FC875549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875549 vs. ExPASy Swiss-Prot
Match: COPE2_ARATH (Coatomer subunit epsilon-2 OS=Arabidopsis thaliana GN=At2g34840 PE=2 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 1.144e-85 Identity = 159/206 (77.18%), Postives = 182/206 (88.35%), Query Frame = 2 Query: 110 PDHLFNLRNNFYLGAYQAAINNSDLTNLPPDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNVTLRLIAGIVFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVVVPRYRKHISSFR-FL*EVSMTGLILNGR 724 PDHLFNLRNNFYLGAYQ AINNS++ NL P++AVERDCLV+RSYIALGSYQLVISEIDESAATPLQAVKLLA+YLS+P NKESTISSLKEWL+D IG+N TLRLIAGI+FMHEEDYNE LKHT+AGGTM+L+ALNVQIF+KMHR++YAE+QLR MQQIDEDHTLTQLA+AWLNLAV + ++ F F + MT LILNG+ Sbjct: 8 PDHLFNLRNNFYLGAYQTAINNSEIANLSPENAVERDCLVFRSYIALGSYQLVISEIDESAATPLQAVKLLAMYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYNETLKHTHAGGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFEDFSEKYPMTCLILNGK 213
BLAST of FC875549 vs. ExPASy Swiss-Prot
Match: COPE1_ARATH (Coatomer subunit epsilon-1 OS=Arabidopsis thaliana GN=At1g30630 PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 3.327e-85 Identity = 155/206 (75.24%), Postives = 183/206 (88.83%), Query Frame = 2 Query: 110 PDHLFNLRNNFYLGAYQAAINNSDLTNLPPDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNVTLRLIAGIVFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVVVPRYRKHISSFR-FL*EVSMTGLILNGR 724 PDHLFNLRN+FYLGAYQAAINNS++ NL +D VERDCLV+R+YIALGSYQLVISEIDE+AATPLQAVKLLA+YLSSP+NKESTISSL+EWL+DP +G+N +RLIAG +FMHEEDYNEALKHT++GGTM+LHALNVQIF+KMHRSD+AE+QLR MQQIDEDHTLTQLA+AWLNLAV + ++ F+ F + MT LILNG+ Sbjct: 7 PDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEIDEAAATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDYNEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGK 212
BLAST of FC875549 vs. ExPASy Swiss-Prot
Match: COPE1_ORYSJ (Coatomer subunit epsilon-1 OS=Oryza sativa subsp. japonica GN=COPE1 PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.267e-76 Identity = 148/206 (71.84%), Postives = 172/206 (83.50%), Query Frame = 2 Query: 110 PDHLFNLRNNFYLGAYQAAINNSDLTNLPPDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNVTLRLIAGIVFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVVVPRYRKHISSFR-FL*EVSMTGLILNGR 724 PD LFNLRN FYLGAYQAAINNSD+ L D A ERD +V+RSY+ALGSYQLVISEID SAAT LQAVKLLALYLS +KES I SLKEWLSD A+GSN LRLIAGI+FMHE+DY EALKHT++GGT++LHALNVQIF+KMHRSDYAE+QL+ MQQIDEDHTLTQLANAWL++AV + R+ F+ F + MTG++LNG+ Sbjct: 4 PDLLFNLRNLFYLGAYQAAINNSDVPGLDADAAAERDAIVFRSYVALGSYQLVISEIDSSAATSLQAVKLLALYLSG--DKESAIVSLKEWLSDSAVGSNPVLRLIAGIIFMHEQDYTEALKHTHSGGTLDLHALNVQIFIKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLDIAVGGSKIREAYLIFQDFAEKYPMTGMVLNGK 207
BLAST of FC875549 vs. ExPASy Swiss-Prot
