FC875341

Overview
NameFC875341
Unique NameFC875341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10212 contig Ccv1_Contig10212:1..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 2.539e-92
Identity = 108/116 (93.10%), Postives = 111/116 (95.69%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRFSD+SVQ DMKLWPFK+ AGPADKPMI V YKGEEK+FAAEEISSMVLIKMREIAEAYLG TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL
Sbjct:   74 KRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVEYKGEEKEFAAEEISSMVLIKMREIAEAYLGVTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 189          

HSP 2 Score: 147.902 bits (372), Expect = 2.539e-92
Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 1
Query:  109 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            M+GKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDA+
Sbjct:    1 MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAK 74          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.539e-92
Identity = 106/116 (91.38%), Postives = 108/116 (93.10%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRFSD SVQ D+KLWPFKVI GP DKPMI V YKGEEKQFAAEEISSMVL KM+EIAEAYLG TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL
Sbjct:   74 KRLIGRRFSDPSVQSDIKLWPFKVIPGPGDKPMIVVTYKGEEKQFAAEEISSMVLTKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 189          

HSP 2 Score: 152.525 bits (384), Expect = 2.539e-92
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 1
Query:  109 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNP NTVFDA+
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAK 74          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 5.637e-92
Identity = 105/116 (90.52%), Postives = 110/116 (94.83%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRFSDASVQ DMKLWPFKVI GP DKPMI VNYKGEEKQF+AEEISSMVLIKM+EIAEA+LG T+KNAVVTVPAY NDSQRQATKDAGVI+GLNVMRIINEPTAAAIAYGL
Sbjct:   74 KRLIGRRFSDASVQSDMKLWPFKVIPGPGDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAFLGTTVKNAVVTVPAYSNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGL 189          

HSP 2 Score: 150.984 bits (380), Expect = 5.637e-92
Identity = 71/74 (95.95%), Postives = 73/74 (98.65%), Query Frame = 1
Query:  109 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTD+ERLIGDAAKNQVAMNP NTVFDA+
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPINTVFDAK 74          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.251e-91
Identity = 104/116 (89.66%), Postives = 110/116 (94.83%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRFSDASVQ DMKLWPFKVI GP DKPMI V YKGEEK+FAAEEISSMVL KM+EIAEA+LG+T+KNAVVTVPAYFNDSQRQATKDAGVI+GLNVMRIINEPTAAAIAYGL
Sbjct:   74 KRLIGRRFSDASVQEDMKLWPFKVIPGPGDKPMIVVTYKGEEKEFAAEEISSMVLTKMKEIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGL 189          

HSP 2 Score: 151.369 bits (381), Expect = 1.251e-91
Identity = 71/74 (95.95%), Postives = 73/74 (98.65%), Query Frame = 1
Query:  109 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVA+NP NTVFDA+
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVALNPINTVFDAK 74          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.747e-90
Identity = 101/116 (87.07%), Postives = 111/116 (95.69%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF+D+SVQ D+KLWPF + +GPA+KPMI VNYKGE+K+F+AEEISSM+LIKMREIAEAYLG TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL
Sbjct:   74 KRLIGRRFTDSSVQSDIKLWPFTLKSGPAEKPMIVVNYKGEDKEFSAEEISSMILIKMREIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 189          

HSP 2 Score: 148.673 bits (374), Expect = 6.747e-90
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 1
Query:  109 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDA+
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAK 74          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.148e-89
Identity = 102/116 (87.93%), Postives = 109/116 (93.97%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRFSDASVQ D +LWPF +I+G A+KPMI V YKGEEKQFAAEEISSMVLIKMREIAEA+LG T+KNAVVTVPAYFNDSQRQATKDAGVIAGLNV+RIINEPTAAAIAYGL
Sbjct:   74 KRLIGRRFSDASVQSDRQLWPFTIISGTAEKPMIVVEYKGEEKQFAAEEISSMVLIKMREIAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 189          

