FC875380

Overview
NameFC875380
Unique NameFC875380
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length664
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15219 contig Ccv1_Contig15219:114..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: AVP1_ARATH (Pyrophosphate-energized vacuolar membrane proton pump 1 OS=Arabidopsis thaliana GN=AVP1 PE=1 SV=1)

HSP 1 Score: 409.068 bits (1050), Expect = 1.065e-113
Identity = 210/221 (95.02%), Postives = 214/221 (96.83%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPF 663
            NTTAAIGKGFAIGSAALVSLALFGAFVSRA I TVDVLTPKV IGL+VGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTI GLMEGTAKPDYATCVKISTDASIKEMIPPG LVMLTPLIVG FFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAG SEHA++LGPKGS+PHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPF
Sbjct:  538 NTTAAIGKGFAIGSAALVSLALFGAFVSRAGIHTVDVLTPKVIIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGCLVMLTPLIVGFFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGVSEHAKSLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPF 758          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: AVP_PHAAU (Pyrophosphate-energized vacuolar membrane proton pump OS=Phaseolus aureus PE=1 SV=3)

HSP 1 Score: 407.142 bits (1045), Expect = 4.047e-113
Identity = 213/221 (96.38%), Postives = 217/221 (98.19%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPF 663
            NTTAAIGKGFAIGSAALVSLALFGAFVSRA+I+TVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTI GLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPL+VGI FGVETLSGVLAGSLVSGVQIAISASNT GAWDNAKKYIEAGASEHAR+LGPKGSD HKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPF
Sbjct:  534 NTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNT-GAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPF 753          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: AVP_HORVU (Pyrophosphate-energized vacuolar membrane proton pump OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 404.445 bits (1038), Expect = 2.623e-112
Identity = 209/221 (94.57%), Postives = 213/221 (96.38%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPF 663
            NTTAAIGKGFAIGSAALVSLALFGAFVSRA +  VDVL+PKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTI GLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVG  FGVETLSGVLAG+LVSGVQIAISASNTGGAWDNAKKYIEAG SEHAR+LGPKGSD HKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPF
Sbjct:  530 NTTAAIGKGFAIGSAALVSLALFGAFVSRAGVKVVDVLSPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTLFGVETLSGVLAGALVSGVQIAISASNTGGAWDNAKKYIEAGNSEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPF 750          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_LEPIN (Pyrophosphate-energized proton pump OS=Leptospira interrogans GN=hppA PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 8.518e-79
Identity = 150/221 (67.87%), Postives = 180/221 (81.45%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPF 663
            NTTAAIGKGFAIGSAAL SLALF AF++R   ++++VL  +VF GL+ GAMLP+ F+AMTMKSVG AA+ MVEEVR+QF  I G+MEG  KPDY  CV IST A+++EMI PG LV+LTP++VG  FGV+TL+GVLAG+LV+GV +AISA+N+GG WDNAKKYIE  A       G KGSD HKAAV+GDT+GDP KDTSGPS+NILIKLMA+ SLVFA F
Sbjct:  478 NTTAAIGKGFAIGSAALTSLALFAAFITRTHTTSLEVLNAEVFGGLMFGAMLPFLFTAMTMKSVGKAAVDMVEEVRKQFKEIPGIMEGKNKPDYKRCVDISTSAALREMILPGLLVLLTPILVGYLFGVKTLAGVLAGALVAGVVLAISAANSGGGWDNAKKYIEKKA-------GGKGSDQHKAAVVGDTVGDPFKDTSGPSINILIKLMAITSLVFAEF 691          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_LEPIC (Pyrophosphate-energized proton pump OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=hppA PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 8.518e-79
