FC876315

Overview
NameFC876315
Unique NameFC876315
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10332 contig Ccv1_Contig10332:1..695. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_PRUAR (Calreticulin OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 3.879e-103
Identity = 168/186 (90.32%), Postives = 179/186 (96.24%), Query Frame = 1
Query:  103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660
            VFFEERF+DGW+ RWVTS+WKKDEN AGEWNYT+GKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGY+KLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAIL YN TN LIKK+VPCETDQLTHVYTFI+RPDA YSILIDN+EKQ+GSLYSDWDLLP +
Sbjct:   26 VFFEERFEDGWDKRWVTSEWKKDENLAGEWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYIKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILNYNNTNNLIKKDVPCETDQLTHVYTFIIRPDATYSILIDNLEKQTGSLYSDWDLLPAK 211          

HSP 2 Score: 26.1794 bits (56), Expect = 3.879e-103
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            P+K I DP+AKKPE
Sbjct:  209 PAKKIKDPEAKKPE 222          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_RICCO (Calreticulin OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 3.879e-103
Identity = 169/186 (90.86%), Postives = 177/186 (95.16%), Query Frame = 1
Query:  103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660
            VFFEERF+DGWE+RWV SDWKKDENTAGEWNYT+GKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS   DQKKFGGDTPYSIMFGPDICGYSTKKVHAIL YN TN LIKKEVPCETDQLTHVYT ++RPDA YSILIDNVEKQ+GSLY+DWDLLPP+
Sbjct:   22 VFFEERFEDGWENRWVKSDWKKDENTAGEWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSSSTDQKKFGGDTPYSIMFGPDICGYSTKKVHAILNYNDTNHLIKKEVPCETDQLTHVYTLVIRPDATYSILIDNVEKQTGSLYTDWDLLPPK 207          

HSP 2 Score: 25.409 bits (54), Expect = 3.879e-103
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            P K I DP+AKKPE
Sbjct:  205 PPKKIKDPEAKKPE 218          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_NICPL (Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 PE=2 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 8.615e-103
Identity = 171/186 (91.94%), Postives = 177/186 (95.16%), Query Frame = 1
Query:  103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660
            VFFEE F+DGWESRWV S+WKKDEN AGEWN+T+GKWNGD NDKGIQTSEDYRFYAISAEFPEFSNK K LVFQFSVKHEQKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYN TN LIKKEVPCETDQLTHVYTFILRPDA YSILIDNVEKQSGSLYSDWDLLPP+
Sbjct:   29 VFFEESFNDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDANDKGIQTSEDYRFYAISAEFPEFSNKGKNLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNDTNHLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPK 214          

HSP 2 Score: 26.9498 bits (58), Expect = 8.615e-103
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            P KTI DP AKKPE
Sbjct:  212 PPKTIKDPSAKKPE 225          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR2_ARATH (Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=1 SV=3)

HSP 1 Score: 365.54 bits (937), Expect = 3.566e-101
Identity = 168/186 (90.32%), Postives = 177/186 (95.16%), Query Frame = 1
Query:  103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660
            V FEERFDDGWE+RWV S+WKKD+NTAGEW +TAG W+GD NDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYN  N LIKK+VPCETDQLTHVYTFILRPDA YSILIDNVEKQ+GSLYSDWDLLPP+
Sbjct:   24 VIFEERFDDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNEANHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPK 209          

HSP 2 Score: 24.6386 bits (52), Expect = 3.566e-101
Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            P K I DP AKKPE
Sbjct:  207 PPKKIKDPSAKKPE 220          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR1_ARATH (Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=1 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.348e-100
Identity = 172/210 (81.90%), Postives = 181/210 (86.19%), Query Frame = 1
Query:   31 MAKLNPXXXXXXXXXXXXXXXXXHVFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660
            MAKLNP                  V FEE+F+DGWE RWV SDWKKD+NTAGEW +TAG W+GD NDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS +VDQ KFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTN LIKKEVPCETDQLTHVYTF+LRPDA YSILIDNVEKQ+GSLYSDWDLLP +
Sbjct:    1 MAKLNPKFISLILFALVVIVSA-EVIFEEKFEDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSDDVDQTKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNHLIKKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYSDWDLLPAK 209          

