FC875657

Overview
NameFC875657
Unique NameFC875657
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig47 contig Ccv1_Contig47:207..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875657 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 313.153 bits (801), Expect = 9.314e-85
Identity = 159/241 (65.98%), Postives = 178/241 (73.86%), Query Frame = 2
Query:    2 FGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVLLGIVAAVGITFIQFANNNSMRNXXXXXXXXXXXXXXPQYFASKTTEDGHGPVRTGGGRFNDIWNTIFSSPPTVAMIVGTVLDNTLDARDTVAD-RGLPWWKPFQHRKGDSRNDEFYSFPLRINEYIP 721
            FGM GAA+V SAESTG F AASR AGATAPPAHV+SRSIGLQGIG+L+EGIFGS+ G TASVENVGLLGLT IGSRRVVQ+ST FM               IPLPIFA +YC+LLGIV AVGI+FIQF + NSMRN               QYF + T+  G+GPVRT GG FNDI NTIF+S P VA I+ T+LDNTL+AR    D RG+PWWKPFQHR GD RNDEFYS PLRINE +P
Sbjct:  307 FGMFGAAIVASAESTGVFFAASRLAGATAPPAHVVSRSIGLQGIGVLLEGIFGSITGNTASVENVGLLGLTRIGSRRVVQVSTFFMIFFSIFGKFGAFFASIPLPIFAGVYCILLGIVVAVGISFIQFTDTNSMRNMYVIGVSLFLSLSIAQYFLANTSRAGYGPVRTAGGWFNDILNTIFASAPLVATILATILDNTLEARHASDDARGIPWWKPFQHRNGDGRNDEFYSMPLRINELMP 547          
BLAST of FC875657 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 7.414e-66
Identity = 123/240 (51.25%), Postives = 155/240 (64.58%), Query Frame = 2
Query:    2 FGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVLLGIVAAVGITFIQFANNNSMRNXXXXXXXXXXXXXXPQYFASKTTEDGHGPVRTGGGRFNDIWNTIFSSPPTVAMIVGTVLDNTLDARDTVADRGLPWWKPFQHRKGDSRNDEFYSFPLRINEYIP 721
            F M+ A LV+  ESTG F AA+R A AT PP HVLSR IG QGIG+L+ G+FG++ G++ SVEN+GLLG T +GSRRV+QIS  FM               IP  IFAA+YCVL G+VA+VG++F+QF N NS+RN              P+YF   + +  HGP  T  G FND  NTIF S P VA++V   LDNTLD ++T  DRGLPWW  F+  KGDSRN+EFY+ P  +N + P
Sbjct:  283 FAMMAAVLVSLIESTGAFKAAARLASATPPPPHVLSRGIGWQGIGILLNGLFGTLSGSSVSVENIGLLGSTRVGSRRVIQISAGFMIFFSMLGKFGALFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSLRNLFIVGVSLFLGLSIPEYFRDFSMKALHGPAHTNAGWFNDFLNTIFLSSPMVALMVAVFLDNTLDYKETARDRGLPWWAKFRTFKGDSRNEEFYTLPFNLNRFFP 522          
BLAST of FC875657 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.309e-62
Identity = 117/240 (48.75%), Postives = 155/240 (64.58%), Query Frame = 2
Query:    2 FGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVLLGIVAAVGITFIQFANNNSMRNXXXXXXXXXXXXXXPQYFASKTTEDGHGPVRTGGGRFNDIWNTIFSSPPTVAMIVGTVLDNTLDARDTVADRGLPWWKPFQHRKGDSRNDEFYSFPLRINEYIP 721
            F M+ A LV+  ESTG +IAASR A AT PPA+VLSR IG QGIG+L++G+FG+  G+T  VENVGLLGLT +GSRRVVQ+S  FM               IP+PI+AA++C+L G+VAAVG++F+QF N NSMRN              PQ+FA       +G V T  G FN   NT+F SP TV +I+   +DNT++   +  DRG+PWW  F+  +GD+RN+EFY+ P  +N + P
Sbjct:  279 FAMMSAVLVSMVESTGAYIAASRLAIATPPPAYVLSRGIGWQGIGVLLDGLFGTGTGSTVLVENVGLLGLTRVGSRRVVQVSAGFMIVFSTLGKFGAVFASIPVPIYAALHCILFGLVAAVGLSFLQFTNMNSMRNLMITGLSLFLGISIPQFFAQYWDARHYGLVHTNAGWFNAFLNTLFMSPATVGLIIAVFMDNTMEVERSKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFP 518          