Identity = 150/221 (67.87%), Postives = 180/221 (81.45%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPF 663
            NTTAAIGKGFAIGSAAL SLALF AF++R   ++++VL  +VF GL+ GAMLP+ F+AMTMKSVG AA+ MVEEVR+QF  I G+MEG  KPDY  CV IST A+++EMI PG LV+LTP++VG  FGV+TL+GVLAG+LV+GV +AISA+N+GG WDNAKKYIE  A       G KGSD HKAAV+GDT+GDP KDTSGPS+NILIKLMA+ SLVFA F
Sbjct:  478 NTTAAIGKGFAIGSAALTSLALFAAFITRTHTTSLEVLNAEVFGGLMFGAMLPFLFTAMTMKSVGKAAVDMVEEVRKQFKEIPGIMEGKNKPDYKRCVDISTSAALREMILPGLLVLLTPILVGYLFGVKTLAGVLAGALVAGVVLAISAANSGGGWDNAKKYIEKKA-------GGKGSDQHKAAVVGDTVGDPFKDTSGPSINILIKLMAITSLVFAEF 691          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_CLOTE (Pyrophosphate-energized proton pump OS=Clostridium tetani GN=hppA PE=3 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.032e-72
Identity = 135/220 (61.36%), Postives = 166/220 (75.45%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 660
            NTTAAIGKGFAIGSAAL +L+LF ++     + ++D+L     +GL +GAMLP+ F A+TM+SVG AA +M+EEVRRQF TI G+MEG A PDY  CV IST A+I+EMI PG L ++ P+ +G+  G E L G+LAG+LVSGV + I  SN GGAWDNAKKYIE GA       G KGS+ HKAAV+GDT+GDP KDTSGPS+NILIKLM + SLVFAP
Sbjct:  446 NTTAAIGKGFAIGSAALTALSLFASYAQATELESIDILNTVTLVGLFIGAMLPFLFGALTMESVGKAANEMIEEVRRQFKTIPGIMEGKATPDYKKCVDISTAAAIREMILPGVLAIVVPVAMGLLLGKEALGGLLAGALVSGVLVGILMSNAGGAWDNAKKYIEGGAH------GGKGSEAHKAAVVGDTVGDPFKDTSGPSMNILIKLMTIVSLVFAP 659          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA1_METAC (Pyrophosphate-energized proton pump 1 OS=Methanosarcina acetivorans GN=hppA1 PE=3 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 2.654e-72
Identity = 135/220 (61.36%), Postives = 168/220 (76.36%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 660
            NTTAAIGKGFAIGSAAL +LALF ++     +S +DV+ P VFIGL +GAMLPY FS+MT+ +VG+AA ++V EVRRQF  I+GLMEG A PDY  C+ IST +++KEMIPPG L ++ PL+VG+  G   L G+LAGS+ SG  IAI+ SN GGAWDNAKKYIE G        G KGSD HKA V GDT+GDP KDT+GP++NILIKLM++ ++VFAP
Sbjct:  460 NTTAAIGKGFAIGSAALTALALFASYGIAVGLSAIDVMNPNVFIGLTIGAMLPYLFSSMTILAVGNAAGEVVVEVRRQFREIAGLMEGKADPDYGKCIAISTHSALKEMIPPGLLAVIAPLLVGLVLGPGALGGLLAGSVASGFMIAITMSNAGGAWDNAKKYIELG------NFGGKGSDAHKAGVTGDTVGDPFKDTAGPAINILIKLMSIVAVVFAP 673          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA1_METMA (Pyrophosphate-energized proton pump 1 OS=Methanosarcina mazei GN=hppA1 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.317e-71
Identity = 130/220 (59.09%), Postives = 171/220 (77.73%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 660
            NTTAA+GKGFAIGSAAL +L+LF ++     ++++DV+ P VFIGLI+GAMLP+ FS+MT+ +VG+AA ++V EVRRQF  I GLMEG A PDY+ C+ IST +++KEMIPPG L ++ P++VG+  G   L G+LAGS+VSG  +AI+ SN GG+WDNAKK+IE G        G KGSD HKA V GDT+GDP KDT+GP++NILIKLM++ +LVFAP
Sbjct:  460 NTTAAMGKGFAIGSAALTALSLFASYAIAVGLTSIDVMNPNVFIGLIIGAMLPFLFSSMTILAVGNAAGEVVVEVRRQFKEIKGLMEGKADPDYSKCITISTHSALKEMIPPGILAVIAPILVGLVLGAGALGGLLAGSVVSGFMLAITMSNAGGSWDNAKKFIELG------NFGGKGSDAHKAGVTGDTVGDPFKDTAGPAINILIKLMSIVALVFAP 673          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_FUSNN (Pyrophosphate-energized proton pump OS=Fusobacterium nucleatum subsp. nucleatum GN=hppA PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.320e-63
