FC876330
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.449e-20 Identity = 41/104 (39.42%), Postives = 52/104 (50.00%), Query Frame = 2 Query: 230 NETISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDS 541 ++ IS FE RN A GF+ Y++FITAT + FGTTG + KEI AFLA +T+ G+ A GP +WG CYN E YC S Sbjct: 2 SQNISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFA--AFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASS 103 HSP 2 Score: 43.1282 bits (100), Expect = 1.449e-20 Identity = 16/27 (59.26%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 +PC PG +Y+ RG I I +NYNYGA G Sbjct: 106 WPCAPGKKYFGRGPIQISYNYNYGAAG 132
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 1.870e-20 Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 2 Query: 263 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDS 541 QF++ RN A GF+ Y +FITA + GFGTTG + KE+ AF +T+ G+ A GP +WG C+ E +P+ YC+ S Sbjct: 94 QFDDMLKHRNDAACPARGFYTYNAFITAAKSFP--GFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPS 184 HSP 2 Score: 42.3578 bits (98), Expect = 1.870e-20 Identity = 15/28 (53.57%), Postives = 18/28 (64.29%), Query Frame = 1 Query: 550 TYPCTPGAEYYARGAIPIYWNYNYGATG 633 T+PC G YY RG + + WNYNYG G Sbjct: 186 TWPCASGKRYYGRGPMQLSWNYNYGLCG 213
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.533e-19 Identity = 36/93 (38.71%), Postives = 49/93 (52.69%), Query Frame = 2 Query: 263 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDS 541 QF++ RN A GF+ Y +FI A + GFGTTG + KEI AF +T+ G+ A GP +WG C+ E +PS +YC S Sbjct: 79 QFDDMLKHRNDNACPARGFYTYDAFINAAKSFP--GFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPS 169 HSP 2 Score: 40.4318 bits (93), Expect = 1.533e-19 Identity = 14/27 (51.85%), Postives = 17/27 (62.96%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 +PC G YY RG + + WNYNYG G Sbjct: 172 WPCASGKSYYGRGPMQLSWNYNYGQCG 198
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.009e-19 Identity = 34/92 (36.96%), Postives = 49/92 (53.26%), Query Frame = 2 Query: 266 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDS 541 F+ RN P A GF+ Y +F+ A + FGTTG+ + +E+ AFL +T+ G+ A GP AWG C+ E +PS +YC S Sbjct: 11 FDQMLKHRNNPACPAKGFYTYDAFLAAAKSFP--SFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPS 100 HSP 2 Score: 45.8246 bits (107), Expect = 2.009e-19 Identity = 16/27 (59.26%), Postives = 18/27 (66.67%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 YPC PG YY RG + + WNYNYG G Sbjct: 103 YPCAPGKSYYGRGPLQLSWNYNYGPCG 129
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.385e-19 Identity = 38/95 (40.00%), Postives = 48/95 (50.53%), Query Frame = 2 Query: 266 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYN 547 F RN A GF+ Y +FI A + F TTG + + +EI AFLA +T+ G G A GP AWG CYN E++P SYC N Sbjct: 83 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPN 175 HSP 2 Score: 44.669 bits (104), Expect = 4.385e-19 Identity = 15/27 (55.56%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 YPC PG +Y+ RG + + WNYNYG G Sbjct: 176 YPCAPGKQYFGRGPMQLSWNYNYGQCG 202
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 4.392e-19 Identity = 38/95 (40.00%), Postives = 48/95 (50.53%), Query Frame = 2 Query: 266 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYN 547 F RN A GF+ Y +FI A + F TTG + + +EI AFLA +T+ G G A GP AWG CYN E++P SYC N Sbjct: 61 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPN 153 HSP 2 Score: 44.669 bits (104), Expect = 4.392e-19 Identity = 15/27 (55.56%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 YPC PG +Y+ RG + + WNYNYG G Sbjct: 154 YPCAPGKQYFGRGPMQLSWNYNYGQCG 180
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.257e-18 Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 2 Query: 266 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCD 535 + + F ++ A GF+ Y SF+ A ++ F TG + +E+ AFLA + +T+ G+ A GP AWGLCY E++P SYCD Sbjct: 58 YASLFLHKDDAACPARGFYTYASFVRAATRFPR--FAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCD 145 HSP 2 Score: 41.5874 bits (96), Expect = 1.257e-18 Identity = 15/27 (55.56%), Postives = 18/27 (66.67%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 +PC PG Y+ RG I I WN+NYG G Sbjct: 151 WPCYPGKSYHGRGPIQISWNFNYGPAG 177
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 3.583e-18 Identity = 34/89 (38.20%), Postives = 45/89 (50.56%), Query Frame = 2 Query: 266 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYC 532 F+ RN A GF+ Y +FI A Y FG TG + +EI AFL +T+ G+ A GP AWG C+ E +PS +YC Sbjct: 85 FDQMLKHRNDGACPAKGFYTYDAFIAAAKAYP--SFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-TYC 170 HSP 2 Score: 46.595 bits (109), Expect = 3.583e-18 Identity = 17/27 (62.96%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 +PC PG +YY RG I I WNYNYG G Sbjct: 176 FPCAPGQQYYGRGPIQISWNYNYGQCG 202
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 4.660e-18 Identity = 34/89 (38.20%), Postives = 45/89 (50.56%), Query Frame = 2 Query: 266 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYC 532 F+ RN A GF+ Y +FI A Y FG TG + +EI AFL +T+ G+ A GP AWG C+ E +PS +YC Sbjct: 84 FDQVLKHRNDGACPAKGFYTYDAFIAAAKAYP--SFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-AYC 169 HSP 2 Score: 46.595 bits (109), Expect = 4.660e-18 Identity = 17/27 (62.96%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 +PC PG +YY RG I I WNYNYG G Sbjct: 175 FPCAPGQQYYGRGPIQISWNYNYGQCG 201
BLAST of FC876330 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.922e-18 Identity = 35/102 (34.31%), Postives = 50/102 (49.02%), Query Frame = 2 Query: 236 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDS 541 ++S QF+ RN A GF+ Y +F+ A + GFGTTG+ + +E+ AFLA +T+ G+ A G AWG C+ E S YC S Sbjct: 24 SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFP--GFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPS 123 HSP 2 Score: 40.0466 bits (92), Expect = 7.922e-18 Identity = 15/27 (55.56%), Postives = 17/27 (62.96%), Query Frame = 1 Query: 553 YPCTPGAEYYARGAIPIYWNYNYGATG 633 +PC PG YY RG I + NYNYG G Sbjct: 126 WPCAPGKRYYGRGPIQLSHNYNYGPAG 152 The following BLAST results are available for this feature:
BLAST of FC876330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876330 ID=FC876330; Name=FC876330; organism=Citrus clementina; type=EST; length=634bpback to top |