FC875640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875640 vs. ExPASy Swiss-Prot
Match: EIF3A_ARATH (Eukaryotic translation initiation factor 3 subunit A OS=Arabidopsis thaliana GN=TIF3A1 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 7.704e-48 Identity = 110/202 (54.46%), Postives = 128/202 (63.37%), Query Frame = 2 Query: 26 FCNLGLESDGLRDHLTIFAQSLNKVRALIYPPANKASKLGEMLAGLGEIVDKEHKRLLARKSIIEKRKXXXXXXXXXXXXXXXXXXLKQQKITEEAEQKRLAAEFEHRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKQTLMERALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIDAAFQ 631 F NLG+ESDGLRDHL +FA+SL+KVRA++YP +KASKL ++ L + V+KEHKRLLARKSIIEKRK LK QK+TEEAEQKRLAAE R+ VTKQ++ ERALTEQL+ERQEMEKKLQKLAKTMDYLERAKREEAAPLI+AA+Q Sbjct: 508 FGNLGIESDGLRDHLAVFAESLSKVRAMLYPVPSKASKLAGVIPNLADTVEKEHKRLLARKSIIEKRKEDQERQQLEMEREEEQKRLKLQKLTEEAEQKRLAAELAERRK-QRILREIEEKELEEAQALLEETEKRMKKGKKKPLLDGEKVTKQSVKERALTEQLKERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQ 708
BLAST of FC875640 vs. ExPASy Swiss-Prot
Match: EIF3A_TOBAC (Eukaryotic translation initiation factor 3 subunit A OS=Nicotiana tabacum GN=TIF3A1 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.534e-38 Identity = 93/184 (50.54%), Postives = 111/184 (60.33%), Query Frame = 2 Query: 80 AQSLNKVRALIYPPANKASKLGEMLAGLGEIVDKEHKRLLARKSIIEKRKXXXXXXXXXXXXXXXXXXLKQQKITEEAEQKRLAAEFEHRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKQTLMERALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIDAAFQ 631 A+SL+K R +IYPPA KA+KLGE L+ L EIV+KEHKRLLARKSIIEKRK QK+TEEAEQKR+AAE+E R+N +TK+ +ME AL EQLRERQEMEKKL K AK+MD+LERAKREEAAPLI++AF+ Sbjct: 526 AESLSKARTMIYPPAKKAAKLGEALSNLAEIVEKEHKRLLARKSIIEKRKEEQERLLLEMERVEETKRRDVQKMTEEAEQKRIAAEYEQRRN--QRILKEIEDRELEEAQALLHEAEKRSKRKKKPVLEGEKMTKKVIMELALNEQLRERQEMEKKLLKFAKSMDHLERAKREEAAPLIESAFK 707
BLAST of FC875640 vs. ExPASy Swiss-Prot
Match: EIF3A_MAIZE (Eukaryotic translation initiation factor 3 subunit A OS=Zea mays GN=TIF3A1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.269e-34 Identity = 90/202 (44.55%), Postives = 104/202 (51.49%), Query Frame = 2 Query: 26 FCNLGLESDGLRDHLTIFAQSLNKVRALIYPPANKASKLGEMLAGLGEIVDKEHKRLLARKSIIEKRKXXXXXXXXXXXXXXXXXXLKQQKITEEAEQKRLAAEFEHRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKQTLMERALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIDAAFQ 631 F + +ESDGL DHL++ A SLNK R I PP K SKLGE L L IV+ EHKRLLARKSIIEKRK + QK T + E+ RL E R+ +TK+ ME A EQL+ER EMEKKLQK AKTMDYLERAKR+E APLI+ AFQ Sbjct: 506 FGTVDIESDGLSDHLSVLADSLNKARIHICPPVKKPSKLGESLISLAAIVENEHKRLLARKSIIEKRKEELERQILEKEKEEEKKRMSSQKKTVDEERVRLLNEQRQREQ-----DRIRREIEEKNKAEAKKMLEDLNKAGKKHVVVEGELTKEAYMELARNEQLKERHEMEKKLQKFAKTMDYLERAKRQEEAPLIEQAFQ 702 The following BLAST results are available for this feature:
BLAST of FC875640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875640 ID=FC875640; Name=FC875640; organism=Citrus clementina; type=EST; length=662bpback to top |