FC876216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5A_ARATH (COP9 signalosome complex subunit 5a OS=Arabidopsis thaliana GN=CSN5A PE=1 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 2.818e-95 Identity = 170/213 (79.81%), Postives = 187/213 (87.79%), Query Frame = 1 Query: 115 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPERIQPPDEPISEYQTIP 753 S+IA+KTWELEN+I+++++P S SD IF+YD+ +QT+FQQEKPW NDPHYFKRVKISALALLKMVVHARSGGTIE+MGLMQGKTDGD IIVMDAFALPVEGTETRVNAQ DAYEYMV+YSQTNK AGRLEN VGWYHSHPGYGCWLSGIDVS LNQQ QEPFLAVVIDPTRTVSAGK GAFRTY + +PPDEP+SEYQTIP Sbjct: 6 STIARKTWELENSILTVDSPD-------STSDNIFYYDDTSQTRFQQEKPWENDPHYFKRVKISALALLKMVVHARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVNAQDDAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTRTVSAGKVEIGAFRTYSKGYKPPDEPVSEYQTIP 211
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5B_ARATH (COP9 signalosome complex subunit 5b OS=Arabidopsis thaliana GN=CSN5B PE=1 SV=2) HSP 1 Score: 335.109 bits (858), Expect = 2.469e-91 Identity = 167/213 (78.40%), Postives = 186/213 (87.32%), Query Frame = 1 Query: 115 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPERIQPPDEPISEYQTIP 753 S+IA+KTWELENNI+ +E PT+S ASD+IF YD+ +Q K QQEKPW +DP+YFKRV ISALALLKMVVHARSGGTIE+MGLMQGKT+GD IIVMDAFALPVEGTETRVNAQ+DAYEYMV+YSQT+K AGRLEN VGWYHSHPGYGCWLSGIDVS MLNQQ+QEPFLAVVIDPTRTVSAGK GAFRTYPE + D+ +SEYQTIP Sbjct: 6 SAIARKTWELENNILPVE--PTDS-----ASDSIFHYDDASQAKIQQEKPWASDPNYFKRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGHKISDDHVSEYQTIP 211
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_XENTR (COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5 PE=2 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 3.131e-78 Identity = 143/213 (67.14%), Postives = 164/213 (77.00%), Query Frame = 1 Query: 115 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPERIQPPDEPISEYQTIP 753 SS+AQKTWEL NN+ +++ D I+ YD+ Q + KPW D HYFK K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVS MLNQQFQEPF+AVVIDPTRT+SAGK GAFRTYP+ +PPDE SEYQTIP Sbjct: 6 SSVAQKTWELSNNMQEVQS-----------IDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIP 207
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_XENLA (COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 3.131e-78 Identity = 143/213 (67.14%), Postives = 164/213 (77.00%), Query Frame = 1 Query: 115 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPERIQPPDEPISEYQTIP 753 SS+AQKTWEL NN+ +++ D I+ YD+ Q + KPW D HYFK K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVS MLNQQFQEPF+AVVIDPTRT+SAGK GAFRTYP+ +PPDE SEYQTIP Sbjct: 4 SSVAQKTWELSNNMQEVQS-----------IDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIP 205
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_MOUSE (COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1 SV=3) HSP 1 Score: 289.271 bits (739), Expect = 1.554e-77 Identity = 143/213 (67.14%), Postives = 162/213 (76.06%), Query Frame = 1 Query: 115 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPERIQPPDEPISEYQTIP 753 S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVS MLNQQFQEPF+AVVIDPTRT+SAGK GAFRTYP+ +PPDE SEYQTIP Sbjct: 6 SGMAQKTWELANNM-----------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIP 207
