FC875514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875514 vs. ExPASy Swiss-Prot
Match: PHR2_ARATH (Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 2.672e-59 Identity = 119/193 (61.66%), Postives = 143/193 (74.09%), Query Frame = 2 Query: 98 KQNLENPENHSNEEQNPLATIPSQSPFATLSLSFSLPQVLPANTFFIQPKISTLFSHQPNKVKVPTQAXXXXXXXXXXXXXXXXXXXXFKSTLSANPLQSPLSLGPHRPLDPNNGAAIRRASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLXARGS 676 ++NL NPE S EEQNPLA S P A+LSL+ + P++T F++ LF+H PNKVK+PTQA FKST++ANPLQSPLS+ P RP+DP++ AA+RRA++VWFRNDLRVHDNE LN+AN+E VSVLPVYCFDPRDYGKSSSGFDKTGP+RA FLIESVS+LRKNL ARGS Sbjct: 7 EENL-NPETKSAEEQNPLAIFHSSLPIASLSLT-----LFPSSTQFLK-----LFAHHPNKVKIPTQASSLTHLSLSSVSPFPSSRISFKSTIAANPLQSPLSIVPRRPVDPSSAAALRRAAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESVSELRKNLQARGS 188
BLAST of FC875514 vs. ExPASy Swiss-Prot
Match: CRYD_GLOVI (Cryptochrome DASH OS=Gloeobacter violaceus GN=cry PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 41/71 (57.75%), Postives = 58/71 (81.69%), Query Frame = 2 Query: 464 IVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLXARGS 676 +VW+RNDLRVHD+E L +A +++ V+ +YCFDPR +GK+ GF+KTGP+RA FL+ESV+DLR++L GS Sbjct: 7 LVWYRNDLRVHDHEPLTSALHKNARVVALYCFDPRQFGKAPFGFEKTGPFRARFLLESVADLRRSLRQLGS 77
BLAST of FC875514 vs. ExPASy Swiss-Prot
Match: CRYD_SYNY3 (Cryptochrome DASH OS=Synechocystis sp. (strain PCC 6803) GN=cry PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.618e-14 Identity = 33/71 (46.48%), Postives = 52/71 (73.24%), Query Frame = 2 Query: 464 IVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLXARGS 676 +VWFRNDLR+HD+E L+ A +++ VYC+DPR + ++ GF KTGP+R++FL +SV +L ++L G+ Sbjct: 9 LVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQQSVQNLAESLQKVGN 79
BLAST of FC875514 vs. ExPASy Swiss-Prot
Match: CRYD_SOLLC (Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum GN=CRYD PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14 Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 461 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSS-SGFDKTGPYRASFLIESVSDLRKNLXARG 673 +IVWFRNDLRV DNE+L A S ++LPVYC DPR +G + G KTG RA F+IE ++DL++NL RG Sbjct: 80 AIVWFRNDLRVLDNEALLRAWVSSEAILPVYCVDPRLFGTTHYFGMPKTGALRAQFIIECLNDLKRNLVKRG 151
BLAST of FC875514 vs. ExPASy Swiss-Prot
Match: CRYD_XENLA (Cryptochrome DASH OS=Xenopus laevis GN=cry-dash PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.833e-14 Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 455 RASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDY-GKSSSGFDKTGPYRASFLIESVSDLRKNLXARGS 676 R I RNDLR+HDNE L+ A+ + ++P+YCFDPR Y G F KTGP+R FL+ESV DLR L +GS Sbjct: 6 RVIICLLRNDLRLHDNEVLHWAHRNADQIVPLYCFDPRHYVGTHYFNFPKTGPHRLKFLLESVRDLRITLKKKGS 80
BLAST of FC875514 vs. ExPASy Swiss-Prot
Match: CRYD_ORYSJ (Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CRYD PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13 Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 2 Query: 461 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSS--GFDKTGPYRASFLIESVSDLRKNLXARG 673 +IVWFRNDLRV DNE++ A S +VLPVYC DPR S+ GF KTG RA FLIE + DL++NL +G Sbjct: 86 AIVWFRNDLRVLDNEAVVRAWAASDAVLPVYCVDPRISAGSTHYFGFPKTGALRAQFLIECLEDLKRNLTKQG 158
BLAST of FC875514 vs. ExPASy Swiss-Prot
Match: CRYD_DANRE (Cryptochrome DASH OS=Danio rerio GN=cry-dash PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.449e-13 Identity = 37/75 (49.33%), Postives = 46/75 (61.33%), Query Frame = 2 Query: 455 RASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDY-GKSSSGFDKTGPYRASFLIESVSDLRKNLXARGS 676 R I RNDLR+HDNE + A + ++P+YCFDPR Y G F KTGP+R FL++SV DLR L GS Sbjct: 5 RTVICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRLRFLLDSVKDLRALLKKHGS 79
BLAST of FC875514 vs. ExPASy Swiss-Prot
Match: CRYD_ARATH (Cryptochrome DASH, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CRYD PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 8.423e-13 Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 2 Query: 461 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSS-SGFDKTGPYRASFLIESVSDLRKNLXARG 673 +I+WFRNDLRV DN++L A + S ++LPVYC DPR + + F KTG R FL+E + DLRKNL RG Sbjct: 86 TILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRLFHTTHFFNFPKTGALRGGFLMECLVDLRKNLMKRG 157
BLAST of FC875514 vs. ExPASy Swiss-Prot
Match: CRYD_NATPD (Cryptochrome DASH OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=cry PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.622e-11 Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 2 Query: 461 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLXARG 673 ++VWFR+DLRV DN +L A + +V+PVY FDP Y +S G KTG +RA F ++V+DLR +L RG Sbjct: 4 AVVWFRDDLRVTDNPTLADAVAAAETVIPVYTFDPDRYTESEYGPPKTGGHRAVFRRQAVADLRASLRDRG 74
BLAST of FC875514 vs. ExPASy Swiss-Prot
Match: CRYD_RHOBA (Cryptochrome DASH OS=Rhodopirellula baltica GN=cry PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 2 Query: 461 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLXARG 673 ++VWFRNDLR D+E A+ V+C DPR + + GF +TGP+RA FLIE+++DLR L + G Sbjct: 4 ALVWFRNDLRTIDHEPFLRASTAD-RCFAVHCIDPRQFETTELGFQRTGPFRARFLIENLTDLRSRLRSLG 73 The following BLAST results are available for this feature:
BLAST of FC875514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875514 ID=FC875514; Name=FC875514; organism=Citrus clementina; type=EST; length=678bpback to top |