FC875353
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875353 vs. ExPASy Swiss-Prot
Match: YOU1_CAEEL (Putative transporter ZK637.1 OS=Caenorhabditis elegans GN=ZK637.1 PE=3 SV=5) HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19 Identity = 67/230 (29.13%), Postives = 109/230 (47.39%), Query Frame = 3 Query: 3 RALEKI---AQVNKTKLPDGKLVAHRSTLPTGERAPPELVHLLSSNGGNKTTEXXXXXXXXXXXXXXXXARTTIXXXXXXFGNSFAYYAVVLLISELSSLDTRCRSPLMFSH-------HPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 662 RALE + A++N+ +LP G+LV S+ G + ++ +LLS + +TTI +F+YY +VL + L C L FS+ P + Y D T+LAE PGL++ ++++ GRK ++ + + + +F L T L+F AR + GAF + +Y E+YPT++R+ G G +AM RIG +V P Sbjct: 272 RALETLQAAARMNRVQLPTGRLV---SSTKAGSESRGDIANLLSPD----------------------LRKTTILLWCIWAITAFSYYGMVLFTTVLFQSHDECHGGL-FSNGTQMEVCQPLTRSDYFDLLSTTLAEFPGLIITVLIIEWFGRKKTMALEYAVFAIFTFLLYFCLDRFTVTVLIFVARAFISGAFQCAYVYTPEVYPTTLRAVGLGTCSAMARIGAIVTP 475
BLAST of FC875353 vs. ExPASy Swiss-Prot
Match: SVOP_RAT (Synaptic vesicle 2-related protein OS=Rattus norvegicus GN=Svop PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16 Identity = 52/162 (32.10%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 207 TTIXXXXXXFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANL---------YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTL-SCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 662 TT+ F N+F+YY +VLL +EL C +L Y+D T+L+E PG+L+ ++D GRK ++ + F + S LL + N+LT LLF AR + G F + +Y E+YPT+ R+ G G + M R+G ++ P Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFVIFSLCSLLLFICIGRNVLTL-LLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITP 476
BLAST of FC875353 vs. ExPASy Swiss-Prot
Match: SVOP_PONAB (Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16 Identity = 51/166 (30.72%), Postives = 84/166 (50.60%), Query Frame = 3 Query: 207 TTIXXXXXXFGNSFAYYAVVLLISEL-------------SSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTL-SCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 662 TT+ F N+F+YY +VLL +EL +++ +C + Y+D T+L+E PG+L+ ++D GRK ++ + F + S LL + N+LT LLF AR + G F + +Y E+YPT+ R+ G G + M R+G ++ P Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEED----YMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTL-LLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITP 476
BLAST of FC875353 vs. ExPASy Swiss-Prot
Match: SVOP_HUMAN (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16 Identity = 51/166 (30.72%), Postives = 84/166 (50.60%), Query Frame = 3 Query: 207 TTIXXXXXXFGNSFAYYAVVLLISEL-------------SSLDTRCRSPLMFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTL-SCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 662 TT+ F N+F+YY +VLL +EL +++ +C + Y+D T+L+E PG+L+ ++D GRK ++ + F + S LL + N+LT LLF AR + G F + +Y E+YPT+ R+ G G + M R+G ++ P Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEED----YMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTL-LLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITP 476
BLAST of FC875353 vs. ExPASy Swiss-Prot
Match: SVOP_MOUSE (Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16 Identity = 52/162 (32.10%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 207 TTIXXXXXXFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANL---------YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTL-SCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 662 TT+ F N+F+YY +VLL +EL C +L Y+D T+L+E PG+L+ ++D GRK ++ + F + S LL + N+LT LLF AR + G F + +Y E+YPT+ R+ G G + M R+G ++ P Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFIIFSLCSLLLFICIGRNVLTL-LLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITP 476
BLAST of FC875353 vs. ExPASy Swiss-Prot
