FC876391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: DR100_ARATH (DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.466e-57 Identity = 106/181 (58.56%), Postives = 136/181 (75.14%), Query Frame = 1 Query: 112 AQLLLIFLAXXXXXXNCCPPSERAALLAFKAALHEPYLGIFNSWTGN-DCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDL 651 + LL + CC P ++ AL AFK++L EP LGIFN+W+ N DCC WYG+SCD ++ RV DI+LRGESED IFQ+A R+GYM+G I PAVC LT L+SL LADWKGITGEIP CI+S+ LRILDL GNK++G+IP +IG+L +LAVLN+A+N +SG IP S+ +L L HL+L Sbjct: 10 SSLLAVVFISVISVVRCCSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISLRGESEDAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCITSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLEL 190
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera GN=pgip PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18 Identity = 61/184 (33.15%), Postives = 89/184 (48.37%), Query Frame = 1 Query: 109 TAQLLLIFLAXXXXXX--NCCPPSERAALLAFKAALHEPYLGIFNSWTGNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSL--MHLD 648 ++ LLL+ LA C P ++ LL K AL PY I SW N C WY V CD THR+ + + +G ++G I AV L L +L +TG+IP I+ + L+++ L LSG +P L L L+++ NN+SG IP S++ L +L +HLD Sbjct: 10 SSSLLLVLLATRPCPSLSERCNPKDKKVLLQIKKALDNPY--ILASWNPNTDCCGWYCVECDLTTHRINSLTIF-------------SGQLSGQIPDAVGDLPFLETLIFRKLSNLTGQIPPAIAKLKHLKMVRLSWTNLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGALHLD 178
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: PGIP1_ORYSJ (Polygalacturonase inhibitor 1 OS=Oryza sativa subsp. japonica GN=FOR1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18 Identity = 62/193 (32.12%), Postives = 98/193 (50.78%), Query Frame = 1 Query: 85 MGGCVSFYTAQLLLIFLAXXXXXXNCCPPSERAALLAFKAALHEPYLGIFNSWTGNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNTE 663 M SF A LL + +A CPPS++ AL+ K +L P S DCC W V CD E RV ++ + G ++ + G I AV LT L SL+L G++G IP C++++ L+ L + +SG IP + R+ L ++++ N+++G IP S ++L +L LDLR+ + Sbjct: 1 MASTASFMLAVLLAVAVAAAPARAVRCPPSDKQALMRVKQSLGNPATLSTWSLASADCC-EWDHVRCD-EAGRVNNVFIDGAND------------VRGQIPSAVAGLTALMSLSLFRLPGLSGPIPACLTALSNLQFLTISHTNVSGVIPDSLARIRSLDSVDLSHNSLTGPIPNSFSDLPNLRSLDLRSNK 179
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 7.361e-17 Identity = 58/163 (35.58%), Postives = 85/163 (52.15%), Query Frame = 1 Query: 169 PSERAALLAFKAALHEPYLGIFNSWTGNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRN 657 P E AL K +L++P + N G+ C NW GV C T D SE +F ++G +SP + +L+RL+ L+ W ITG IP+ I +I L +L L GN L+G++P ++G L L + I +N ISG +P S ANL+ H + N Sbjct: 35 PVEVRALRVIKESLNDPVHRLRNWKHGDPCNSNWTGVVCFNST---LDDGYLHVSELQLFSMN-----LSGNLSPELGRLSRLTILSFM-WNKITGSIPKEIGNIKSLELLLLNGNLLNGNLPEELGFLPNLDRIQIDENRISGPLPKSFANLNKTKHFHMNN 188
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: PGIP2_ARATH (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana GN=PGIP2 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 56/185 (30.27%), Postives = 82/185 (44.32%), Query Frame = 1 Query: 118 LLLIFLAXXXXXXNCCPPSERAALLAFKAALHEPYLGIFNSWTGNDCCHNWYGVSCDQET--HRVADINLR-GESEDPIFQRAHRTGYMT-----------GYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLS 630 LL L + C ++ LL K +L+ PY SW C +WY + C T HRV + ++ GE I Y+T G+I P + KL L+ L L+ W +TG +P +S + L +DL N LSG IP + L +L L ++ N ++G IP S S Sbjct: 10 LLSTLLLTTSLAKDLCHKDDKTTLLKIKKSLNNPYH--LASWDPKTDCCSWYCLECGDATVNHRVTSLIIQDGEISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLS-WTNLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESFGTFS 191
