FC876315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_PRUAR (Calreticulin OS=Prunus armeniaca PE=2 SV=1) HSP 1 Score: 370.548 bits (950), Expect = 3.879e-103 Identity = 168/186 (90.32%), Postives = 179/186 (96.24%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 VFFEERF+DGW+ RWVTS+WKKDEN AGEWNYT+GKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGY+KLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAIL YN TN LIKK+VPCETDQLTHVYTFI+RPDA YSILIDN+EKQ+GSLYSDWDLLP + Sbjct: 26 VFFEERFEDGWDKRWVTSEWKKDENLAGEWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYIKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILNYNNTNNLIKKDVPCETDQLTHVYTFIIRPDATYSILIDNLEKQTGSLYSDWDLLPAK 211 HSP 2 Score: 26.1794 bits (56), Expect = 3.879e-103 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P+K I DP+AKKPE Sbjct: 209 PAKKIKDPEAKKPE 222
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_RICCO (Calreticulin OS=Ricinus communis PE=2 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 3.879e-103 Identity = 169/186 (90.86%), Postives = 177/186 (95.16%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 VFFEERF+DGWE+RWV SDWKKDENTAGEWNYT+GKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS DQKKFGGDTPYSIMFGPDICGYSTKKVHAIL YN TN LIKKEVPCETDQLTHVYT ++RPDA YSILIDNVEKQ+GSLY+DWDLLPP+ Sbjct: 22 VFFEERFEDGWENRWVKSDWKKDENTAGEWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSSSTDQKKFGGDTPYSIMFGPDICGYSTKKVHAILNYNDTNHLIKKEVPCETDQLTHVYTLVIRPDATYSILIDNVEKQTGSLYTDWDLLPPK 207 HSP 2 Score: 25.409 bits (54), Expect = 3.879e-103 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P K I DP+AKKPE Sbjct: 205 PPKKIKDPEAKKPE 218
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_NICPL (Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 PE=2 SV=1) HSP 1 Score: 368.622 bits (945), Expect = 8.615e-103 Identity = 171/186 (91.94%), Postives = 177/186 (95.16%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 VFFEE F+DGWESRWV S+WKKDEN AGEWN+T+GKWNGD NDKGIQTSEDYRFYAISAEFPEFSNK K LVFQFSVKHEQKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYN TN LIKKEVPCETDQLTHVYTFILRPDA YSILIDNVEKQSGSLYSDWDLLPP+ Sbjct: 29 VFFEESFNDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDANDKGIQTSEDYRFYAISAEFPEFSNKGKNLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNDTNHLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPK 214 HSP 2 Score: 26.9498 bits (58), Expect = 8.615e-103 Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P KTI DP AKKPE Sbjct: 212 PPKTIKDPSAKKPE 225
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR2_ARATH (Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=1 SV=3) HSP 1 Score: 365.54 bits (937), Expect = 3.566e-101 Identity = 168/186 (90.32%), Postives = 177/186 (95.16%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 V FEERFDDGWE+RWV S+WKKD+NTAGEW +TAG W+GD NDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYN N LIKK+VPCETDQLTHVYTFILRPDA YSILIDNVEKQ+GSLYSDWDLLPP+ Sbjct: 24 VIFEERFDDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNEANHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPK 209 HSP 2 Score: 24.6386 bits (52), Expect = 3.566e-101 Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P K I DP AKKPE Sbjct: 207 PPKKIKDPSAKKPE 220
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR1_ARATH (Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=1 SV=1) HSP 1 Score: 362.844 bits (930), Expect = 1.348e-100 Identity = 172/210 (81.90%), Postives = 181/210 (86.19%), Query Frame = 1 Query: 31 MAKLNPXXXXXXXXXXXXXXXXXHVFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 MAKLNP V FEE+F+DGWE RWV SDWKKD+NTAGEW +TAG W+GD NDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS +VDQ KFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTN LIKKEVPCETDQLTHVYTF+LRPDA YSILIDNVEKQ+GSLYSDWDLLP + Sbjct: 1 MAKLNPKFISLILFALVVIVSA-EVIFEEKFEDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSDDVDQTKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNHLIKKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYSDWDLLPAK 209 HSP 2 Score: 25.409 bits (54), Expect = 1.348e-100 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P+K I DP AKKPE Sbjct: 207 PAKKIKDPSAKKPE 220
