FC875506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5) HSP 1 Score: 366.696 bits (940), Expect = 6.931e-101 Identity = 176/221 (79.64%), Postives = 193/221 (87.33%), Query Frame = 2 Query: 53 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 715 MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+VEKPGSKLHKKETCEAVTIIET YVKTPRGLRSLNTVWAQHLSEEVRRRFYKNW QY++++GKK IQAQLEK+KKYA+V+RVLAHTQIRKMKGLKQKKAH+MEIQ+NGGTIA+KVD+AY FFEKQIP++AVFQKDEMIDII Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDII 221
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2) HSP 1 Score: 365.54 bits (937), Expect = 1.544e-100 Identity = 176/221 (79.64%), Postives = 192/221 (86.88%), Query Frame = 2 Query: 53 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 715 MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FPKDD SKPC LT+F+GYKAGMTHIVR+VEKPGSKLHKKETCEAVTIIET YVKTPRGLRSLN+VWAQHLSEEVRRRFYKNWC +Y++D GKK IQ QLEK+KKYAS+VRV+AHTQIRKMKGLKQKKAHLMEIQ+NGGTIA+KVDY Y FFEK+IPVDAVFQKDEMIDII Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDII 221
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4) HSP 1 Score: 361.303 bits (926), Expect = 2.912e-99 Identity = 176/221 (79.64%), Postives = 190/221 (85.97%), Query Frame = 2 Query: 53 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 715 MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KPCRLT+FLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIET YVKTPRGLRSL TVWAQHLSEE+RRRFYKNW ++ET+EGKK IQ+QLEK+KKY SV+RVLAHTQIRKMKGLKQKKAHL EIQ+NGG IA+KVDYA FEKQ+PVDA+FQKDEMIDII Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYKNWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDII 221
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_ASPFU (60S ribosomal protein L3 OS=Aspergillus fumigatus GN=rpl3 PE=1 SV=2) HSP 1 Score: 289.271 bits (739), Expect = 1.406e-77 Identity = 143/221 (64.71%), Postives = 172/221 (77.83%), Query Frame = 2 Query: 53 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 715 MSHRK+E PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+++PG+K+HKKE EAVTIIET Y++TPRGLRSL TVWA+HLS+EV+RRFYKNW ++ + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAHLMEIQVNGG++A+KVD+A FEK I +D++F+KDEMID+I Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDLDRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVI 219
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3B_SCHPO (60S ribosomal protein L3-B OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2) HSP 1 Score: 285.034 bits (728), Expect = 2.652e-76 Identity = 145/221 (65.61%), Postives = 170/221 (76.92%), Query Frame = 2 Query: 53 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 715 MSH KFE PRHGSLGFLPRKRA+R RGKVKAFPKDD SKP LTAFLGYKAGMTHIVRD+++PGSK+HK+E EAVTIIET YV+TPRGLRSL TVWA+HLSEEV+RRFYKNW +Y E +SI +LE+IKKY SVVRVLAHTQIRK L QKKAHLMEIQVNGG++A+KV++A FEK + + + F+++EMID+I Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLDRPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKNWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVI 218
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3A_SCHPO (60S ribosomal protein L3-A OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 3.464e-76 Identity = 144/221 (65.16%), Postives = 170/221 (76.92%), Query Frame = 2 Query: 53 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 715 MSH KFE PRHGSLGFLPRKRA+R RGKVKAFPKDD SKP LTAFLGYKAGMTHIVRD+++PGSK+HK+E EAVT+IET YV+TPRGLRSL TVWA+HLSEEV+RRFYKNW +Y E +SI +LE+IKKY SVVRVLAHTQIRK L QKKAHLMEIQVNGG++A+KV++A FEK + + + F+++EMID+I Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLDRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKNWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVI 218
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 5.002e-75 Identity = 136/221 (61.54%), Postives = 171/221 (77.38%), Query Frame = 2 Query: 53 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 715 MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+++PG+K HKKE EAVTII+T Y++TPRGLRSL TVWA+HLS+EV+RRFYKNW ++ + G +I +LE+IKKY +VVRVLAHTQIRK LKQKKAHLMEIQ+NGG++A+KV++ +G FEK + +D++F+KDE+ID+I Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDLDRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYVKKHSDNNG-AAITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQINGGSVADKVEFGHGLFEKPVSIDSIFEKDEVIDVI 219
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3) HSP 1 Score: 280.026 bits (715), Expect = 8.532e-75 Identity = 134/221 (60.63%), Postives = 170/221 (76.92%), Query Frame = 2 Query: 53 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 715 MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+ET YV+TPRGLR+ TV+A+H+S+E +RRFYKNW +++ D GKK ++ +KKY V+R++AHTQ+R + L+QKKAHLMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+I Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVI 220
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2) HSP 1 Score: 280.026 bits (715), Expect = 8.532e-75 Identity = 134/221 (60.63%), Postives = 171/221 (77.38%), Query Frame = 2 Query: 53 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 715 MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+ET YV+TPRGLR+ TV+A+H+S+E +RRFYKNW +++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHLMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+I Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVI 220
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3) HSP 1 Score: 277.33 bits (708), Expect = 5.530e-74 Identity = 133/221 (60.18%), Postives = 170/221 (76.92%), Query Frame = 2 Query: 53 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 715 MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++KKE AVTI+ET YV+TPRGLR+ TV+A+H+S+E +RRFYKNW +++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHLMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+I Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVI 220 The following BLAST results are available for this feature:
BLAST of FC875506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875506 ID=FC875506; Name=FC875506; organism=Citrus clementina; type=EST; length=715bpback to top |