FC876223

Overview
NameFC876223
Unique NameFC876223
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC876223 vs. ExPASy Swiss-Prot
Match: GOGC2_ARATH (Golgin candidate 2 OS=Arabidopsis thaliana GN=GC2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.814e-18
Identity = 61/152 (40.13%), Postives = 79/152 (51.97%), Query Frame = 1 
Query:  205 MAHWISNKLKVAETFLQQIDQQAAESLGKGDKPRSEDPQID-GPSKSSGSVSLKDQLKKRTQEINDY-RGKLQSDPNVKNVY-------------NRNNSFTSSKETKHKSTLTDSDWTELLGTPDKGLSLGNVRKDERRRQGGTLGNRNRK 615
            MA+WIS+KLK AET LQQ+DQQAA+SL K +K  + D   +  P   S  VSLKDQL+K+T E +D   G  ++    K  Y             +   S  S   T+  + LTD+DWTELL TP++  S         R  GGT   R  K
Sbjct:    1 MANWISSKLKAAETILQQLDQQAADSLRKDEKSETHDEVFETSPKSGSSPVSLKDQLRKKTYEGSDSGSGSQRNSTEQKPSYLSSSKKVRKPDQSHERTSAPSQSLTQDNTKLTDNDWTELLSTPNQRTSTST-----SRSPGGTSAIRGLK 147
The following BLAST results are available for this feature:
BLAST of FC876223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GOGC2_ARATH7.814e-1840.13Golgin candidate 2 OS=Arabidopsis thaliana GN=GC2 ... [more]
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Properties
Property NameValue
Genbank descriptionC32002A01EF DevOvary1 Citrus clementina cDNA clone C32002A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876223 ID=FC876223; Name=FC876223; organism=Citrus clementina; type=EST; length=740bp
GAAAGTTGAAACGACACCGTTACTTTGGCACTTAGTGCTCTGCAAATCTG
CATCCTCCGCTTCCACCTTCGTCATCTCATTGTTTGTTCGTCGAGCGAAA
GCAAAGAGAAAATATAAAAGATCATTGTTGATTATACTTCATTAAAATGT
GTTAAATAAGTAACTGTATTTGATTTGAAAATTAAAAAAAAATCAGTAAT
TACAATGGCGCATTGGATCTCCAACAAACTCAAAGTCGCTGAAACTTTCC
TTCAACAGATCGATCAACAAGCGGCAGAATCGCTTGGCAAGGGCGATAAG
CCTCGATCTGAAGATCCTCAAATCGATGGCCCATCAAAGAGCAGTGGCTC
TGTTTCATTAAAGGATCAATTGAAGAAGAGAACACAAGAAATTAATGATT
ACAGAGGCAAATTGCAGAGTGACCCTAATGTTAAAAACGTTTATAATAGA
AATAATTCATTCACAAGTTCGAAAGAAACTAAACATAAGTCTACGCTTAC
TGATAGTGACTGGACCGAATTGCTTGGCACGCCTGATAAGGGTCTGAGTT
TGGGAAATGTTAGGAAGGATGAGAGAAGGAGGCAAGGGGGCACTTTGGGT
AATAGAAATAGGAAGATTAATAAAAATAGCAGCTTGATTAAATCTGGATG
GAGTAAGGTAAATGGTGGAAAATAGCCTAGTGATGGGGACGAGTCTGGTT
CTTCAGGGAGGTCGTCAAGCGTTGAATTTGCAAATGATGG
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