FC876363

Overview
NameFC876363
Unique NameFC876363
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10260 contig Ccv1_Contig10260:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 414.461 bits (1064), Expect = 2.817e-115
Identity = 207/214 (96.73%), Postives = 209/214 (97.66%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            MATV+E RNAQRADGPATVLAIGT TPAHSVNQADYPDYYFRITKSEHMTELKEKFKRM DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDI VVEVPKLGKEAATKAIKEWGQPK+KITHLIFCTTSGVDM GADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL
Sbjct:    1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 2.554e-108
Identity = 194/212 (91.51%), Postives = 200/212 (94.34%), Query Frame = 1
Query:   64 TVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            TV E R AQRADGPA VLAIGT TPA+ V QADYPDYYFRITKSEHMTELKEKFKRM DKSMI+KRYMYLTE+ILKENPNMCAYMAPSLDARQDI VVEVPKLGKEAA KAIKEWGQPK+KITHLIFCTTSGVDM G DYQLTKL+GLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGPADTHLDSLVGQAL
Sbjct:    5 TVEEIRKAQRADGPAAVLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIRKRYMYLTEDILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 216          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS3_RUTGR (Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 7.430e-108
Identity = 193/212 (91.04%), Postives = 200/212 (94.34%), Query Frame = 1
Query:   64 TVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            TV E R AQRADGPATVLAIGT TPA+ V QADYPDYYFRITKSEHMT+LKEKFKRM DKSMI+KRYM+LTEEILKENPNMCAYMAPSLDARQDI VVEVPKLGKEAA KAIKEWGQPK+KITHLIFCTTSGVDM G DYQLTKL+GLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP DTHLDSLVGQAL
Sbjct:    5 TVEEIRKAQRADGPATVLAIGTATPANYVTQADYPDYYFRITKSEHMTDLKEKFKRMCDKSMIRKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAAKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPVDTHLDSLVGQAL 216          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 4.816e-107
Identity = 192/212 (90.57%), Postives = 199/212 (93.87%), Query Frame = 1
Query:   64 TVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            TV   R AQRADGPA VLAIGT TPA+ V QADYPDYYFRITKSEHMTELKEKFKRM DKSMI+KRYM+LTE+ILKENPNMCAYMAPSLDARQDI VVEVPKLGKEAA KAIKEWGQPK+KITHLIFCTTSGVDM G DYQLTKL+GLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGPADTHLDSLVGQAL
Sbjct:    5 TVEAIRKAQRADGPAAVLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIRKRYMHLTEDILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 216          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 386.341 bits (991), Expect = 8.215e-107
Identity = 191/214 (89.25%), Postives = 199/214 (92.99%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            MA+V E R AQRA GPATVLAIGT TP++ + QADYPDYYFRITKS+HMTELKEKFKRM DKSMIKKRYMYL EEIL ENPNMCAYMAPSLDARQ I VVEVPKLGKEAATKAIKEWGQPK+KITHL+FCTTSGVDM GADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQAL
Sbjct:    1 MASVEEIRKAQRAHGPATVLAIGTATPSNCITQADYPDYYFRITKSDHMTELKEKFKRMCDKSMIKKRYMYLNEEILNENPNMCAYMAPSLDARQTIVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 3.122e-106
Identity = 189/214 (88.32%), Postives = 201/214 (93.93%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M +V E RNAQRA+GPATV+AIGT TP + V+Q+ YPDYYFRIT SEHMTELKEKFKRM DKSMIKKRYMYL EEILKENP++CAYMAPSLDARQD+ VVEVPKLGKEAATKAIKEWGQPK+KITHLIFCTTSGVDM GADYQLTKL+GLRPSVKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQAL
Sbjct:    1 MVSVEEIRNAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 1.549e-105
Identity = 188/214 (87.85%), Postives = 200/214 (93.46%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M +V E R AQRA+GPATV+AIGT TP + V+Q+ YPDYYFRIT SEHMTELKEKFKRM DKSMIKKRYMYL EEILKENP++CAYMAPSLDARQD+ VVEVPKLGKEAATKAIKEWGQPK+KITHLIFCTTSGVDM GADYQLTKL+GLRPSVKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQAL
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 3.451e-105
Identity = 187/214 (87.38%), Postives = 200/214 (93.46%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M +V E R AQRA+GPATV+AIGT TP + V+Q+ YPDYYFRIT SEHMTELKEKFKRM DKSMIKKRYMYL EEILKENP++CAYMAPSLDARQD+ V+EVPKLGKEAATKAIKEWGQPK+KITHLIFCTTSGVDM GADYQLTKL+GLRPSVKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQAL
Sbjct:    1 MVSVEEIRQAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVMEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS2_SOYBN (Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 3.451e-105
Identity = 187/214 (87.38%), Postives = 200/214 (93.46%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M +V E R AQRA+GPATV+AIGT TP + V+Q+ YPDYYFRIT SEHMTELKEKFKRM DKSMIKKRYMYL EEILKENP++CAYMAPSLDARQD+ V+EVPKLGKEAATKAIKEWGQPK+KITHLIFCTTSGVDM GADYQLTKL+GLRPSVKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQAL
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVMEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 4.507e-105
Identity = 187/214 (87.38%), Postives = 199/214 (92.99%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M TV E R AQRA+GPATV+AIGT TP + V+Q+ YPDYYFRIT SEH TELKEKF+RM DKSMIKKRYMYLTEEILKENPN+CAYMAPSLDARQD+ VVEVPKLGKEAATKAIKEWGQPK+KITHL+FCTTSGVDM GADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+D HLDSLVGQAL
Sbjct:    1 MVTVEEVRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMYLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDAHLDSLVGQAL 214          
The following BLAST results are available for this feature:
BLAST of FC876363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS2_CITSI2.817e-11596.73Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHS2_RUTGR2.554e-10891.51Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]
CHS3_RUTGR7.430e-10891.04Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=... [more]
CHS1_RUTGR4.816e-10790.57Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]
CHSY_BETVE8.215e-10789.25Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]
CHS3_SOYBN3.122e-10688.32Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]
CHS1_SOYBN1.549e-10587.85Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
CHS5_SOYBN3.451e-10587.38Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS2_SOYBN3.451e-10587.38Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV... [more]
CHS2_CAMSI4.507e-10587.38Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]

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Properties
Property NameValue
Genbank descriptionC32003H06EF DevOvary1 Citrus clementina cDNA clone C32003H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876363 ID=FC876363; Name=FC876363; organism=Citrus clementina; type=EST; length=700bp
GAGTGCACACTCACCAAGCACGAGCCACATACATATTCATTAAGGGTTCA
ACTTGAAATGGCAACCGTTCGAGAGAGCAGAAACGCTCAGCGTGCCGACG
GGCCGGCCACCGTCCTCGCCATCGGAACGGGCACGCCTGCCCACAGTGTC
AACCAGGCTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGAGCA
TATGACGGAGCTTAAAGAGAAGTTCAAGCGCATGTGGGACAAGTCGATGA
TTAAGAAGCGTTACATGTACTTGACGGAAGAGATTTTGAAGGAAAACCCC
AACATGTGCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACATTGA
GGTGGTCGAAGTGCCAAAGCTCGGGAAAGAAGCTGCTACAAAGGCCATCA
AAGAATGGGGCCAGCCCAAGACTAAGATCACCCACCTCATCTTCTGCACC
ACCTCCGGGGTCGACATGACCGGAGCCGACTACCAGCTCACCAAACTGAT
CGGTCTGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGATGTT
TCGCCGGCGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAACAAC
AAGGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCAGTCACTTT
CCGCGGNCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAGGCTTTGT
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