FC875636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DROPS (Spastin OS=Drosophila pseudoobscura pseudoobscura GN=spas PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 5.875e-37 Identity = 80/158 (50.63%), Postives = 113/158 (71.52%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGNCNMADGYSGS 469 A+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + GEHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D D L + DGYSGS Sbjct: 563 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSLLSERSS-GEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTDALRRLSKITDGYSGS 719
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DROPE (Spastin OS=Drosophila persimilis GN=spas PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 5.875e-37 Identity = 80/158 (50.63%), Postives = 113/158 (71.52%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGNCNMADGYSGS 469 A+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + GEHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D D L + DGYSGS Sbjct: 563 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSLLSERSS-GEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTDALRRLSKITDGYSGS 719
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_ANOGA (Spastin OS=Anopheles gambiae GN=spas PE=3 SV=5) HSP 1 Score: 152.525 bits (384), Expect = 1.002e-36 Identity = 77/158 (48.73%), Postives = 114/158 (72.15%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGNCNMADGYSGS 469 A+AVATE A F +IS +++TSK+ G+GEK V+A+F++A ++ PS++F+DEVDS+L R + EHEA R++K EF+V +DGL + +R++V+AATNRP +LDEA +RR P+R+ V LPD RE ++R +L K+ SD DL + +GYSGS Sbjct: 553 ARAVATECSATFFSISAATLTSKYVGDGEKLVRALFAVARELQPSIIFIDEVDSVLSERSS-NEHEATRRLKTEFLVQFDGLPANSEADRIVVMAATNRPQELDEAALRRFPKRVYVTLPDRDTRELLLRRLLQKQGSPLSDADLAHLAQLTEGYSGS 709
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.002e-36 Identity = 75/159 (47.17%), Postives = 109/159 (68.55%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 AKA A +G FIN+ S++T KW+GE +K AVFSLA KI P ++F+DE+DS L R + +HEA MK +FM WDGL T + +V+V+ ATNRP D+D A++RR+P V LP+A RE+I+R+IL+ E L++ ++L+ + ++GYSGS K Sbjct: 146 AKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSM-DHEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILRRMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLK 303
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: ATAD1_RAT (ATPase family AAA domain-containing protein 1 OS=Rattus norvegicus GN=Atad1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.233e-36 Identity = 77/159 (48.43%), Postives = 102/159 (64.15%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 AKA A EAG FIN+ S++T KW+GE +K AVFSLA K+ PS++F+DE+DS L R + +HEA MK +FM WDGL T +V+V+ ATNRP DLD A++RR+P R +N P RE I+++IL E + VDL DG+SGS K Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFL-RNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLK 300
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: ATAD1_MOUSE (ATPase family AAA domain-containing protein 1 OS=Mus musculus GN=Atad1 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.233e-36 Identity = 77/159 (48.43%), Postives = 102/159 (64.15%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 AKA A EAG FIN+ S++T KW+GE +K AVFSLA K+ PS++F+DE+DS L R + +HEA MK +FM WDGL T +V+V+ ATNRP DLD A++RR+P R +N P RE I+++IL E + VDL DG+SGS K Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFL-RNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLK 300
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: ATAD1_HUMAN (ATPase family AAA domain-containing protein 1 OS=Homo sapiens GN=ATAD1 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.233e-36 Identity = 77/159 (48.43%), Postives = 102/159 (64.15%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSK 478 AKA A EAG FIN+ S++T KW+GE +K AVFSLA K+ PS++F+DE+DS L R + +HEA MK +FM WDGL T +V+V+ ATNRP DLD A++RR+P R +N P RE I+++IL E + VDL DG+SGS K Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFL-RNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLK 300
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: ATD1B_DANRE (ATPase family AAA domain-containing protein 1-B OS=Danio rerio GN=atad1b PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 3.808e-36 Identity = 74/156 (47.44%), Postives = 103/156 (66.03%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469 AKA A EAG FIN+ S++T KW+GE +K AVFSLA K+ PS++F+DE+DS L R + +HEA MK +FM WDGL T +V+++ ATNRP DLD A++RR+P R +N P+ R+ I+++IL E + S V+L DG+SGS Sbjct: 147 AKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFL-RNRSSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILRRMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGS 301
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DROGR (Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 4.974e-36 Identity = 78/158 (49.37%), Postives = 112/158 (70.89%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGN-CNMADGYSGS 469 A+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D D G + +GYSGS Sbjct: 557 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDVQTRELLLNRLLQKQGSPLDSDALGRLAKITEGYSGS 713
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SPAST_DROYA (Spastin OS=Drosophila yakuba GN=spas PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 8.484e-36 Identity = 78/158 (49.37%), Postives = 112/158 (70.89%), Query Frame = 2 Query: 2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGNCNMADGYSGS 469 A+AVATE A F+NIS +S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D + L + DGYSGS Sbjct: 533 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGS 689 The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bpback to top |