAGS-YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYHR 622
            PVLDKSEWVKGQ++  RQ + +   L +  +SLT+RA S YADELVKTAKT+ASPGRGILAMDESNATCGKRL SIGLENTEANRQA+RTLLV+APGLGQY+SGAILFEETLYQSTT+GKKMVDVLVEQNIVPGIKVDKGLVPL GSN+ESW QGLDGL+SRTAAYY +
Sbjct:   11 PVLDKSEWVKGQSVLFRQPSSASVVLRNRATSLTVRAASSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPGLGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWGQGLDGLSSRTAAYYQQ 179          

HSP 2 Score: 35.039 bits (79), Expect = 1.985e-74
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 1
Query:  619 QGARFAKWRTVVSIP 663
            QGARFAKWRTVVSIP
Sbjct:  179 QGARFAKWRTVVSIP 193          
BLAST of FC875337 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 6.254e-70
Identity = 123/136 (90.44%), Postives = 132/136 (97.06%), Query Frame = 2
Query:  215 LTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYHR 622
            LTIRAGSYADELVKTAKT+ASPGRGILAMDESNATCGKRLASIGLENTE NRQA+RTLLVT P LG+YISGAILFEETLYQSTTDG+K+VDVL+EQNI+PGIKVDKGLVPLAGSNDESWCQGLDGLASR+AAYY +
Sbjct:    2 LTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQ 137          

HSP 2 Score: 35.039 bits (79), Expect = 6.254e-70
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 1
Query:  619 QGARFAKWRTVVSIP 663
            QGARFAKWRTVVSIP
Sbjct:  137 QGARFAKWRTVVSIP 151          
BLAST of FC875337 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 1.063e-69
Identity = 130/163 (79.75%), Postives = 139/163 (85.28%), Query Frame = 2
Query:  137 KSEW-VKGQAIRQSTVSVRSLPSGPSSLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYHR 622
            KSEW    QA     V+V        S+ +RAG+Y DELVKTAKT+ASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQST DGKK+VD+L EQ IVPGIKVDKGLVPLAGSN+ESWCQGLDGLASR AAYY +
Sbjct:   15 KSEWGATRQAAAPKPVTV--------SMVVRAGAYDDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQ 169          

HSP 2 Score: 35.039 bits (79), Expect = 1.063e-69
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 1
Query:  619 QGARFAKWRTVVSIP 663
            QGARFAKWRTVVSIP
Sbjct:  169 QGARFAKWRTVVSIP 183          
BLAST of FC875337 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 3.991e-66
Identity = 117/131 (89.31%), Postives = 126/131 (96.18%), Query Frame = 2
Query:  230 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYHR 622
            GSYADELVKTAKT+ASPGRGILAMDESNATCGKRL SIGLENTEANRQA+RTLLVT P LG+YISGAILFEETLYQST DG+K+VDVLVEQNI+PGIKVDKGLVPLAGSN+ESWCQGLDGLASR+AAYY +
Sbjct:    1 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVDGRKIVDVLVEQNIIPGIKVDKGLVPLAGSNNESWCQGLDGLASRSAAYYQQ 131          

HSP 2 Score: 35.039 bits (79), Expect = 3.991e-66
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 1
Query:  619 QGARFAKWRTVVSIP 663
            QGARFAKWRTVVSIP
Sbjct:  131 QGARFAKWRTVVSIP 145          
BLAST of FC875337 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.777e-63
Identity = 115/159 (72.33%), Postives = 131/159 (82.39%), Query Frame = 2
Query:  140 SEWVKGQAIRQSTVSVRSLPSGPSSLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYY 616
            S W+  ++   ++ S  S P    S  IRAG+Y+DELVKTAK++ASPGRGILA+DESNATCGKRLASIGL+NTE NRQAYR LL+T PGLG YISG+ILFEETLYQST DGK  VD L + NIVPGIKVDKGL PLAGSN+ESWCQGLDGLASR+A YY
Sbjct:   14 SPWIGQRSFAHTSAS--SSPPPRVSFAIRAGAYSDELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYY 170          

HSP 2 Score: 34.6538 bits (78), Expect = 8.777e-63
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1
Query:  619 QGARFAKWRTVVSIP 663
            QGARFAKWRTVVS+P
Sbjct:  172 QGARFAKWRTVVSVP 186          
BLAST of FC875337 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.090e-50
Identity = 100/129 (77.52%), Postives = 106/129 (82.17%), Query Frame = 2
Query:  230 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYY 616
            G Y +EL+KTA TVAS GRGILAMDESNATCGKRL SIG+ENTE NR+AYR LLVTAPGLGQYISGAILFEETLYQST  GKK VDV+ EQNIVPGIKVDKGLVP   +   SWC GLDG  S  A YY
Sbjct:   28 GKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVP-CPTPTMSWCMGLDGWTS-AAEYY 154          

