FC875697

Overview
NameFC875697
Unique NameFC875697
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14984 contig Ccv1_Contig14984:298..986. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.165e-49
Identity = 105/230 (45.65%), Postives = 137/230 (59.57%), Query Frame = 2
Query:    2 RLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSTRVRDA 682
            RLL SY V     E ++   ER+YS   +GK L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + M   SV     +L+ Y GF+GV  LVDVGG  G  L  I   HP I +GINFDLP V++EAP  PGV H+GGDMFKS+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP ++  V  A
Sbjct:   82 RLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQI-KGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKA 309          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.165e-49
Identity = 102/223 (45.74%), Postives = 140/223 (62.78%), Query Frame = 2
Query:    2 RLLTSYGVF----SEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 658
            RLL +Y V     +   + G ER Y L  + K L  +A+G+S AP +L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF+G+K +VDVGG  G  L MI+ K+P I +GINF+LP VV +APS  GV H+GGDMF S+P  DAIFMKW+   W+DD C+ +++NCY+ALP  GK+I  E VLP+
Sbjct:   69 RLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTI-KGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPE 289          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.391e-49
Identity = 101/223 (45.29%), Postives = 135/223 (60.54%), Query Frame = 2
Query:    2 RLLTSYGVFSEHREF----GGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 658
            RLLTSY +     +     G ER Y L  + K L  + +G+S AP  L +    LM +W  + +AV+D  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF G+K +VDVGG  G  L MI+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E VLP+
Sbjct:   80 RLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPE 300          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.866e-49
Identity = 103/228 (45.18%), Postives = 142/228 (62.28%), Query Frame = 2
Query:    2 RLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD--DST 667
            RLL SY V +    +  + G ER YSL  + K L  + +G+S A  +L +    LM +W  + +AVL+  I PF K +G  A+ Y+GK P  N +  + MS  S   M  +L+ Y GF+G+K +VDVGG  G  L MI+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P  DAIFMKW+   W+D  C   ++NC++ALP  GK+I  E +LP+  DST
Sbjct:   82 RLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGI-PFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSI-KGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDST 307          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.683e-48
Identity = 101/223 (45.29%), Postives = 134/223 (60.09%), Query Frame = 2
Query:    2 RLLTSYGVFSEHREF----GGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 658
            RLLTSY +     +     G +R Y L  + K L  + +G+S AP  L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF G+K +VDVGG  G  L MI+ K+P I +GINFDLP VV +APS PGV H+GGDMF S+P  DAIFMKW+   W+D  C   ++ CY+ALP  GK+I  E VLP+
Sbjct:   80 RLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSI-KGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDAHCVKFLKKCYEALPENGKVILAECVLPE 300          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.896e-48
Identity = 101/221 (45.70%), Postives = 130/221 (58.82%), Query Frame = 2
Query:    2 RLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 655
            RLL SY V     E R+   ER+YS   + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G     N +  + M   SV     +LD Y GF+GV  LVDVGG  G  L  I  +HP I  G+NFDLP V++EAP  PGV H+GGDMF S+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP
Sbjct:   84 RLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHI-SGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLP 302          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.352e-48
Identity = 98/223 (43.95%), Postives = 138/223 (61.88%), Query Frame = 2
Query:    2 RLLTSYGVFS-EHREFGG---ERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 658