Match: SVOP_XENLA (Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16 Identity = 53/162 (32.72%), Postives = 79/162 (48.77%), Query Frame = 3 Query: 207 TTIXXXXXXFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANL---------YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTL-SCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 662 TT+ F N+F+YY +VLL +EL C +L Y D T+L+E PGLL+ ++D GRK ++ I F + S LL + N+LT LF AR + G F + +Y E+YPT+ R+ G G + M R+G ++ P Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISNQRKAVKPKCSLACEYLTVEDYTDLLWTTLSEFPGLLVTLWIIDRVGRKKTMAICFIIFSFSALLLFLCVGRNVLTV-FLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITP 476
BLAST of FC875353 vs. ExPASy Swiss-Prot
Match: SVOP_BOVIN (Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16 Identity = 52/162 (32.10%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 207 TTIXXXXXXFGNSFAYYAVVLLISELSSLDTRCRSPLMFSHHPQDANL---------YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTL-SCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 662 TT+ F N+F+YY +VLL +EL C +L Y+D T+L+E PG+L+ ++D GRK ++ + F + S LL + N+LT LLF AR + G F + +Y E+YPT+ R+ G G + M R+G ++ P Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVVFSFCSLLLFICVGRNMLTL-LLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITP 476
BLAST of FC875353 vs. ExPASy Swiss-Prot
Match: SVOPL_DANRE (Putative transporter SVOPL OS=Danio rerio GN=svopl PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.364e-15 Identity = 68/212 (32.08%), Postives = 91/212 (42.92%), Query Frame = 3 Query: 66 HRSTLPTGERAPPELVHLLSSNGGNKTTEXXXXXXXXXXXXXXXXARTTIXXXXXXFGNSFAYYAVVLLISELSSLDTRCRSPLMFSH---HPQDANL----------YIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 662 + LP GE PE+ + GN T RT++ F SF+YY VL SEL + C + H H Q+ L Y I+ L E+ + L IL++ GRK S+ I+ LS F + + + + T LLF R V F V IY AE+YPTSVRS G G + RIGGM+ P Sbjct: 266 NNGVLPEGELREPEV-----TERGNAVT-----------LISSAFRRTSLLLWYSWFVASFSYYGSVLSSSELLEKNLLCVTDPDLEHQIKHIQEETLCYCIPFNSDDYQTLLISCLGEVALIPLNIILLNIVGRKYSMVILLLLSAFFFMLVNICTTMLGFTILLFLLRSVVSMNFNVVYIYTAEVYPTSVRSIGMGFCTSFSRIGGMIAP 461
BLAST of FC875353 vs. ExPASy Swiss-Prot
Match: SVOPL_HUMAN (Putative transporter SVOPL OS=Homo sapiens GN=SVOPL PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14 Identity = 71/239 (29.71%), Postives = 104/239 (43.51%), Query Frame = 3 Query: 9 LEKIAQVNKTKLPDGKLVAHRSTLPTGERAPPELVHLLSSNGGNKTTEXXXXXXXXXXXXXXXXARTTIXXXXXXFGNSFAYYAVVLLISELSSLDTRC------------------RSPL---MFSHHPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 662 LE++A++N++ +P+GKLV P E+ LL + RTT+ G SFAYY V+L +EL D C +SP MF+ P D Y I+++ EI L + ++ GR+LS++I + LF L L S+ G LF R V F IY AE+YPT++R+ G G + ++ RIG MV P Sbjct: 242 LERVAKMNRSVMPEGKLVE-----PVLEKRG-RFADLLDAK----------------------YLRTTLQIWVIWLGISFAYYGVILASAELLERDLVCGSKSDSAVVVTGGDSGESQSPCYCHMFA--PSD---YRTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAP 447
BLAST of FC875353 vs. ExPASy Swiss-Prot
Match: SVOPL_MOUSE (Putative transporter SVOPL OS=Mus musculus GN=Svopl PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 71/239 (29.71%), Postives = 99/239 (41.42%), Query Frame = 3 Query: 9 LEKIAQVNKTKLPDGKLVAHRSTLPTGERAPPELVHLLSSNGGNKTTEXXXXXXXXXXXXXXXXARTTIXXXXXXFGNSFAYYAVVLLISELSSLDTRCRSPL-------------------MFSH--HPQDANLYIDEFITSLAEIPGLLLAAILVDTAGRKLSITIMFTLSCLFLLPLVTYQSNILTTGLLFGARMCVMGAFTVSLIYAAEIYPTSVRSTGAGAANAMGRIGGMVCP 662 LE IA++N++ +P+G+LV P E+ LL S RTT+ G SFAYY V+L +EL D C S + H P D Y I++L EI L + ++ GR+LS++I + LF L L S+ G LF R V F IY AE+YPT +R+ G G + ++ RIG MV P Sbjct: 242 LESIAKMNRSVMPEGQLVE-----PILEKRG-RFADLLDSK----------------------YLRTTLQIWIIWLGISFAYYGVILASAELLERDLVCGSKSESEPEVVETTGDSGEGLSPCYCHIFAPSD---YRTMIISTLGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTIYIYTAEVYPTPMRAIGMGTSGSLCRIGAMVAP 449 The following BLAST results are available for this feature:
BLAST of FC875353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875353 ID=FC875353; Name=FC875353; organism=Citrus clementina; type=EST; length=704bpback to top |