FC876372

Overview
NameFC876372
Unique NameFC876372
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14609 contig Ccv1_Contig14609:337..1046. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.780e-56
Identity = 112/199 (56.28%), Postives = 138/199 (69.35%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            D+   +A QL+  +VLPM ++   EL + EI+ K GPGA L  SDIA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L SV K+   N+DGV + PL  MNQDKVL+ESW  LKDAILEGGIPFN+A+G+  FEY G DPRFNK FN  M +++ + M  ILESYKGF+ +  LVDVGG  G  +
Sbjct:   16 DEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVV 214          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56
Identity = 104/204 (50.98%), Postives = 144/204 (70.59%), Query Frame = 2
Query:   44 VDGERDQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            ++ + +++F +A QL   +VLPM +++  EL + E++ K G GA +  +++AAQLLT N +A +MLDRILRLL SY+++EC L      G +RLY L  V K+   N+DGV + PL  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G DPRFNK FN  M N++++ M  ILE+Y GFD +K +VDVGG  G TL
Sbjct:   10 INSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATL 213          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56
Identity = 109/201 (54.23%), Postives = 143/201 (71.14%), Query Frame = 2
Query:   53 ERDQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            E +++   A +L   +VLPM +++  EL + E++ K GPGA +  S++AAQL T+N DAP+MLDRILRLLASYSV+ C+L      G  RLYSL  V K+   N+DGV +  LL MNQDKVL+ESW  LKDA+LEGGIPFN+A+G+  FEY G DPRFNK FN  M N+++++M  ILE Y+GF  +K +VDVGG  G TL
Sbjct:   15 EEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATL 215          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.357e-55
Identity = 105/199 (52.76%), Postives = 141/199 (70.85%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +++  +A  L   +VLPM +++  EL + E++ K GPGA +  S++AAQL T N +AP+MLDRILRLLA+YSV++C L+     G  RLY L  V K+   N DGV + PLL MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G DPRFNK FN  M N++++ M  ILE Y+GF+ +K +VDVGG  G TL
Sbjct:    4 EEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATL 202          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 3.357e-55
Identity = 105/199 (52.76%), Postives = 140/199 (70.35%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            D++F +A QL   +VLPM +++  EL + EI+ K GPGA +  S++AAQL TKN +AP+MLDR+LRLLA+YSV+ C+L         RLYSL  V K    N DGV + PLL MNQDKVL+ESW  L DA+L+GG+PFN+A+G+  FEY G DPRFNK FN  M +++++ M  ILE YKGF+ +  +VDVGG  G T+
Sbjct:   13 DEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATV 211          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.769e-55
Identity = 108/199 (54.27%), Postives = 138/199 (69.35%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +++  +A QL   +VLPM ++   EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L  V K+   N+DGV + PL  MNQDKVL+ESW  LKDAILEGGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  ILE+YKGF+ +  LVDVGG  G  +
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVV 215          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.769e-55
Identity = 105/199 (52.76%), Postives = 139/199 (69.85%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            D++F +A QL   +VLPM ++A  EL + EI+ K GPGA +  S++AAQL TKN +AP+MLDR+ RLLA+YSV+ C+L         RLYSL  V K+   N DGV + P+L MNQDKVL+ESW  L DA+L+GG+PFN+A+G+  FEY G DPRFNK FN  M ++T+L M  ILE Y GF+ +  +VDVGG  G T+
Sbjct:   13 DEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATV 211          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.276e-54
Identity = 110/199 (55.28%), Postives = 137/199 (68.84%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            D+   +A QL+  +VLPM ++   EL + EI+ K GPGA L  SDIA+ L TKN +AP+MLDRILRLLASYS++ CSL         RLY L SV K+   N+DGV + PL  MNQDKVL+ESW  LKDAILEGGIPFN+A+G+  FEY G DPRFNK FN  M  ++ + M  ILE+YKGF+ +  LVDVGG  G  +
Sbjct:   16 DEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVV 214          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.176e-54
Identity = 107/199 (53.77%), Postives = 138/199 (69.35%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +++  +A QL   +VLPM ++   EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L  V K+   N+DGV + PL  MNQDKVL+ESW  LKDAIL+GGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  ILE+YKGF+ +  LVDVGG  G  +
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVV 215          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.842e-54
Identity = 103/204 (50.49%), Postives = 140/204 (68.63%), Query Frame = 2
Query:   44 VDGERDQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            ++ + +++F +A QL   +VLPM +++  EL + E++ K G GA +   D+AAQL T N DA +MLDRILRLL SY+++EC L      G  RLY L  V K+   N+DGV + PL  MNQDKVL+ESW  L DA+++GGIPFN+A+G+  FEY G DPRFNK FN  M N++++ M  ILE+Y GFD +K +VDVGG  G TL
Sbjct:   10 INSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATL 213          
The following BLAST results are available for this feature:
BLAST of FC876372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT3_POPKI1.780e-5656.28Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT2_OCIBA8.835e-5650.98Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_CATRO8.835e-5654.23Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_COFCA3.357e-5552.76Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_CAPAN3.357e-5552.76Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_POPKI9.769e-5554.27Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_CAPCH9.769e-5552.76Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT2_POPTM1.276e-5455.28Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_POPTM2.176e-5453.77Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_OCIBA2.842e-5450.49Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]

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Properties
Property NameValue
Genbank descriptionC32004A05EF DevOvary1 Citrus clementina cDNA clone C32004A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876372 ID=FC876372; Name=FC876372; organism=Citrus clementina; type=EST; length=710bp
GAAAGCGTACAAGAAATTCAAGATCTTTAAAATGGATTCTATAGTTGATG
GAGAAAGAGACCAAAGCTTTGCATATGCTAGTCAATTGGTGATGGGTACA
GTGCTACCCATGGCCATTCAAGCGGTGTATGAGCTGGGCATTTTCGAGAT
CCTAGACAAAGTTGGTCCTGGTGCAAAGCTCTGTGCTTCAGATATTGCAG
CCCAATTGCTTACCAAGAACAAAGACGCACCCATGATGCTGGATCGGATT
CTCAGGCTTCTGGCTAGCTACAGTGTTGTTGAATGCTCACTTGATGCTTC
TGGTGCTCGGAGACTATATAGTTTGAATTCTGTCTCCAAATACTATGTGC
CTAACAAAGATGGCGTCTTACTAGGCCCCCTATTACAAATGAATCAGGAC
AAGGTCCTTCTGGAAAGCTGGTCCCAACTCAAAGATGCTATTCTTGAAGG
AGGAATTCCATTTAATCGAGCCCATGGAGTGCATGTATTTGAGTACGCAG
GATTGGACCCTAGGTTCAATAAACATTTTAACACAGCAATGTATAACTAT
ACCTCCCTGGTTATGAGCAACATTCTTGAATCTTACAAGGGCTTCGACAA
CATCAAGCAACTGGTCGATGTTGGTGGCAGTCTCGGTGTTACTCTTCAGC
CATCACTACCAGTACCCCTATATTAGGGCATCATTTCGACAGCCTCATGT
TATGACATGC
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