Match: COPE2_ORYSJ (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. japonica GN=Os04g0644700 PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.136e-59 Identity = 127/211 (60.19%), Postives = 151/211 (71.56%), Query Frame = 2 Query: 110 PDHLFNLRNNFYLGAYQAAINNSDL----TNLPPDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSS-PDNKESTISSLKEWLSDPAIGSNVTLRLIAGIVFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVVVPRYRKHISSFRFL*E-VSMTGLILNGR 724 PDHLF LRN+FY+GAYQA I L PD ERD L+YRSYIA+GS+QLVI EI AATPLQAV+LL +YLS KES I L E L+D A+GSN LRL+AG V MHE DY ALKHTN+GGTMEL A+NVQI L+MHRSD+AE+QLR MQQ+DEDHTLTQLANAW++L + + ++ F+ L E T LILNG+ Sbjct: 7 PDHLFGLRNSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSHQLVIDEIGPGAATPLQAVRLLTVYLSGGAGGKESAIRKLNELLADDAVGSNPILRLVAGTVLMHERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGK 217
BLAST of FC875549 vs. ExPASy Swiss-Prot
Match: COPE2_ORYSI (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. indica GN=H0413E07.10 PE=3 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 9.124e-59 Identity = 127/211 (60.19%), Postives = 151/211 (71.56%), Query Frame = 2 Query: 110 PDHLFNLRNNFYLGAYQAAINNSDL----TNLPPDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSS-PDNKESTISSLKEWLSDPAIGSNVTLRLIAGIVFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVVVPRYRKHISSFRFL*E-VSMTGLILNGR 724 PDHLF LR +FY+GAYQA I L PD ERD L+YRSYIA+GS+QLVI EI AATPLQAV+LLA+YLS KES I L E L+D A+GSN LRL+AG V MHE DY ALKHTN+GGTMEL A+NVQI L+MHRSD+AE+QLR MQQ+DEDHTLTQLANAW++L + + ++ F+ L E T LILNG+ Sbjct: 7 PDHLFGLRYSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSHQLVIDEIGPGAATPLQAVRLLAVYLSGGAGGKESAIRKLNELLADDAVGSNPILRLVAGTVLMHERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGK 217
BLAST of FC875549 vs. ExPASy Swiss-Prot
Match: COPE_CRIGR (Coatomer subunit epsilon OS=Cricetulus griseus GN=COPE PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.567e-34 Identity = 85/211 (40.28%), Postives = 131/211 (62.09%), Query Frame = 2 Query: 113 DHLFNLRNNFYLGAYQAAINNSDLTNLP-PDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNVTLRLIAGIVFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVVVPRYRKHISSFRFL*E-VSMTGLILNGRLFAAC 739 D LF+++N FY+G+YQ IN + L PD VERD +YR+YIA Y +V+ EI S+A LQAV++ A YL++ + +++ + L +S +N T L+A V+ H+++ + AL+ + G ++E A+ +QI LK+ R D A ++L+ MQ DED TLTQLA AW+NLAV + ++ F+ L + S T L+LNG+ AAC Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKLSSPDREVERDVFLYRAYIAQRKYGVVLDEIKPSSAPELQAVRMFADYLATENRRDAIVVELDREMSRSVDVTNTTFLLMAASVYFHDQNPDAALRTLHQGDSLECMAMTIQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVNLAVGGEKLQEAYYIFQELADKCSPTLLLLNGQ--AAC 225
BLAST of FC875549 vs. ExPASy Swiss-Prot
Match: COPE_MOUSE (Coatomer subunit epsilon OS=Mus musculus GN=Cope PE=2 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 3.491e-34 Identity = 84/211 (39.81%), Postives = 130/211 (61.61%), Query Frame = 2 Query: 113 DHLFNLRNNFYLGAYQAAINNSDLTNLP-PDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNVTLRLIAGIVFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVVVPRYRKHISSFRFL*E-VSMTGLILNGRLFAAC 739 D LF+++N FY+G+YQ IN + L P+ VERD +YR+Y+A Y +V+ EI S+A LQAV++ A YL+S + ++S + L +S +N T L+A ++ H+++ + AL+ + G +E A+ +QI LK+ R D A ++L+ MQ DED TLTQLA AW+NLAV + ++ F+ L + S T L+LNG+ AAC Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKLSSPEREVERDVFLYRAYLAQRKYGVVLDEIKPSSAPELQAVRMFAEYLASENQRDSIVLELDREMSRSVDVTNTTFLLMAASIYFHDQNPDAALRTLHQGDGLECMAMTIQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVNLAVGGEKLQEAYYIFQELADKCSPTLLLLNGQ--AAC 225