            RLLTSY V +  +R+  G   ER Y L  + K L  + +G+S A   L +    LM +W  + +A+LD  I PF K +G  A+ Y+G  P  N +    MS  S   M  +L+ Y GF+G+  LVDVGG  G  L+MI+ K+P + +GINFDLP V+ +APS PG+ H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY++LP  GK+I  E +LP+
Sbjct:   80 RLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGI-PFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNL-KGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPE 300          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.352e-48
Identity = 98/222 (44.14%), Postives = 136/222 (61.26%), Query Frame = 2
Query:    2 RLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 655
            RLL SY V +    +  E   ER Y L  + K LV + +G+S AP  L       + +W  + +A+L+  I PF K HG  A+ Y G  P  N +  +AMS  S   M  +L+ Y+GF+G+K +VDVGG  G  L MI+ K+P I +GINFDLP V+ +APS PGV H+GGDMF +IP  DA+FMKW+   W+D+ C  +++NCY ALP  G++I  E +LP
Sbjct:   64 RLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGI-PFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNGRVIVAEYILP 283          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.861e-47
Identity = 96/207 (46.38%), Postives = 129/207 (62.32%), Query Frame = 2
Query:   53 ERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE---PVLPDDS 664
            +R Y L  + K LV + +G+S +   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+K LVDVGG  G  +  I+ K+P I +GINFDLP V+ +APS PGV H+GGDMF SIP ADA+FMKW+   W+D+ C   ++NCY+ALP  GK+I  E   PV PD S
Sbjct:  103 QRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSS 307          
BLAST of FC875697 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.861e-47
Identity = 91/202 (45.05%), Postives = 130/202 (64.36%), Query Frame = 2
Query:   53 ERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 658
            ER YSL  + K L  +A+G+S AP +L +    LM +W  + +AVLD  + PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF+G+  +VDVGG  G  + MI+ K+P I +GINFDL  V+ +AP+ PGV H+G DMF S+P ADAIFMKW+   W+D+ C   ++NCY+ALPA GK++  E +LP+
Sbjct:   99 ERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGV-PFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSI-KGINFDLSHVIEDAPAYPGVEHVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPE 298          
The following BLAST results are available for this feature:
BLAST of FC875697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
COMT1_SACOF1.165e-4945.65Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_COFCA1.165e-4945.74Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_OCIBA3.391e-4945.29Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_CATRO9.866e-4945.18Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT2_OCIBA1.683e-4845.29Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_MAIZE4.896e-4845.70Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ARATH8.352e-4843.95Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_EUCGL8.352e-4844.14Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_MEDSA1.861e-4746.38Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CAPAN1.861e-4745.05Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]

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Properties
Property NameValue
Genbank descriptionC31401G11EF CTVClemen1 Citrus clementina cDNA clone C31401G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875697 ID=FC875697; Name=FC875697; organism=Citrus clementina; type=EST; length=688bp
CCGCTTGCTCACCAGCTACGGCGTGTTCTCGGAGCATCGCGAGTTTGGAG
GCGAAAGGAAGTACAGCCTCACCGAGATCGGGAAATCCCTCGTTACTGAT
GCCGAGGGTCTATCGTACGCGCCCTACGTGCTCCAGCATCACCAGGACGC
GCTTATGAGCGCGTGGCCTTTGGTGCACGAGGCCGTTCTGGACCCAACTA
TTGAGCCATTTGTGAAAGTCCATGGCGAGCCGGCATATAGTTATTATGGG
AAGAAGCCTGAAATGAACGGCTTGATGCGAAAAGCCATGTCGGGAGTGTC
CGTGCCGTTCATGACGTCCGTTTTGGACGGTTACGATGGGTTCAAAGGTG
TGAAGCGATTGGTTGATGTGGGTGGGAGTGCAGGTGATTGCCTGAGGATG
ATATTACAGAAACATCCTTTTATATGTGAAGGGATCAATTTTGATTTGCC
TGAGGTTGTTGCCGAAGCTCCAAGTATCCCTGGAGTGACCCATATTGGTG
GGGACATGTTTAAGTCCATTCCTGCCGCTGATGCTATCTTTATGAAGTGG
GTTTTAACTACATGGACTGACGATGAATGCAAGCTGATAATGGAGAACTG
TTACAAGGCTCTTCCGGCAGGAGGAAAACTGATTGCTTGTGAGCCCGTGC
TGCCTGATGATTCAACGAGAGTCAGAGACGCGTGCTCT
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