HSP 2 Score: 31.5722 bits (70), Expect = 1.090e-50
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 1
Query:  622 GARFAKWRTVVSIP 663
            GARFAKWR+VVSIP
Sbjct:  157 GARFAKWRSVVSIP 170          
BLAST of FC875337 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 5.009e-41
Identity = 82/127 (64.57%), Postives = 97/127 (76.38%), Query Frame = 2
Query:  236 YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYY 616
            Y DEL+KTAK +A+PGRGILA DES  T GKR A I +ENTE+NRQAYR LL T+PG    +SG ILFEETLYQ T+DGK  VD+L+E  ++PGIKVDKGLV LAG+N E+  QGLD L +R   YY
Sbjct:    8 YEDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFTSPGSYPCLSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGARCQQYY 134          

HSP 2 Score: 23.0978 bits (48), Expect = 5.009e-41
Identity = 9/13 (69.23%), Postives = 9/13 (69.23%), Query Frame = 1
Query:  622 GARFAKWRTVVSI 660
            GARFAKWR    I
Sbjct:  137 GARFAKWRAFFKI 149          
BLAST of FC875337 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 8.503e-41
Identity = 79/129 (61.24%), Postives = 98/129 (75.97%), Query Frame = 2
Query:  230 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYY 616
            G YADEL+K AK +A+PG+GILA DES  T GKRLASI +EN EANRQA R LL T+P   QY+SG ILFEETLYQ +++GK  V++L E N++PGIKVDKG+V LAG++ E+  QG D L +R   YY
Sbjct:    6 GKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENIEANRQALRELLFTSPNALQYLSGVILFEETLYQKSSEGKPFVEILQENNVIPGIKVDKGVVELAGTDGETTTQGFDSLGARCQQYY 134          

HSP 2 Score: 25.7942 bits (55), Expect = 8.503e-41
Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  622 GARFAKWRTVVSI 660
            GARFAKWR V+ I
Sbjct:  137 GARFAKWRAVLKI 149          
The following BLAST results are available for this feature:
BLAST of FC875337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALFC_SPIOL1.525e-7783.23Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC1_ARATH1.167e-7483.13Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC2_ARATH1.985e-7481.66Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_PEA6.254e-7090.44Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC_ORYSJ1.063e-6979.75Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC2_PEA3.991e-6689.31Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC3_ARATH8.777e-6372.33Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_CHLRE1.090e-5077.52Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_ARATH5.009e-4164.57Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA8.503e-4161.24Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31402G11EF CTVClemen1 Citrus clementina cDNA clone C31402G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875337 ID=FC875337; Name=FC875337; organism=Citrus clementina; type=EST; length=688bp
AAAGATACTGAAGATAAGATTATAAGTGCTATAAGCTAAGGCCTCTCGAG
CTCAGAACCCACAGCAAGAAGAAGCAAAGAGGAAAATGGCCTCAGCCTCG
GCATCTTTACTCAAGTCATCATCCCCCGTTCTTGACAAGTCTGAGTGGGT
TAAGGGCCAGGCCATCCGCCAGTCTACTGTCTCAGTCCGCAGCCTCCCCA
GTGGCCCCTCTTCCCTCACCATCCGTGCTGGTTCCTATGCCGATGAGCTC
GTCAAGACCGCGAAAACTGTTGCATCACCAGGACGTGGAATTTTGGCCAT
GGATGAGTCAAATGCAACTTGTGGAAAACGCCTTGCCTCAATTGGGTTAG
AGAACACTGAGGCTAACCGCCAGGCATACCGTACCCTCCTTGTTACAGCC
CCTGGTCTTGGACAGTACATCTCTGGTGCCATCCTTTTTGAGGAGACTCT
CTACCAATCCACCACCGATGGCAAGAAGATGGTCGATGTTCTTGTTGAGC
AAAACATTGTCCCCGGTATCAAAGTCGACAAGGGTTTGGTGCCCCTTGCT
GGTTCCAATGATGAGTCATGGTGCCAGGGTCTTGATGGCCTGGCTTCTCG
CACTGCTGCTTACTACCACAGGGAGCTCGTTTCGCCAAATGGCGTACTGT
TGTGAGCATTCCCATGGCCCATCTGCCTTGGCAGTCAA
back to top