BLAST of FC875657 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 8.503e-54
Identity = 111/242 (45.87%), Postives = 140/242 (57.85%), Query Frame = 2
Query:    2 FGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVLLGIVAAVGITFIQFANNNSMRNXXXXXXXXXXXXXXPQYFASKTTEDGHGPVRTGGGRFNDIWNTIFSSPPTVAMIVGTVLDNTLDARDTV--ADRGLPWWKPFQHRKGDSRNDEFYSFPLRINEYIP 721
            F M+ A+ V   ESTG F+A SR+A AT  P  +LSR IG QG+ +L+ G+FG+  G++ SVEN GLL LT +GSRRVVQI+  FM               IP PI AA+YC+    V A G++F+QF N NS R               PQYF   T   G+GPV TG   FND+ N  FSS P VA  V   LDNTL  +D+    DRG  WW  F+  KGD+R++EFYS P  +N+Y P
Sbjct:  289 FAMMMASFVALVESTGAFVAVSRYASATMLPPSILSRGIGWQGVAILISGLFGTGAGSSVSVENAGLLALTRVGSRRVVQIAAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSVFLGLSIPQYFNEYTAIKGYGPVHTGARWFNDMVNVPFSSEPFVAGSVAFFLDNTLHKKDSSIRKDRGKHWWDKFRSFKGDTRSEEFYSLPFNLNKYFP 530          
BLAST of FC875657 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.950e-51
Identity = 109/242 (45.04%), Postives = 142/242 (58.68%), Query Frame = 2
Query:    2 FGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVLLGIVAAVGITFIQFANNNSMRNXXXXXXXXXXXXXXPQYFASKTTEDGHGPVRTGGGRFNDIWNTIFSSPPTVAMIVGTVLDNTLDARD--TVADRGLPWWKPFQHRKGDSRNDEFYSFPLRINEYIP 721
            F M+ A+ V+  ESTGT+IA SR+A AT  P  VLSR IG QG G+L+ G+FG+   T+ SVEN GLL +T +GSRRV+Q++  FM               IP PI AA+YC+    V A G++ IQF N NS R               PQYF   TT + +GPVRT    FN+I N  FSS   V+ I+   LD TL  +D  T  DRGL WWK F+  + D+R++EFYS PL +++Y P
Sbjct:  296 FAMMAASFVSLVESTGTYIAVSRYASATPIPPSVLSRGIGWQGFGILLCGLFGAGNATSVSVENAGLLAVTRVGSRRVIQVAAGFMIFFSILGKFGAIFASIPAPIVAALYCLFFSYVGAGGLSLIQFCNLNSFRTKFILGFSIFMGLSIPQYFYQYTTLETYGPVRTSATWFNNIINVPFSSKAFVSGILAFFLDTTLPPKDKTTKKDRGLVWWKRFKSFQSDNRSEEFYSLPLNLSKYFP 537          
BLAST of FC875657 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.799e-51
Identity = 108/242 (44.63%), Postives = 134/242 (55.37%), Query Frame = 2
Query:    2 FGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVLLGIVAAVGITFIQFANNNSMRNXXXXXXXXXXXXXXPQYFASKTTEDGHGPVRTGGGRFNDIWNTIFSSPPTVAMIVGTVLDNTLDARD--TVADRGLPWWKPFQHRKGDSRNDEFYSFPLRINEYIP 721
            F M+ A+ V   ESTG FIA SR+A AT PP  V+SR +G QG+ +L+ G+FG+ +G++ SVEN GLL LT IGSRRVVQIS  FM               IP PI AA+YC+    V A G++ +QF N NS R               PQYF   T   G+GPV TG   FND+ N  FSS   V   V  +LD TL  +D     DRG  WW  F   K D R +EFY+ P  +N+Y P
Sbjct:  285 FAMMMASFVALVESTGAFIAVSRYASATMPPPSVISRGVGWQGVAILISGLFGTGIGSSVSVENAGLLALTKIGSRRVVQISAGFMIFFSILGKFGAVFASIPSPIIAALYCLFFAYVGAGGLSLLQFCNLNSFRTLFILGFSIFLGLSIPQYFNEHTAIKGYGPVHTGARWFNDMVNVPFSSKAFVGGCVAYLLDTTLHKKDGSIRKDRGKHWWDRFWTFKNDPRTEEFYALPFNLNKYFP 526          