Identity = 127/225 (56.44%), Postives = 162/225 (72.00%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAIST-----VDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 660
            N+TAA+GKGFAIGSAAL +L+LF A+       T     +DV  P+V  GL +G ML + FSA+TM +VG AA++MVEEVRRQF    G+M+ T KPDY  CV+IST +S+K+MI PG L ++ P+I+G+ + V+ L G+LAG+LV+GV +AI  +N GGAWDN KK IE G          KGSD HKAAV+GDT+GDP KDTSGPSLNILIKLM++ SLV  P
Sbjct:  447 NSTAAVGKGFAIGSAALTALSLFAAYKEAVDKLTSEALVIDVTDPEVIAGLFIGGMLTFLFSALTMTAVGKAAIEMVEEVRRQFREFPGIMDRTQKPDYKRCVEISTHSSLKQMILPGVLAIIVPVIIGL-WSVKALGGLLAGALVTGVLMAIMMANAGGAWDNGKKQIEGGYKG-----DKKGSDRHKAAVVGDTVGDPFKDTSGPSLNILIKLMSIVSLVLVP 665          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA2_METAC (Pyrophosphate-energized proton pump 2 OS=Methanosarcina acetivorans GN=hppA2 PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.017e-57
Identity = 113/221 (51.13%), Postives = 157/221 (71.04%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAIS--TVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFA 657
            NTT A+ KG+AIGSAAL +LALF  + S+  +   ++++  P V  GL++GA+LP+ FSA+TM +VG AA ++V EVRRQF  I G+MEGTAKP+Y  CV I T A++ EM  PG L +L PL+VG+  G + L+G+L G +V G  +A+   N GGAWDNAKK IE G        G +GS+ HKAAV+GDT+GDP KDT+GP+LN LIK++ + +++F+
Sbjct:  448 NTTKAVTKGYAIGSAALGALALFADYRSKVNLGGQSLNLDDPVVLAGLLLGALLPFVFSAVTMSAVGKAAFEVVNEVRRQFREIPGIMEGTAKPEYGRCVDIVTKAALHEMAMPGFLAVLVPLLVGLILGPKALAGLLIGLIVVGFMLALMMDNGGGAWDNAKKLIEDG------NHGGRGSEAHKAAVVGDTVGDPFKDTAGPALNALIKVVNMVAILFS 662          
The following BLAST results are available for this feature:
BLAST of FC875380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
AVP1_ARATH1.065e-11395.02Pyrophosphate-energized vacuolar membrane proton p... [more]
AVP_PHAAU4.047e-11396.38Pyrophosphate-energized vacuolar membrane proton p... [more]
AVP_HORVU2.623e-11294.57Pyrophosphate-energized vacuolar membrane proton p... [more]
HPPA_LEPIN8.518e-7967.87Pyrophosphate-energized proton pump OS=Leptospira ... [more]
HPPA_LEPIC8.518e-7967.87Pyrophosphate-energized proton pump OS=Leptospira ... [more]
HPPA_CLOTE2.032e-7261.36Pyrophosphate-energized proton pump OS=Clostridium... [more]
HPPA1_METAC2.654e-7261.36Pyrophosphate-energized proton pump 1 OS=Methanosa... [more]
HPPA1_METMA1.317e-7159.09Pyrophosphate-energized proton pump 1 OS=Methanosa... [more]
HPPA_FUSNN1.320e-6356.44Pyrophosphate-energized proton pump OS=Fusobacteri... [more]
HPPA2_METAC7.017e-5751.13Pyrophosphate-energized proton pump 2 OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionC31403C09EF CTVClemen1 Citrus clementina cDNA clone C31403C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875380 ID=FC875380; Name=FC875380; organism=Citrus clementina; type=EST; length=664bp
AACACCACTGCAGCTATCGGAAAGGGTTTCGCCATTGGTTCTGCAGCTCT
TGTGTCGCTAGCCCTCTTTGGTGCCTTTGTGAGCCGTGCAGCTATTTCAA
CTGTTGATGTGTTGACTCCAAAAGTGTTTATTGGTTTGATTGTTGGTGCT
ATGCTTCCTTACTGGTTCTCTGCCATGACAATGAAGAGTGTGGGAAGTGC
AGCTCTTAAAATGGTTGAGGAAGTGCGCAGGCAATTTAACACCATCTCTG
GTCTTATGGAAGGCACTGCCAAACCTGATTATGCTACCTGTGTTAAGATC
TCCACCGATGCATCCATCAAAGAGATGATCCCACCTGGTGCCCTTGTCAT
GCTTACACCCCTTATTGTTGGTATCTTTTTTGGTGTGGAAACTCTCTCTG
GGGTCCTTGCCGGTTCCCTTGTCTCAGGTGTACAGATTGCTATCTCTGCA
TCCAACACTGGTGGTGCCTGGGATAACGCCAAGAAGTACATTGAGGCTGG
CGCTTCAGAGCACGCCAGAACTCTTGGTCCAAAAGGATCAGATCCACACA
AGGCTGCGGTCATTGGTGACACAATTGGGGATCCATTGAAGGACACATCT
GGACCATCACTTAACATCCTAATCAAGCTAATGGCAGTGGAATCACTTGT
TTTTGCTCCCTTTT
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