FC875526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875526 vs. ExPASy Swiss-Prot
Match: FLA17_ARATH (Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana GN=FLA17 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.629e-46 Identity = 97/159 (61.01%), Postives = 116/159 (72.96%), Query Frame = 2 Query: 239 MDPQIYG-------LAFFFLLVVPSVTALPHKTTXXXXXXXXXXXXVLVALLDSHYTEQAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLI 694 MD +IYG FF +L+ + +AL + VLVALLDS YTE AELVEKALLLQTLE+AVGRHNITIFAP+NEALER+LDPEFKRFLLEPGN+KSLQTLLMFHI+P+R+GS WP E+SG KH+TL ND V LS+ K+++ Sbjct: 1 MDRRIYGGSAVIHLFLFFSVLIFSAASALSKNQSPSSGSGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPNRVGSNQWPSEESGRVKHHTLGNDQVRLSNGQGKKMV 159
BLAST of FC875526 vs. ExPASy Swiss-Prot
Match: FLA18_ARATH (Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana GN=FLA18 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.252e-42 Identity = 98/165 (59.39%), Postives = 115/165 (69.70%), Query Frame = 2 Query: 239 MDPQIYG-------LAFFFLLVVPSVTALPHKTTXXXXXXXXXXXXVLVALLDSHYTEQAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFV-HLS---SKSSKRLIGS 700 MD IYG +FFFLL ++ + H T VLVALLDS YTE AELVEKALLLQTLE+AVGRHNITIFAP+NEALER+LDP+FKRFLL+PGN+KSLQTLL+ HI+P R+GS WP+E SG KH TL +D V HLS + KRL+ S Sbjct: 1 MDRCIYGCSVITIFFSFFFLLNASALESGHHNITGSGQINSNS---VLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPDFKRFLLQPGNLKSLQTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKGTNGKRLVNS 162
BLAST of FC875526 vs. ExPASy Swiss-Prot
Match: FLA15_ARATH (Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana GN=FLA15 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.962e-37 Identity = 86/138 (62.32%), Postives = 97/138 (70.29%), Query Frame = 2 Query: 260 LAFFFLLVVPSVTALPHKTTXXXXXXXXXXXXVLVALLDSHYTEQAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSS 673 L FF LL + TALP K VLVALLDSHYTE AELVEKALLLQTLEEAVG+HNITIFAP+N+ALE+ LDPEFK FLL+P N+KSLQ+LLMFHILP RI S P S H TL ND +H ++ Sbjct: 7 LLFFLLLTISITTALPDKP----GSGQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGQHNITIFAPRNDALEKNLDPEFKSFLLQPKNLKSLQSLLMFHILPKRITS---PQFSSAVVSHRTLSNDHLHFTN 137
BLAST of FC875526 vs. ExPASy Swiss-Prot
Match: FLA16_ARATH (Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana GN=FLA16 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.996e-36 Identity = 85/139 (61.15%), Postives = 95/139 (68.35%), Query Frame = 2 Query: 254 YGLAFFFLLVVPSVTALPHKTTXXXXXXXXXXXXVLVALLDSHYTEQAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLS 670 YG F LL+ + + VLVALLDSHYTE AELVEKALLLQTLEEAVG+HNITIFAP+N+ALER LDP FK FLLEP N+KSLQ+LLMFHILP RI S WP S S H TL ND +HL+ Sbjct: 5 YGATKFLLLLFLTTSIATALPDNKPVPGQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKSFLLEPRNLKSLQSLLMFHILPKRITSPQWP---SLSHHHRTLSNDHLHLT 140 The following BLAST results are available for this feature:
BLAST of FC875526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875526 ID=FC875526; Name=FC875526; organism=Citrus clementina; type=EST; length=700bpback to top |