FC875608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.154e-62 Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 2 Query: 320 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP P Sbjct: 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 119
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.266e-62 Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 2 Query: 320 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP P Sbjct: 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 119
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.677e-52 Identity = 97/116 (83.62%), Postives = 104/116 (89.66%), Query Frame = 2 Query: 329 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP P Sbjct: 2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.677e-52 Identity = 97/116 (83.62%), Postives = 104/116 (89.66%), Query Frame = 2 Query: 329 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP P Sbjct: 2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.677e-52 Identity = 97/116 (83.62%), Postives = 104/116 (89.66%), Query Frame = 2 Query: 329 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP P Sbjct: 2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.677e-52 Identity = 97/116 (83.62%), Postives = 104/116 (89.66%), Query Frame = 2 Query: 329 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP P Sbjct: 2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.677e-52 Identity = 97/116 (83.62%), Postives = 104/116 (89.66%), Query Frame = 2 Query: 329 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP P Sbjct: 2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.917e-51 Identity = 93/116 (80.17%), Postives = 107/116 (92.24%), Query Frame = 2 Query: 329 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 S+LPRRIIKETQRL+ EP PGI+A P E+N RYF+V++ GP SP+EGGVFKLELFLPE+YPM+APKVRF+TKIYHPNID+LGRICLD+LKDKWSPALQIRT+LLSIQALLSAP P Sbjct: 2 SSLPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNP 117
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.810e-51 Identity = 96/116 (82.76%), Postives = 103/116 (88.79%), Query Frame = 2 Query: 329 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DK GRICLDILKDKWSPALQIRTVLLSIQALLSAP P Sbjct: 2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117
BLAST of FC875608 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 2.470e-50 Identity = 95/116 (81.90%), Postives = 105/116 (90.52%), Query Frame = 2 Query: 329 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPTP 676 + LP+RIIKETQRL++EPAPGISA+P+ DN RYF V I GP SP+EGGVF LELFL ++YPM+APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP P Sbjct: 2 ATLPKRIIKETQRLMTEPAPGISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117 The following BLAST results are available for this feature:
BLAST of FC875608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875608 ID=FC875608; Name=FC875608; organism=Citrus clementina; type=EST; length=707bpback to top |