FC875634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875634 vs. ExPASy Swiss-Prot
Match: SCL30_ARATH (Scarecrow-like protein 30 OS=Arabidopsis thaliana GN=SCL30 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.518e-27 Identity = 86/195 (44.10%), Postives = 106/195 (54.36%), Query Frame = 1 Query: 145 RGRKNDQREDSDYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHCETKKDXXXXXXXXXXXXNGSSRKLQQNGQXXXXXXXXXXXXXXXXXXXEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYHFANQTI 729 R R D ED D LE GR+SKL A+S D E+F+EVLL C+ K D GSS + +Q + VD+R LL CAQAVAS DQR A E+LK+IR HSS GD TQRL ++FA+ALEAR+ G T + S RTS DILKAY+ + A P + M Y AN+TI Sbjct: 135 RYRHRDDDEDDD-LESGRKSKLPAISTV--DELAEKFEEVLLV-CQ-KNDQGEATEKKTRHVKGSSNRYKQQKSD------------------QPVDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYHFAEALEARITGTMTTPISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTI 306
BLAST of FC875634 vs. ExPASy Swiss-Prot
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 9.837e-27 Identity = 85/209 (40.67%), Postives = 117/209 (55.98%), Query Frame = 1 Query: 124 HHSSYGS-----RGRKNDQR-EDSDYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHCETKKDXXXXXXXXXXXXNGSSRKLQQNGQXXXXXXXXXXXXXXXXXXXEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISC-RTSAADILKAYQMSLSAWPFIRMSYHFANQTI 729 HH SY G+K+ R ED D++E+ R +K SAV + S++ E FD++L+ C K + Q NG E DLR LL LCAQAV+ +D+RTANE L+QIR HSS G+G++RLAHYFA++LEARL G T ++T +S +TSAAD+LKAYQ +S PF + + FAN ++ Sbjct: 289 HHHSYAPPPNRLTGKKSHWRDEDEDFVEE-RSNKQSAVYVEESELS-EMFDKILV--CGPGKPVCILNQNFPTE-SAKVVTAQSNGAKIRGKKSTSTSHSNDSKK-ETADLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSM 491
BLAST of FC875634 vs. ExPASy Swiss-Prot
Match: SCL33_ARATH (Scarecrow-like protein 33 OS=Arabidopsis thaliana GN=SCL33 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.133e-25 Identity = 83/245 (33.88%), Postives = 133/245 (54.29%), Query Frame = 1 Query: 1 VPNLHGEIESLLK-REGVNFAPKVSLPKHGEGVLLSSADDGRHHSSYGSRGRKNDQREDSDYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHCETKKDXXXXXXXXXXXXNGSSRKLQQNGQXXXXXXXXXXXXXXXXXXXEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISC-RTSAADILKAYQMSLSAWPFIRMSYHFANQTI 729 V N+ + + L+ ++G+ A K LPK + V+ +S + G+K+ RE+ ++L + R K SA+ + +D + FD +L+ E K+ + ++ + E DLR +L CAQAV+ ND+RTA+E L +IR+HSS++GDGT+RLAHYFA++LEARL G T ++T +S +TS +D+LKAYQ +S PF +++ FAN +I Sbjct: 188 VSNMFNDTDLALQFKKGMEEASKF-LPKSSQLVIDNSVPNRL-------TGKKSHWREE-EHLTEERSKKQSAIYVDETDELTDMFDNILI-FGEAKEQPVCILNESFPKEPAKASTFSKSPKGEKPEASGNSYTK------ETPDLRTMLVSCAQAVSINDRRTADELLSRIRQHSSSYGDGTERLAHYFANSLEARLAGIGTQVYTALSSKKTSTSDMLKAYQTYISVCPFKKIAIIFANHSI 416
BLAST of FC875634 vs. ExPASy Swiss-Prot
Match: SCL9_ARATH (Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23 Identity = 87/226 (38.50%), Postives = 116/226 (51.33%), Query Frame = 1 Query: 142 SRGRKNDQREDSDYLEQGRRSKLSAV---SLAVSDV------------KLERFD---EVLLRHCETKKDXXXXXXXXXXXXNGSSRKLQQNGQXXXXXXXXXXXXXXXXXXXEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHI-SCRTSAADILKAYQMSLSAWPFIRMSYHFANQTIK----N*QRKH 750 S+ RKN R D +E+ R SKL AV + SDV ++ F+ +VL + E KK G R+ + G+ EVVDLR LL CAQAVA++D+R A + LKQIR HS+ FGDG QRLAH FA+ LEARL G + ++ I S SAA +LKA+Q+ L+ PF ++SY N+TI+ N QR H Sbjct: 243 SKARKNSSR-DEICVEEERSSKLPAVFGEDILRSDVVDKILVHVPGGESMKEFNALRDVLKKGVEKKK---------ASDAQGGKRRARGRGRGRGRGGGGGQNGKK-----EVVDLRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVH 453
