FC876325

Overview
NameFC876325
Unique NameFC876325
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11268 contig Ccv1_Contig11268:78..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_PARUW (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Protochlamydia amoebophila (strain UWE25) GN=gpmA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.364e-37
Identity = 70/114 (61.40%), Postives = 91/114 (79.82%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYGE 676
            LIL+RHG+S WN  NLFTG VD+PL+ KG+EEAIEAGK+I N P+D+I+TS+LIRAQMTAMLAM+ H   KVP+I+H    +   W+ I+S ++  Q+IPV+ AW+LNERMYGE
Sbjct:    4 LILMRHGQSQWNLANLFTGWVDIPLSFKGIEEAIEAGKQIKNYPIDLIFTSSLIRAQMTAMLAMSVHTSGKVPVILHTGEGRLEEWASIYSSESQSQTIPVIRAWELNERMYGE 117          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_CHLPN (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia pneumoniae GN=gpmA PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.957e-31
Identity = 62/116 (53.45%), Postives = 88/116 (75.86%), Query Frame = 2
Query:  329 AALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYGE 676
            A LIL+RHG+S+WNEKNLF+G VD+PL+++G+EEA  AG+ I N+P+D I+TS L+R+ MTA+LAMT H  +K+P I+H E  +A+  S+I+S +     IP+  +  LNERMYGE
Sbjct:    2 ALLILLRHGQSVWNEKNLFSGWVDIPLSQQGIEEAFSAGRAIQNLPIDCIFTSTLVRSLMTALLAMTNHHSKKIPYIVH-EDPKAKEMSRIYSAEEENNMIPLYQSSALNERMYGE 116          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_CHLCV (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydophila caviae GN=gpmA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.606e-30
Identity = 64/116 (55.17%), Postives = 92/116 (79.31%), Query Frame = 2
Query:  329 AALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYGE 676
            A LIL+RHG+S+WNEKNLFTG VD+PL+++G++EAI AG+ I ++P+D I+TS+L+R+ MTA+LAMT H  +K+P I+H++ EQ +  S+I+S D  K  IP+  +  LNERMYGE
Sbjct:    2 AFLILLRHGKSVWNEKNLFTGWVDIPLSQQGIDEAIHAGQVIKDLPIDCIFTSSLVRSLMTALLAMTHHSSKKIPYIIHDD-EQQKLMSRIYS-DEEKSMIPLYRSSALNERMYGE 115          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_CHLMU (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia muridarum GN=gpmA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.445e-30
Identity = 61/114 (53.51%), Postives = 88/114 (77.19%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYGE 676
            LIL+RHG+S+WN+KNLFTG VD+PL+++G++EA+ AG+ I N+P+D I+TS L+R+ MTA+LAMT H  +K+P I+H   E+    S+I SE  ++Q IP+  +  LNERMYGE
Sbjct:    4 LILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEALTAGEAIKNLPIDCIFTSTLVRSLMTALLAMTNHSSKKIPYIIH---EERPDMSRIHSEKELEQMIPLFQSSALNERMYGE 114          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_CHLAB (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydophila abortus GN=gpmA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.445e-30
Identity = 63/116 (54.31%), Postives = 92/116 (79.31%), Query Frame = 2
Query:  329 AALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYGE 676
            A LIL+RHG+S+WNEKNLFTG VD+PL++KG++EA+ AG+ I ++P+D I+TS+L+R+ MTA+LAMT H  +K+P I+H++ EQ +  S+I+S D +   IP+  +  LNERMYGE
Sbjct:    2 AFLILLRHGKSVWNEKNLFTGWVDIPLSQKGIDEAMLAGEAIKDLPIDCIFTSSLVRSLMTALLAMTHHNSKKIPYIVHDDPEQ-KHMSKIYS-DEVNHMIPLYRSSALNERMYGE 115          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_CHLTB (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=gpmA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30
Identity = 62/114 (54.39%), Postives = 88/114 (77.19%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYGE 676
            LIL+RHG+S+WN+KNLFTG VD+PL+++G++EAI AG+ I ++P+D I+TS L+R+ MTA+LAMT H  +KVP I+H   E+    S+I S+  M+Q IP+  +  LNERMYGE
Sbjct:    4 LILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEAIAAGESIKHLPIDCIFTSTLVRSLMTALLAMTNHSSQKVPYIVH---EERPDMSRIHSQKEMEQMIPLFQSSALNERMYGE 114          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_CHLT2 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=gpmA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30
