FC875540
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875540 vs. ExPASy Swiss-Prot
Match: IF5_MAIZE (Eukaryotic translation initiation factor 5 OS=Zea mays GN=EIF5 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.262e-39 Identity = 80/86 (93.02%), Postives = 82/86 (95.35%), Query Frame = 2 Query: 440 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVHGAHDTAK 697 MALQNIGASN DDAFYRYKMP+MITKIEGRGNGIKTNVVNMVDIAKALARP SYTTKYFG ELGAQSKFDEKTG SLV+GAHDTAK Sbjct: 1 MALQNIGASNRDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGISLVNGAHDTAK 86
BLAST of FC875540 vs. ExPASy Swiss-Prot
Match: IF5_PHAVU (Eukaryotic translation initiation factor 5 OS=Phaseolus vulgaris GN=EIF5 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.154e-38 Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 2 Query: 440 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVHGAHDTAK 697 MALQNIGA NSDDAFYRYKMP+M+TKIEGRGNGIKTNVVNMVDIAK LARP SYTTKYFG ELGAQSKFDEKTGTS V+GAH+TAK Sbjct: 1 MALQNIGAGNSDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKRLARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHETAK 86
BLAST of FC875540 vs. ExPASy Swiss-Prot
Match: IF5Y_ARATH (Probable eukaryotic translation initiation factor 5-1 OS=Arabidopsis thaliana GN=At1g36730 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.054e-37 Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 2 Query: 440 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVHGAHDTAK 697 MALQNIGASN DDAFYRYKMP+M+TKIEGRGNGIKTNVVNMV+IAKAL RP +YTTKYFG ELGAQSKFDEK GTSLV+GAHDT+K Sbjct: 1 MALQNIGASNRDDAFYRYKMPRMMTKIEGRGNGIKTNVVNMVEIAKALGRPAAYTTKYFGCELGAQSKFDEKNGTSLVNGAHDTSK 86
BLAST of FC875540 vs. ExPASy Swiss-Prot
Match: IF5Z_ARATH (Probable eukaryotic translation initiation factor 5-2 OS=Arabidopsis thaliana GN=At1g77840 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.210e-37 Identity = 73/86 (84.88%), Postives = 82/86 (95.35%), Query Frame = 2 Query: 440 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVHGAHDTAK 697 MALQNIGASN +DAFYRYKMPKM+TK EG+GNGIKTN++N V+IAKALARPPSYTTKYFG ELGAQSKFDEKTGTSLV+GAH+T+K Sbjct: 1 MALQNIGASNRNDAFYRYKMPKMVTKTEGKGNGIKTNIINNVEIAKALARPPSYTTKYFGCELGAQSKFDEKTGTSLVNGAHNTSK 86
BLAST of FC875540 vs. ExPASy Swiss-Prot
Match: IF5_RAT (Eukaryotic translation initiation factor 5 OS=Rattus norvegicus GN=Eif5 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 452 NIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVHGAHDTAK 697 N+ S SD FYRYKMP++I K+EG+GNGIKT +VNMVD+AKAL RPP+Y TKYFG ELGAQ++FD K +V+G+H+ K Sbjct: 4 NVNRSVSDQ-FYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANK 84
BLAST of FC875540 vs. ExPASy Swiss-Prot
Match: IF5_PONAB (Eukaryotic translation initiation factor 5 OS=Pongo abelii GN=EIF5 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 452 NIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVHGAHDTAK 697 N+ S SD FYRYKMP++I K+EG+GNGIKT +VNMVD+AKAL RPP+Y TKYFG ELGAQ++FD K +V+G+H+ K Sbjct: 4 NVNRSVSDQ-FYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANK 84
BLAST of FC875540 vs. ExPASy Swiss-Prot
Match: IF5_MOUSE (Eukaryotic translation initiation factor 5 OS=Mus musculus GN=Eif5 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 452 NIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVHGAHDTAK 697 N+ S SD FYRYKMP++I K+EG+GNGIKT +VNMVD+AKAL RPP+Y TKYFG ELGAQ++FD K +V+G+H+ K Sbjct: 4 NVNRSVSDQ-FYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANK 84
BLAST of FC875540 vs. ExPASy Swiss-Prot
Match: IF5_HUMAN (Eukaryotic translation initiation factor 5 OS=Homo sapiens GN=EIF5 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 452 NIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVHGAHDTAK 697 N+ S SD FYRYKMP++I K+EG+GNGIKT +VNMVD+AKAL RPP+Y TKYFG ELGAQ++FD K +V+G+H+ K Sbjct: 4 NVNRSVSDQ-FYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANK 84
BLAST of FC875540 vs. ExPASy Swiss-Prot
Match: IF5_CAEEL (Eukaryotic translation initiation factor 5 OS=Caenorhabditis elegans GN=C37C3.2 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21 Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = 2 Query: 476 DAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVHGAHDTAK 697 D FYRYKMPK+ K+EG+GNGIKT + NM +IAKAL RPP Y TKYFG ELGAQ+ FD K +V+G HD K Sbjct: 11 DPFYRYKMPKLSAKVEGKGNGIKTVISNMSEIAKALERPPMYPTKYFGCELGAQTNFDAKNERYIVNGEHDANK 84
BLAST of FC875540 vs. ExPASy Swiss-Prot
Match: IF5_DROME (Eukaryotic translation initiation factor 5 OS=Drosophila melanogaster GN=eIF5 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 2 Query: 440 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVHGAHDTAK 697 MA N+ S +D FYRYKMP++ K+EG+GNGIKT +VNM ++A+A+ RP +Y TKYFG ELGAQ+ FD K +V+G+HD K Sbjct: 1 MATVNVNRSVTD-IFYRYKMPRLQAKVEGKGNGIKTVLVNMAEVARAIGRPATYPTKYFGCELGAQTLFDHKNERFVVNGSHDVNK 85 The following BLAST results are available for this feature:
BLAST of FC875540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875540 ID=FC875540; Name=FC875540; organism=Citrus clementina; type=EST; length=699bpback to top |