HSP 2 Score: 25.409 bits (54), Expect = 1.348e-100
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            P+K I DP AKKPE
Sbjct:  207 PAKKIKDPSAKKPE 220          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_BETVU (Calreticulin OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 2.295e-100
Identity = 166/186 (89.25%), Postives = 174/186 (93.55%), Query Frame = 1
Query:  103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660
            VFFEERF+DGWE RWV S+WKKDE+ AGEWNYT+GKWNGD NDKGIQTSEDYRFYAISAEFPEFSNKD TLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAI  YN TN LIKK+VPCETDQLTHVYTFILRPDA YSILIDN EKQ+GSLY+DWDLLP +
Sbjct:   27 VFFEERFEDGWEKRWVKSEWKKDESMAGEWNYTSGKWNGDANDKGIQTSEDYRFYAISAEFPEFSNKDNTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAIFNYNDTNHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNQEKQTGSLYTDWDLLPAK 212          

HSP 2 Score: 26.1794 bits (56), Expect = 2.295e-100
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            P+K I DP+AKKPE
Sbjct:  210 PAKKIKDPEAKKPE 223          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_BERST (Calreticulin OS=Berberis stolonifera PE=2 SV=1)

HSP 1 Score: 360.147 bits (923), Expect = 8.674e-100
Identity = 165/186 (88.71%), Postives = 176/186 (94.62%), Query Frame = 1
Query:  103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660
            VFFEERF+DGWES+WV SDWK+DEN AGEWN+T+GKWNGD NDKGIQTSEDYRFYAISA FPEFSNK KTLVFQFSVKHEQKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILT   TN LIKK+VPCETDQLTHVYTFILRPDA YSILIDNVEKQSGS+Y+DWD+LPP+
Sbjct:   24 VFFEERFEDGWESKWVKSDWKRDENMAGEWNFTSGKWNGDANDKGIQTSEDYRFYAISAAFPEFSNKGKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTKGETNHLIKKDVPCETDQLTHVYTFILRPDASYSILIDNVEKQSGSVYTDWDILPPK 209          

HSP 2 Score: 25.409 bits (54), Expect = 8.674e-100
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            P K I DP+AKKPE
Sbjct:  207 PPKQIKDPEAKKPE 220          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_ORYSJ (Calreticulin OS=Oryza sativa subsp. japonica GN=Os07g0246200 PE=1 SV=2)

HSP 1 Score: 344.354 bits (882), Expect = 4.709e-95
Identity = 154/186 (82.80%), Postives = 170/186 (91.40%), Query Frame = 1
Query:  103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660
            VFF+E+F+DGWESRWV S+WKKDEN AGEWN+T+GKWNGDP DKGIQTSEDYRFYAISAE+PEFSNKDKTLV QFSVKHEQKLDCGGGY+KLL G+VDQKKFGGDTPYSIMFGPDICGYSTKKVH I T N  N LIKK+VPCETDQL+HVYT I+ PDA Y+ILIDNVEKQSGS+Y  WD+LPP+
Sbjct:   31 VFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPEDKGIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEHWDILPPK 216          

HSP 2 Score: 25.409 bits (54), Expect = 4.709e-95
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            P K I DP+AKKPE
Sbjct:  214 PPKQIKDPEAKKPE 227          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_MAIZE (Calreticulin OS=Zea mays GN=CRT PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.053e-88
Identity = 146/186 (78.49%), Postives = 164/186 (88.17%), Query Frame = 1
Query:  103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660
            VFF+E+F+DGWESRWV S+WKKDEN AGEWN+T+GKWNGD  DKGIQTSEDYRFYAISAE+PEFSNKDKTLV QFSVKHEQKLDCGGGY+KLL G+VDQK  GGDT YSI+  PDI  YSTKKVH ILT +G N LIKK+VPC+TDQLTHVYTFI+RPDA YSILIDN EK +GS+Y  WD+LPP+
Sbjct:   27 VFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDAEDKGIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKTLGGDTSYSIISRPDISRYSTKKVHTILTKDGKNHLIKKDVPCQTDQLTHVYTFIIRPDATYSILIDNEEKHTGSIYEHWDILPPK 212          