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_BETVU (Calreticulin OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 361.303 bits (926), Expect = 2.295e-100 Identity = 166/186 (89.25%), Postives = 174/186 (93.55%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 VFFEERF+DGWE RWV S+WKKDE+ AGEWNYT+GKWNGD NDKGIQTSEDYRFYAISAEFPEFSNKD TLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAI YN TN LIKK+VPCETDQLTHVYTFILRPDA YSILIDN EKQ+GSLY+DWDLLP + Sbjct: 27 VFFEERFEDGWEKRWVKSEWKKDESMAGEWNYTSGKWNGDANDKGIQTSEDYRFYAISAEFPEFSNKDNTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAIFNYNDTNHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNQEKQTGSLYTDWDLLPAK 212 HSP 2 Score: 26.1794 bits (56), Expect = 2.295e-100 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P+K I DP+AKKPE Sbjct: 210 PAKKIKDPEAKKPE 223
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_BERST (Calreticulin OS=Berberis stolonifera PE=2 SV=1) HSP 1 Score: 360.147 bits (923), Expect = 8.674e-100 Identity = 165/186 (88.71%), Postives = 176/186 (94.62%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 VFFEERF+DGWES+WV SDWK+DEN AGEWN+T+GKWNGD NDKGIQTSEDYRFYAISA FPEFSNK KTLVFQFSVKHEQKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILT TN LIKK+VPCETDQLTHVYTFILRPDA YSILIDNVEKQSGS+Y+DWD+LPP+ Sbjct: 24 VFFEERFEDGWESKWVKSDWKRDENMAGEWNFTSGKWNGDANDKGIQTSEDYRFYAISAAFPEFSNKGKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTKGETNHLIKKDVPCETDQLTHVYTFILRPDASYSILIDNVEKQSGSVYTDWDILPPK 209 HSP 2 Score: 25.409 bits (54), Expect = 8.674e-100 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P K I DP+AKKPE Sbjct: 207 PPKQIKDPEAKKPE 220
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_ORYSJ (Calreticulin OS=Oryza sativa subsp. japonica GN=Os07g0246200 PE=1 SV=2) HSP 1 Score: 344.354 bits (882), Expect = 4.709e-95 Identity = 154/186 (82.80%), Postives = 170/186 (91.40%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 VFF+E+F+DGWESRWV S+WKKDEN AGEWN+T+GKWNGDP DKGIQTSEDYRFYAISAE+PEFSNKDKTLV QFSVKHEQKLDCGGGY+KLL G+VDQKKFGGDTPYSIMFGPDICGYSTKKVH I T N N LIKK+VPCETDQL+HVYT I+ PDA Y+ILIDNVEKQSGS+Y WD+LPP+ Sbjct: 31 VFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPEDKGIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEHWDILPPK 216 HSP 2 Score: 25.409 bits (54), Expect = 4.709e-95 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P K I DP+AKKPE Sbjct: 214 PPKQIKDPEAKKPE 227
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_MAIZE (Calreticulin OS=Zea mays GN=CRT PE=2 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 3.053e-88 Identity = 146/186 (78.49%), Postives = 164/186 (88.17%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 VFF+E+F+DGWESRWV S+WKKDEN AGEWN+T+GKWNGD DKGIQTSEDYRFYAISAE+PEFSNKDKTLV QFSVKHEQKLDCGGGY+KLL G+VDQK GGDT YSI+ PDI YSTKKVH ILT +G N LIKK+VPC+TDQLTHVYTFI+RPDA YSILIDN EK +GS+Y WD+LPP+ Sbjct: 27 VFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDAEDKGIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKTLGGDTSYSIISRPDISRYSTKKVHTILTKDGKNHLIKKDVPCQTDQLTHVYTFIIRPDATYSILIDNEEKHTGSIYEHWDILPPK 212 HSP 2 Score: 25.409 bits (54), Expect = 3.053e-88 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P K I DP+AKKPE Sbjct: 210 PPKKIKDPEAKKPE 223
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR3_ARATH (Calreticulin-3 OS=Arabidopsis thaliana GN=CRT3 PE=2 SV=2) HSP 1 Score: 276.559 bits (706), Expect = 9.014e-74 Identity = 121/190 (63.68%), Postives = 156/190 (82.11%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPRPSRI 672 +F EE F+ GW+SRWV SDWK++E AG + +TAGKW GDP++KGIQT D + YAISA+ PEFSNK++TLV Q+SVK EQ ++CGG Y+KLLSG V+QK+FGGDTPYS+MFGPDICG TKK+H I++Y G N IKK++ CETD+L H YTFILRPDA YS+L+DN E++ GS+Y+DWD+LPPR ++ Sbjct: 30 IFLEEHFEGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDPDNKGIQTYNDAKHYAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGPDICGTQTKKLHVIVSYQGQNYPIKKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFGSMYTDWDILPPRKIKV 219 The following BLAST results are available for this feature:
BLAST of FC876315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876315 ID=FC876315; Name=FC876315; organism=Citrus clementina; type=EST; length=694bpback to top |