Identity = 62/114 (54.39%), Postives = 88/114 (77.19%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYGE 676
            LIL+RHG+S+WN+KNLFTG VD+PL+++G++EAI AG+ I ++P+D I+TS L+R+ MTA+LAMT H  +KVP I+H   E+    S+I S+  M+Q IP+  +  LNERMYGE
Sbjct:    4 LILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEAIAAGESIKHLPIDCIFTSTLVRSLMTALLAMTNHSSQKVPYIVH---EERPDMSRIHSQKEMEQMIPLFQSSALNERMYGE 114          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_CHLFF (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydophila felis (strain Fe/C-56) GN=gpmA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30
Identity = 64/116 (55.17%), Postives = 92/116 (79.31%), Query Frame = 2
Query:  329 AALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYGE 676
            A LIL+RHG+S+WNEKNLFTG VD+PL++KG++EAI AG+ I ++P+D I+TS+L+R+ MTA+LAMT H  +KVP I+H ++ Q +  S+I+SE+  +  IP+  +  LNERMYGE
Sbjct:    2 AFLILLRHGKSVWNEKNLFTGWVDIPLSQKGIDEAILAGQVIKDLPIDCIFTSSLVRSLMTALLAMTHHSSKKVPYIIH-DAPQQKQMSRIYSEEE-QHMIPLYRSSALNERMYGE 115          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_CHLTR (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia trachomatis GN=gpmA PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.881e-29
Identity = 61/114 (53.51%), Postives = 88/114 (77.19%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYGE 676
            LIL+RHG+S+WN+KNLFTG VD+PL+++G++EAI AG+ I ++P+D I+TS L+R+ +TA+LAMT H  +KVP I+H   E+    S+I S+  M+Q IP+  +  LNERMYGE
Sbjct:    4 LILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEAIAAGESIKHLPIDCIFTSTLVRSLITALLAMTNHSSQKVPYIVH---EERPDMSRIHSQKEMEQMIPLFQSSALNERMYGE 114          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_CHLTA (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=gpmA PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.881e-29
Identity = 61/114 (53.51%), Postives = 88/114 (77.19%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYGE 676
            LIL+RHG+S+WN+KNLFTG VD+PL+++G++EAI AG+ I ++P+D I+TS L+R+ +TA+LAMT H  +KVP I+H   E+    S+I S+  M+Q IP+  +  LNERMYGE
Sbjct:    4 LILLRHGQSVWNQKNLFTGWVDIPLSQQGIQEAIAAGESIKHLPIDCIFTSTLVRSLITALLAMTNHSSQKVPYIVH---EERPDMSRIHSQKEMEQMIPLFQSSALNERMYGE 114          
The following BLAST results are available for this feature:
BLAST of FC876325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
GPMA_PARUW8.364e-3761.402,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLPN8.957e-3153.452,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLCV2.606e-3055.172,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLMU4.445e-3053.512,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLAB4.445e-3054.312,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLTB9.903e-3054.392,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLT29.903e-3054.392,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLFF9.903e-3055.172,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLTR2.881e-2953.512,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_CHLTA2.881e-2953.512,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionC32003D07EF DevOvary1 Citrus clementina cDNA clone C32003D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876325 ID=FC876325; Name=FC876325; organism=Citrus clementina; type=EST; length=677bp
ATGAAAAAGATATTTCTGATGCTCATATGCTGCTTGAGTTAACACTGATT
GAATGTCTGCACAGGTATTTCACCAAGCTATGGGGACTCTCCAATCCAAT
CGACTTCTTAACACCTCTGGCACTCACCATGAACTTGGAAATATTAGGGT
GCATTTGATTCCAAAAAGTTTCAAGCTTAATATTGAATTGTCAAGAAACA
GGAATTTTAGATTTGGGAAGAAGAATTTTGGCATAATTCAGGCCACAGCT
TCTCAAACTTCAGTTATTGAATCTGCTTCATCTCCCTCAAATCACGACAC
CAGTGACTCCAAAAAGAAATCAAATGAAGCAGCTTTGATACTGGTTCGAC
ATGGTGAGTCTCTCTGGAATGAAAAGAACCTGTTTACAGGTTGTGTTGAT
GTGCCATTAACCAAGAAGGGTGTAGAAGAGGCAATTGAGGCTGGAAAGAG
AATAAGCAACATACCTGTCGACATGATATATACATCAGCACTAATTCGCG
CGCAGATGACTGCTATGCTCGCCATGACACAGCACCGACGCAGGAAGGTG
CCTATCATTATGCATAATGAAAGTGAACAGGCAAGGACCTGGAGTCAGAT
CTTCAGCGAAGACACCATGAAGCAGTCCATTCCCGTTGTAACAGCTTGGC
AATTGAATGAAAGAATGTATGGGGAAT
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