BLAST of FC875657 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 4.367e-50
Identity = 106/242 (43.80%), Postives = 138/242 (57.02%), Query Frame = 2
Query:    2 FGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVLLGIVAAVGITFIQFANNNSMRNXXXXXXXXXXXXXXPQYFASKTTEDGHGPVRTGGGRFNDIWNTIFSSPPTVAMIVGTVLDNTLDARD--TVADRGLPWWKPFQHRKGDSRNDEFYSFPLRINEYIP 721
            F M+  + V+  ESTGT+I  SRFA AT PP  VLSR +G QG+G+L+ G+FG+  G + SVEN GLL LT +GSRRVVQIS  FM               IP P+ AA++C+    V A G++ +QF N NS R               PQYF   T  + +GPV T    FND+ N  FSS   VA I+   LD T+ ++D  T  DRG+ WW  F   K D+R++EFYS P  +N+Y P
Sbjct:  295 FAMMAVSFVSLIESTGTYIVVSRFASATPPPPSVLSRGVGWQGVGVLLCGLFGAGNGASVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAIFASIPAPVVAALHCLFFAYVGAGGLSLLQFCNLNSFRTKFILGFSVFMGLSIPQYFNQYTAVNKYGPVHTHARWFNDMINVPFSSKAFVAGILAFFLDVTMSSKDSATRKDRGMFWWDRFMSFKSDTRSEEFYSLPFNLNKYFP 536          
BLAST of FC875657 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.831e-49
Identity = 108/242 (44.63%), Postives = 133/242 (54.96%), Query Frame = 2
Query:    2 FGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVLLGIVAAVGITFIQFANNNSMRNXXXXXXXXXXXXXXPQYFASKTTEDGHGPVRTGGGRFNDIWNTIFSSPPTVAMIVGTVLD--NTLDARDTVADRGLPWWKPFQHRKGDSRNDEFYSFPLRINEYIP 721
            F M+ A  V   E+TG+FIAASRF  AT  P  VLSR IG QGIG+L+ G+FG+  G+TA VEN GLLGLT +GSRRVVQIS  FM               IPLPIFAA+YCVL   VA+ G+  +QF N NS RN               QYF       G GPV T    FN I   IFSS  TV ++   +LD  ++        D G  WW+ F+    D+R +EFY+ P  +N + P
Sbjct:  283 FAMMAATYVAIVETTGSFIAASRFGSATHIPPSVLSRGIGWQGIGVLLNGLFGTATGSTALVENTGLLGLTKVGSRRVVQISAGFMIFFSIFGKFGAVLASIPLPIFAALYCVLFAYVASAGLGLLQFCNLNSFRNKFILGFSIFIGLSVAQYFTEYLFISGRGPVHTRTSAFNVIMQVIFSSAATVGIMAAFLLDCTHSYGHASVRRDSGRHWWEKFRVYHTDTRTEEFYALPYNLNRFFP 524          
BLAST of FC875657 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.007e-46
Identity = 103/242 (42.56%), Postives = 134/242 (55.37%), Query Frame = 2
Query:    2 FGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVLLGIVAAVGITFIQFANNNSMRNXXXXXXXXXXXXXXPQYFASKTTEDGHGPVRTGGGRFNDIWNTIFSSPPTVAMIVGTVLDNT--LDARDTVADRGLPWWKPFQHRKGDSRNDEFYSFPLRINEYIP 721
            F M+ A+  +  ESTGT IA SR++GAT  P  V SR IG +GI ++++G+ G++ GT ASVEN GLL +T +GSRRV++IS  FM               IPLPIFAA+YCVL    A  G + +Q+ N NS+R               PQYF       G GPV T    FN + N IFSSP TVA I+  +LD T          DRG  WW+ F+  K D R++EFY  P  ++ Y P
Sbjct:  284 FAMLAASFASLIESTGTLIAVSRYSGATFCPPSVFSRGIGWEGISIILDGMCGTLTGTAASVENAGLLAVTRVGSRRVIKISALFMIFFSLFAKFGAVLASIPLPIFAALYCVLFAYSAGAGFSLLQYCNLNSLRTKFILSISLFLGLSIPQYFRVYEMFFGFGPVHTHSVAFNVMVNVIFSSPATVAAILAYLLDCTHLYWEASVKKDRGWFWWEKFKSYKYDGRSEEFYRLPYGLSRYFP 525          