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: EFR_ARATH (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15 Identity = 56/190 (29.47%), Postives = 87/190 (45.79%), Query Frame = 1 Query: 172 SERAALLAFKAALHEPYLG-IFNSWTGNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLAD-----------------------WKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNTEFR 669 ++ ALL FK+ + E + SW + NW GV+C + RV +NL G +TG ISP++ L+ L L LAD + + G IP +S+ L +DL N L +P ++G L +LA+L+++ NN++G P S+ NL+SL LD + R Sbjct: 30 TDMQALLEFKSQVSENNKREVLASWNHSSPFCNWIGVTCGRRRERVISLNLGGFK-------------LTGVISPSIGNLSFLRLLNLADNSFGSTIPQKVGRLFRLQYLNMSYNLLEGRIPSSLSNCSRLSTVDLSSNHLGHGVPSELGSLSKLAILDLSKNNLTGNFPASLGNLTSLQKLDFAYNQMR 206
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15 Identity = 58/200 (29.00%), Postives = 89/200 (44.50%), Query Frame = 1 Query: 106 YTAQLLLIFLAXXXXXXNCCPPSERAALLAFKAALHEPYLGIFNSWTGNDCCH--NWYGVSCDQ------ETHRVADINLRGESEDPIFQRAHRTGY---MTGYISPAVCKLTRLSSLTLADWKG--ITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNTEF 666 ++ L L F + E LL FKA+ +P G + W H NW G++C + + + +NL GE D I + T + + P +L+R +L + I G IP IS L+++D N + G IP D+G L L VLN+ N ++G +PP+I LS L+ LDL + Sbjct: 9 FSISLALTFFFFFTKTFSFTENEELGNLLRFKASFDDPK-GSLSGWFNTSSSHHCNWTGITCTRAPTLYVSSINLQSLNLSGEISDSICDLPYLTHLDLSLNFFNQPIPLQLSRCVTLETLNLSSNLIWGTIPDQISEFSSLKVIDFSSNHVEGMIPEDLGLLFNLQVLNLGSNLLTGIVPPAIGKLSELVVLDLSENSY 207
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: PGIP_PYRCO (Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.999e-15 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 1 Query: 163 CPPSERAALLAFKAALHEPYLGIFNSWTGNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDL 651 C P ++ LL K A +PY + SW + C +WY V+CD T+R+ + + G ++G I V L L +L +TG I I+ + L+ L L LSG +P + +L L L+++ NN++GAIP S++ L +L L L Sbjct: 27 CNPDDKKVLLQIKKAFGDPY--VLASWKSDTDCCDWYCVTCDSTTNRINSLTIFA-------------GQVSGQIPALVGDLPYLETLEFHKQPNLTGPIQPAIAKLKGLKSLRLSWTNLSGSVPDFLSQLKNLTFLDLSFNNLTGAIPSSLSELPNLGALRL 174
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: PGIP3_PHAVU (Polygalacturonase inhibitor 3 OS=Phaseolus vulgaris GN=PGIP3 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14 Identity = 63/191 (32.98%), Postives = 87/191 (45.55%), Query Frame = 1 Query: 118 LLLIFLAXXXXXXNCCPPSERAALLAFKAALHEPYLGIFNSWTGN-DCCHN-WYGVSCDQET--HRVADINLRGESED---PIFQRAHRTGYMT-----------GYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSL 636 +L+I ++ C P ++ ALL K L P +SW DCC+ W GV CD +T +RV +++L G + PI Y+ G I PA+ KLT+L L + ++G IP +S I L LD N LSG +P I L L + N ISGAIP S + S L Sbjct: 17 ILVILVSLRTALSELCNPQDKQALLQIKKDLGNPTT--LSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITH-TNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL 204
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: PGIP1_PHAVU (Polygalacturonase inhibitor 1 OS=Phaseolus vulgaris GN=PGIP1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14 Identity = 63/191 (32.98%), Postives = 87/191 (45.55%), Query Frame = 1 Query: 118 LLLIFLAXXXXXXNCCPPSERAALLAFKAALHEPYLGIFNSWTGN-DCCHN-WYGVSCDQET--HRVADINLRGESED---PIFQRAHRTGYMT-----------GYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSL 636 +L+I ++ C P ++ ALL K L P +SW DCC+ W GV CD +T +RV +++L G + PI Y+ G I PA+ KLT+L L + ++G IP +S I L LD N LSG +P I L L + N ISGAIP S + S L Sbjct: 17 ILVILVSLRTALSELCNPQDKQALLQIKKDLGNPTT--LSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITH-TNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLGGITFDGNRISGAIPDSYGSFSKL 204 The following BLAST results are available for this feature:
BLAST of FC876391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876391 ID=FC876391; Name=FC876391; organism=Citrus clementina; type=EST; length=677bpback to top |