BLAST of FC875549 vs. ExPASy Swiss-Prot
Match: COPE_CHICK (Coatomer subunit epsilon OS=Gallus gallus GN=COPE PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.560e-34 Identity = 81/211 (38.39%), Postives = 134/211 (63.51%), Query Frame = 2 Query: 113 DHLFNLRNNFYLGAYQAAINNSD-LTNLPPDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNVTLRLIAGIVFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVVVPRYRKHISSFRFL*E-VSMTGLILNGRLFAAC 739 D LF+++N+FY+GAYQAAIN + + P+ ERD ++RSYIA Y +V+ EI +A+ LQAV++ A YLS+ +++ ++ L + ++ +N T L+A ++ H+++ + AL+ + G ++E A+ +QI LK+ R D A ++L+ MQ+ DED TLTQLA AW+NLA+ + + F+ + + S T L+LNG+ AAC Sbjct: 17 DELFDVKNSFYIGAYQAAINEAQRIKPSNPEKETERDVFLFRSYIAQRKYGVVLDEIKANASPELQAVRMFAEYLSNESQRDAIVADLDKKMAKSVDVANTTFLLMAASIYFHDKNPDAALRTLHQGESLECMAMMIQILLKLDRLDLARKELKKMQEQDEDATLTQLATAWVNLAIGGEKLQDAYYIFQEMADKCSSTLLLLNGQ--AAC 225
BLAST of FC875549 vs. ExPASy Swiss-Prot
Match: COPE_PONAB (Coatomer subunit epsilon OS=Pongo abelii GN=COPE PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.042e-33 Identity = 80/211 (37.91%), Postives = 130/211 (61.61%), Query Frame = 2 Query: 113 DHLFNLRNNFYLGAYQAAINNSDLTNLP-PDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNVTLRLIAGIVFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVVVPRYRKHISSFRFL*E-VSMTGLILNGRLFAAC 739 D LF+++N FY+G+YQ IN + L P+ VERD +YR+Y+A + +V+ EI S+A LQAV++ A YL+ ++S ++ L +S +N T L+A +++H+++ + AL+ + G ++E A+ VQI LK+ R D A ++L+ MQ +DED TLTQLA AW++LA + + F+ + + S T L+LNG+ AAC Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKLSSPETDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLLLNGQ--AAC 225
BLAST of FC875549 vs. ExPASy Swiss-Prot
Match: COPE_HUMAN (Coatomer subunit epsilon OS=Homo sapiens GN=COPE PE=1 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 6.585e-33 Identity = 80/211 (37.91%), Postives = 130/211 (61.61%), Query Frame = 2 Query: 113 DHLFNLRNNFYLGAYQAAINNSDLTNLP-PDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNVTLRLIAGIVFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVVVPRYRKHISSFRFL*E-VSMTGLILNGRLFAAC 739 D LF+++N FY+G+YQ IN + L P+ VERD +YR+Y+A + +V+ EI S+A LQAV++ A YL+ ++S ++ L +S +N T L+A +++H+++ + AL+ + G ++E A+ VQI LK+ R D A ++L+ MQ +DED TLTQLA AW++LA + + F+ + + S T L+LNG+ AAC Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLLLNGQ--AAC 225 The following BLAST results are available for this feature:
BLAST of FC875549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875549 ID=FC875549; Name=FC875549; organism=Citrus clementina; type=EST; length=741bpback to top |