FC875382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 9.430e-50 Identity = 94/167 (56.29%), Postives = 113/167 (67.66%), Query Frame = 2 Query: 170 GELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYP-RRGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 G+L IISR F+D+L +RND CPARGFYTYDAFI AAK+FP FG +G+ R +EIAAFF QT HETTGGW AP G Y+WGYCF E +P S YC + +P GK YYGRGP+QL+WNYNY +C + DPV++FK+AIWFWMT Q P Sbjct: 69 GDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQC--GRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSP 233 HSP 2 Score: 24.6386 bits (52), Expect = 9.430e-50 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH VI +W Sbjct: 234 KPSCHAVIVGQW 245
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.608e-49 Identity = 93/163 (57.06%), Postives = 112/163 (68.71%), Query Frame = 2 Query: 182 KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYP-RRGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 KIISR MF+ +L +RN+ CPA+GFYTYDAF+ AAK+FP+FG +G+ +R RE+AAF QT HETTGGW AP G YAWGYCF+ E +P S YC + YP GK YYGRGP+QL+WNYNY C ATD VLSFK+A+WFWMT Q P Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPC--GEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAP 164 HSP 2 Score: 27.335 bits (59), Expect = 1.608e-49 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 652 ATKPSCHEVITDEW 693 A KPSCH+V+T W Sbjct: 163 APKPSCHDVLTGRW 176
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.150e-49 Identity = 106/217 (48.85%), Postives = 130/217 (59.91%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNL--NYP--RRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH--------------ATKSLPTNGTISN 706 CG G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AAKA+P+FGN+G+ R REIAAF QT HETTGGW AP G YAWGYCF+ E + PS YC+ +P +YYGRGPIQ++WNYNY +C ATD V+SFKSA+WFWMTAQ PS H A + LP GT++N Sbjct: 58 CGPG--CQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERN-PSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQC--GRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTN 269
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 192.2 bits (487), Expect = 2.720e-49 Identity = 91/167 (54.49%), Postives = 111/167 (66.47%), Query Frame = 2 Query: 170 GELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPRRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 G+L IIS F+D+L +RND CPARGFYTY+AFI AAK+FP FG +G+ R +E+AAFF QT HETTGGW AP G Y+WGYCF E +P S YC + +P +YYGRGP+QL+WNYNY C A D V++FK+AIWFWMTAQPP Sbjct: 84 GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLC--GRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPP 248 HSP 2 Score: 24.6386 bits (52), Expect = 2.720e-49 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH VI +W Sbjct: 249 KPSCHAVIAGQW 260
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.723e-49 Identity = 94/186 (50.54%), Postives = 117/186 (62.90%), Query Frame = 2 Query: 116 CGSGV-VCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPRRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 CG+ CG + G++G++I+R MF D+L +RN+ CP +GFYTYDAFI AAKAFP FG +G+ T R REIAAF AQT HETTGGW AP G YAWGYC++ E P YC + +P KYYGRGPIQ+++NYNY + ATD V+SFK+A WFWMT Q P Sbjct: 44 CGNTADYCGSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQA--GKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSP 227 HSP 2 Score: 25.409 bits (54), Expect = 2.723e-49 Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH VIT W Sbjct: 228 KPSCHNVITGGW 239
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.256e-49 Identity = 107/222 (48.20%), Postives = 131/222 (59.01%), Query Frame = 2 Query: 116 CGS-----GVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNL--NYP--RRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH--------------ATKSLPTNGTISN 706 CGS G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AAKA+P+FGN+G+ R REIAAF QT HETTGGW AP G YAWGYCF+ E + PS YC+ +P +YYGRGPIQ++WNYNY +C ATD V+SFKSA+WFWMTAQ PS H A + LP GT++N Sbjct: 50 CGSTTDYCGKDCQSQCGGPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERN-PSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQC--GRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTN 268
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.334e-48 Identity = 99/188 (52.66%), Postives = 118/188 (62.77%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTD--GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN-----YPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 CG G C + G T GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FP FG SG+ T R REIAAFFAQT HETTGGW AP G YAWGYC++ E P YC + P R KY+GRGPIQ++ NYNY C ATDPV+SFKSA+WFWMT Q P Sbjct: 54 CGPGN-CQSQCPGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGR-KYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSP 237 HSP 2 Score: 24.6386 bits (52), Expect = 1.334e-48 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH+VI W Sbjct: 238 KPSCHDVIIGRW 249
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 2.266e-48 Identity = 93/169 (55.03%), Postives = 111/169 (65.68%), Query Frame = 2 Query: 167 GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN-----YPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FP FG SG+ T R REIAAFFAQT HETTGGW AP G YAWGYC++ E P YC + P R KY+GRGPIQ++ NYNY C ATDPV+SFKSA+WFWMT Q P Sbjct: 77 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGR-KYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSP 242 HSP 2 Score: 24.6386 bits (52), Expect = 2.266e-48 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH+VI W Sbjct: 243 KPSCHDVIIGRW 254
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 5.296e-48 Identity = 100/193 (51.81%), Postives = 115/193 (59.59%), Query Frame = 2 Query: 137 GERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC----NLNYPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPSHHATKSLPTNGTIS 703 G D G D G L II + F+ LL +RND RCPA GFYTY+AFI AAK FP FGN+G++ MR REIAAF QT HETTGGW DAP G YAWGYC++ EI+ PYC N +Y GRGPIQL+WNYNY C TDPV+SFK+AIWFWM Q P + N T S Sbjct: 76 GGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLC--GDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPS 265
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 8.527e-48 Identity = 98/181 (54.14%), Postives = 119/181 (65.75%), Query Frame = 2 Query: 134 CGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTG--GWRDAPGGEYAWGYCFISEISPPSPYC--NLNYP-RRGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 C + +G G D G L +I+RE F+ +L +RND CPARGFYTYDAFI AAK+FPAF +G++ R RE+AAF AQT HETTG GW AP G Y WGYC+ E++ P+ YC + NYP GK Y+GRGP+QLTWNYNY +C ATDP +SFKSA WFWMT Q P Sbjct: 58 CQSQCSGSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELN-PADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQC--GRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSP 234 HSP 2 Score: 24.6386 bits (52), Expect = 8.527e-48 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 1 Query: 658 KPSCHEVITDEWN 696 KPSCH+VI W+ Sbjct: 235 KPSCHDVIIGAWS 247 The following BLAST results are available for this feature:
BLAST of FC875382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875382 ID=FC875382; Name=FC875382; organism=Citrus clementina; type=EST; length=722bpback to top |