HSP 2 Score: 25.409 bits (54), Expect = 3.053e-88
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            P K I DP+AKKPE
Sbjct:  210 PPKKIKDPEAKKPE 223          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR3_ARATH (Calreticulin-3 OS=Arabidopsis thaliana GN=CRT3 PE=2 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 9.014e-74
Identity = 121/190 (63.68%), Postives = 156/190 (82.11%), Query Frame = 1
Query:  103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPRPSRI 672
            +F EE F+ GW+SRWV SDWK++E  AG + +TAGKW GDP++KGIQT  D + YAISA+ PEFSNK++TLV Q+SVK EQ ++CGG Y+KLLSG V+QK+FGGDTPYS+MFGPDICG  TKK+H I++Y G N  IKK++ CETD+L H YTFILRPDA YS+L+DN E++ GS+Y+DWD+LPPR  ++
Sbjct:   30 IFLEEHFEGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDPDNKGIQTYNDAKHYAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGPDICGTQTKKLHVIVSYQGQNYPIKKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFGSMYTDWDILPPRKIKV 219          
The following BLAST results are available for this feature:
BLAST of FC876315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CALR_PRUAR3.879e-10390.32Calreticulin OS=Prunus armeniaca PE=2 SV=1[more]
CALR_RICCO3.879e-10390.86Calreticulin OS=Ricinus communis PE=2 SV=1[more]
CALR_NICPL8.615e-10391.94Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 ... [more]
CALR2_ARATH3.566e-10190.32Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=... [more]
CALR1_ARATH1.348e-10081.90Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=... [more]
CALR_BETVU2.295e-10089.25Calreticulin OS=Beta vulgaris PE=2 SV=1[more]
CALR_BERST8.674e-10088.71Calreticulin OS=Berberis stolonifera PE=2 SV=1[more]
CALR_ORYSJ4.709e-9582.80Calreticulin OS=Oryza sativa subsp. japonica GN=Os... [more]
CALR_MAIZE3.053e-8878.49Calreticulin OS=Zea mays GN=CRT PE=2 SV=1[more]
CALR3_ARATH9.014e-7463.68Calreticulin-3 OS=Arabidopsis thaliana GN=CRT3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32003C07EF DevOvary1 Citrus clementina cDNA clone C32003C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876315 ID=FC876315; Name=FC876315; organism=Citrus clementina; type=EST; length=694bp
GGAGAGCACTTCCTCTCTCTCGCTCTAAAAATGGCGAAATTAAACCCTAG
CTTTCTCTCTCTAACTCTCCTCACTATCTTCCTGACAATTGCCTCTGCTC
ACGTCTTCTTCGAAGAACGCTTTGACGATGGATGGGAAAGCCGGTGGGTT
ACATCTGATTGGAAGAAAGATGAGAACACGGCTGGAGAATGGAACTACAC
TGCTGGGAAATGGAATGGGGACCCGAATGATAAAGGTATTCAAACTAGTG
AAGACTACAGGTTCTATGCTATTTCAGCTGAATTCCCTGAATTCAGCAAC
AAGGACAAGACACTCGTGTTCCAGTTTTCTGTTAAGCACGAACAGAAGCT
TGACTGTGGTGGTGGCTACATGAAGTTGCTTAGTGGCGAAGTTGATCAGA
AGAAATTTGGTGGTGATACCCCTTACAGTATCATGTTTGGACCAGATATC
TGTGGTTATAGCACTAAGAAAGTGCATGCCATTCTTACCTACAATGGAAC
AAACAAATTGATCAAGAAGGAAGTACCATGTGAGACTGACCAACTCACTC
ATGTTTATACTTTCATCCTCCGTCCAGATGCTCCTTACAGCATCCTCATT
GACAATGTGGAGAAACAATCTGGTAGCTTGTACTCTGATTGGGATCTCCT
CCCTCCAAGACCATCNAGGATCCTGACGCCAAGAAACCTGAAGA
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