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_HUMAN (COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1 SV=4) HSP 1 Score: 289.271 bits (739), Expect = 1.554e-77 Identity = 143/213 (67.14%), Postives = 162/213 (76.06%), Query Frame = 1 Query: 115 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPERIQPPDEPISEYQTIP 753 S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVS MLNQQFQEPF+AVVIDPTRT+SAGK GAFRTYP+ +PPDE SEYQTIP Sbjct: 6 SGMAQKTWELANNM-----------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIP 207
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_DROME (COP9 signalosome complex subunit 5 OS=Drosophila melanogaster GN=CSN5 PE=1 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.650e-77 Identity = 142/215 (66.05%), Postives = 164/215 (76.28%), Query Frame = 1 Query: 109 MDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPERIQPPDEPISEYQTIP 753 MDS AQKTWELENNI ++ + D IF YD Q + KPW DPH+FK +KISALALLKMV+HARSGGT+EVMGLM GK + + +IVMDAFALPVEGTETRVNAQA AYEYM Y + K+ GR+E+AVGWYHSHPGYGCWLSGIDVS MLNQ +QEPF+A+V+DP RTVSAGK GAFRTYP+ +PP+E SEYQTIP Sbjct: 1 MDSDAAQKTWELENNIQTLPS-----------CDEIFRYDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYPKGYKPPNEEPSEYQTIP 204
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_DANRE (COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.650e-77 Identity = 143/213 (67.14%), Postives = 162/213 (76.06%), Query Frame = 1 Query: 115 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPERIQPPDEPISEYQTIP 753 SSIA KTWEL +NS + + D I+ YD+ Q + KPW D HYFK K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVS MLNQQFQEPF+AVVIDPTRT+SAGK GAFRTYP+ +PPDE SEYQTIP Sbjct: 4 SSIAMKTWEL-----------SNSMQEVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKLSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIP 205
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_DICDI (COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum GN=csn5 PE=1 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 6.755e-73 Identity = 132/210 (62.86%), Postives = 160/210 (76.19%), Query Frame = 1 Query: 124 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPERIQPPDEPISEYQTIP 753 A KT+ELENNI +++ D +F YD +F Q KPW DPHYFK VKISA+ALLKMV+HARSGG +EVMG++ GK + + +I+MD+FALPVEGTETRVNAQ +AYEYMV+Y + KQ GRLENA+GWYHSHPGYGCWLSGIDV +NQQ+ EP+L +VIDPTRTVSAGK GAFRTYP+ +PP+E SEYQ+IP Sbjct: 9 ALKTFELENNIQTID------------HDQLFKYDPQQYQQFLQSKPWSKDPHYFKHVKISAIALLKMVMHARSGGKLEVMGMLMGKVENNTMIIMDSFALPVEGTETRVNAQVEAYEYMVEYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDPTRTVSAGKVEIGAFRTYPQGYKPPNEGPSEYQSIP 206
BLAST of FC876216 vs. ExPASy Swiss-Prot
Match: CSN5_CAEEL (COP9 signalosome complex subunit 5 OS=Caenorhabditis elegans GN=csn-5 PE=1 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 4.098e-70 Identity = 126/217 (58.06%), Postives = 157/217 (72.35%), Query Frame = 1 Query: 103 VSMDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSISMLNQQFQEPFLAVVIDPTRTVSAGKS*DGAFRTYPERIQPPDEPISEYQTIP 753 V SS+ Q+ WE ENN+ ++ D+IF Y+ Q + + KPW DPHYFK++KISA+ALLKM +HA+ GG +E+MGL+QG+ D ++ I++D FALPVEGTETRVNAQA AYEYM YS+ GR E VGWYHSHPGYGCWLSGIDVS LNQ+FQEP++A+VIDP RT+SAGK GAFRTYPE +PPD+ SEYQ+IP Sbjct: 6 VKPSSSVPQRNWEKENNVQNV--------------DSIFEYNNKQQVEIRNAKPWDKDPHYFKQIKISAIALLKMTMHAKRGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQAQAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLRTMSAGKVDIGAFRTYPEGYRPPDDVPSEYQSIP 208 The following BLAST results are available for this feature:
BLAST of FC876216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876216 ID=FC876216; Name=FC876216; organism=Citrus clementina; type=EST; length=754bpback to top |