HSP 2 Score: 149.058 bits (375), Expect = 1.148e-89
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 1
Query:  109 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDA+
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAK 74          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 206.838 bits (525), Expect = 1.954e-89
Identity = 104/116 (89.66%), Postives = 111/116 (95.69%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRFSDASVQ DMK  PFKV++GP +KPMIGVNYKGEEKQFAAEEISSMVL KM+EIAEAYLG+T+KNAVVTVPAYFNDSQRQATKDAGVI+GLNVMRIINEPTAAAIAYGL
Sbjct:   74 KRLIGRRFSDASVQADMKHRPFKVVSGPGEKPMIGVNYKGEEKQFAAEEISSMVLTKMKEIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGL 189          

HSP 2 Score: 144.05 bits (362), Expect = 1.954e-89
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 1
Query:  109 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            MAGKGEGPAIGIDLGTTYS VGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDA+
Sbjct:    1 MAGKGEGPAIGIDLGTTYSRVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAK 74          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 2.143e-85
Identity = 100/116 (86.21%), Postives = 105/116 (90.52%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRFS  +VQ  MKLWP + + G  DKPMI  NYKGEEKQFAAEEISSMVLIKM+EIAEAYLG+TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL
Sbjct:   73 KRLIGRRFSSPAVQSSMKLWPSRHL-GLGDKPMIVFNYKGEEKQFAAEEISSMVLIKMKEIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 187          

HSP 2 Score: 146.747 bits (369), Expect = 2.143e-85
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 1
Query:  118 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDA+
Sbjct:    3 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.505e-83
Identity = 98/116 (84.48%), Postives = 107/116 (92.24%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRFSD+SVQ DMKLWPFKV   P DKPMI VNYKGEEK+F+AEEISSMVL+KMRE+AEA+LG  +KNAVVTVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct:   73 KRLIGRRFSDSSVQNDMKLWPFKVGGSPCDKPMIVVNYKGEEKKFSAEEISSMVLVKMREVAEAFLGHAVKNAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGL 188          

HSP 2 Score: 132.494 bits (332), Expect = 1.505e-83
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 1
Query:  124 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            EG AIGIDLGTTYSCVGVWQ+DRVEII NDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDA+
Sbjct:    5 EGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 3.649e-76
Identity = 89/116 (76.72%), Postives = 96/116 (82.76%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+FSD  VQ DMK WPFKVI    DKP I V +KGE K F+ EEISSMVL+KM+E AEAYLG TI NAV+TVPAYFNDSQRQATKDAG I+ LNV RIINEPTAAAIAYGL
Sbjct:   68 KRLIGRKFSDKEVQSDMKHWPFKVIPKDGDKPHIQVEFKGETKVFSPEEISSMVLLKMKETAEAYLGKTINNAVITVPAYFNDSQRQATKDAGTISKLNVQRIINEPTAAAIAYGL 183          

HSP 2 Score: 131.724 bits (330), Expect = 3.649e-76
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            +IGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDA+
Sbjct:    3 SIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAK 68          
The following BLAST results are available for this feature:
BLAST of FC875341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_ARATH2.539e-9293.10Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP7C_PETHY2.539e-9291.38Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP72_SOLLC5.637e-9290.52Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP71_SOLLC1.251e-9189.66Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP73_ARATH6.747e-9087.07Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP72_ARATH1.148e-8987.93Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP7E_SPIOL1.954e-8989.66Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP70_MAIZE2.143e-8586.21Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_SOYBN1.505e-8384.48Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HS7C1_DICDI3.649e-7676.72Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]

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Properties
Property NameValue
Genbank descriptionC31402H03EF CTVClemen1 Citrus clementina cDNA clone C31402H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875341 ID=FC875341; Name=FC875341; organism=Citrus clementina; type=EST; length=674bp
GAGAACCCATACAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTT
TTTCTTCGCTGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAG
TTTTGATAATGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTG
GGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGAT
TATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCA
CCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCCATG
AACCCCACGAACACCGTCTTTGATGCAAGAGGTTGATTGGTAGGAGATTC
AGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGAT
TGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAG
AGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATG
CGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGT
TACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATG
CCGGTGTCATTGCTGGGCTTAATGTGATGCGTATCATCAACGAGCCCACT
GCTGCTGCCATTGCTTATGGCCTT
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