BLAST of FC875634 vs. ExPASy Swiss-Prot
Match: SCL31_ARATH (Scarecrow-like protein 31 OS=Arabidopsis thaliana GN=SCL31 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.507e-22 Identity = 82/205 (40.00%), Postives = 113/205 (55.12%), Query Frame = 1 Query: 142 SRGRKN--DQREDSDYLEQGRR-SKLSAVSLAVSDVKL-ERFDEVLLRHCETKKDXXXXXXXXXXXXNGSSRKLQQNGQXXXXXXXXXXXXXXXXXXXEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPM-----HTHISCRTSAADILKAYQMSLSAWPFIRMSYHFANQTI 729 S+ RKN ++ E+ D LE+ RR SK AV+ D KL E FD+VLL D NGSS+ L + G+ VD R LLTLCAQ+V++ D+ TA++ L+QIR+ S GD +QRLAH+FA+ALEARL G+ M + S + +AA ILK+Y + LSA PF+ + Y F+N+ I Sbjct: 202 SKTRKNHHEREEEEDDLEEARRRSKQFAVN--EEDGKLTEMFDKVLLL------DGECDPQIIEDGENGSSKALVKKGRAKKKS--------------RAVDFRTLLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMI 384
BLAST of FC875634 vs. ExPASy Swiss-Prot
Match: SCL11_ARATH (Scarecrow-like protein 11 OS=Arabidopsis thaliana GN=SCL11 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.586e-22 Identity = 81/220 (36.82%), Postives = 107/220 (48.64%), Query Frame = 1 Query: 103 SSADDGRHHSSYGSRGRKNDQREDS-DYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHCETKKDXXXXXXXXXXXXN--------GSSRKLQQNGQXXXXXXXXXXXXXXXXXXXEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTP--MHTHISCRTSAADILKAYQMSLSAWPFIRMSYHFANQTI 729 S+ D S G RK R D D LE RR+K A+ ++ + + + VLL C+T ++ GSS K + + VDLR LLT CAQAVAS DQR A ++LK+IR HSS+ GDGTQRLA YFA+ALEAR+ G +P + S TS DILKAY++ + P Y AN++I Sbjct: 124 STTTDSSALVSSGESQRKYRHRNDEEDDLENNRRNKQPAIFVSEMEELAVKLEHVLLV-CKTNQEEEEERTVITKQSTPNRAGRAKGSSNKSKTH-------------------KTNTVDLRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPPVSNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSI 323
BLAST of FC875634 vs. ExPASy Swiss-Prot
Match: SCL34_ARATH (Scarecrow-like protein 34 OS=Arabidopsis thaliana GN=SCL34 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.860e-19 Identity = 85/253 (33.60%), Postives = 124/253 (49.01%), Query Frame = 1 Query: 1 VPNLHGEIESLLK-REGVNFAPKVSLPKHGEGVLLSSADDGRHHSSYGS-------RGRKNDQREDSDYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHCETKKDXXXXXXXXXXXXNGSSRKLQQNGQXXXXXXXXXXXXXXXXXXXEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPM-HTHISCRTS-----AADILKAYQMSLSAWPFIRMSYHFA 717 V ++ + ES L+ ++GV A K LP + V+ + S R +KN +R+ E+ R SK A ++ S V + FD+VLL E SS+ + + G+ +VVD R LLT CAQA+++ D+ TA E L QIR+ SS GD QRLAH FA+ALEARL G+ PM T+ + TS AAD ++AY++ LS+ PF+ + Y F+ Sbjct: 117 VKSMFSDAESALQFKKGVEEASKF-LPNSDQWVINLDIERSERRDSVKEEMGLDQLRVKKNHERD----FEEVRSSKQFASNVEDSKVT-DMFDKVLLLDGECDPQTLLDSEIQAIR---SSKNIGEKGKKKKKKKS------------QVVDFRTLLTHCAQAISTGDKTTALEFLLQIRQQSSPLGDAGQRLAHCFANALEARLQGSTGPMIQTYYNALTSSLKDTAADTIRAYRVYLSSSPFVTLMYFFS 348 The following BLAST results are available for this feature:
BLAST of FC875634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875634 ID=FC875634; Name=FC875634; organism=Citrus clementina; type=EST; length=767bpback to top |