BLAST of FC875657 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 9.751e-42
Identity = 97/242 (40.08%), Postives = 131/242 (54.13%), Query Frame = 2
Query:    2 FGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVLLGIVAAVGITFIQFANNNSMRNXXXXXXXXXXXXXXPQYFASKTTEDGHGPVRTGGGRFNDIWNTIFSSPPTVAMIVGTVLDNTL--DARDTVADRGLPWWKPFQHRKGDSRNDEFYSFPLRINEYIP 721
            F M+ A+ VT  ESTG F A++R+  AT  P  V+SR     G+G+L+ G+ G + G T S ENVGLL +T IGSRRV+QIS AFM               IPLPI A++YC++L  V++VG++++QF N NS                 PQYF  +   +G            D+   IF S  TVA I+  VLD TL  D+ +   D G+ WW  F+    D RNDEFY  P R+N++ P
Sbjct:  300 FAMMAASFVTLFESTGLFYASARYGSATPIPPSVVSRGTCWLGVGVLLNGMLGGITGITTSTENVGLLAMTKIGSRRVIQISAAFMIFFSIFGKFGAFFASIPLPIMASLYCIVLCFVSSVGLSYLQFCNLNSFNIKFILGFSFFMAISIPQYF--REYYNGGWRSDHHSNWLEDMIRVIFMSHTTVAAIIAIVLDCTLCRDSDEAKKDCGMKWWDKFRLYNLDVRNDEFYGLPCRLNKFFP 539          
The following BLAST results are available for this feature:
BLAST of FC875657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
NAT3_ARATH9.314e-8565.98Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]
NAT2_ARATH7.414e-6651.25Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
NAT1_ARATH1.309e-6248.75Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT6_ARATH8.503e-5445.87Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT8_ARATH3.950e-5145.04Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
NAT5_ARATH8.799e-5144.63Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT7_ARATH4.367e-5043.80Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT4_ARATH2.831e-4944.63Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
LPE1_MAIZE1.007e-4642.56Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT10_ARATH9.751e-4240.08Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC31401D05EF CTVClemen1 Citrus clementina cDNA clone C31401D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875657 ID=FC875657; Name=FC875657; organism=Citrus clementina; type=EST; length=724bp
CTTTGGGATGATAGGAGCAGCACTTGTAACATCTGCAGAGTCAACTGGAA
CATTTATCGCAGCATCACGGTTTGCAGGTGCTACAGCTCCTCCAGCACAT
GTCCTCAGCCGAAGTATTGGCCTGCAGGGTATTGGCATGCTGGTTGAAGG
AATTTTTGGTTCTGTTGTTGGTACTACTGCATCTGTGGAAAATGTTGGCC
TTCTCGGACTAACACACATAGGCAGCAGAAGAGTGGTGCAGATTTCAACT
GCGTTCATGATATTTTTCTCCATATTTGGGAAGTTTGGTGCCTTCTTTGC
ATCCATTCCATTGCCAATATTTGCTGCCATATACTGTGTTCTATTAGGCA
TAGTTGCTGCTGTTGGGATTACTTTCATACAGTTTGCAAATAATAATTCC
ATGAGAAACATTTATATTTTGGGCCTCTCTCTGTTCCTTGGCATATCAAT
TCCTCAATACTTTGCCTCGAAAACCACTGAGGATGGTCATGGGCCAGTTA
GAACGGGTGGTGGACGGTTTAATGACATATGGAACACAATCTTTTCATCA
CCTCCAACCGTAGCAATGATCGTTGGGACAGTGCTAGATAACACACTTGA
TGCAAGAGATACAGTTGCCGACAGAGGACTCCCCTGGTGGAAACCCTTCC
AGCACAGGAAGGGCGACTCTAGAAATGACGAGTTCTACAGTTTTCCCCTT
AGGATAAATGAGTATATCCCCCAC
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